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The map label for this gene is cobC [C]

Identifier: 183222288

GI number: 183222288

Start: 3038946

End: 3039542

Strand: Direct

Name: cobC [C]

Synonym: LEPBI_I2940

Alternate gene names: 183222288

Gene position: 3038946-3039542 (Clockwise)

Preceding gene: 183222287

Following gene: 183222294

Centisome position: 84.42

GC content: 39.36

Gene sequence:

>597_bases
ATGGATCTCTATTTAATTCGCCATCCAGAAACCATAGCACCCAAAGGCACTTGTTACGGGCGAACTGATTTTCCACTCAA
ATACCCTGTAGAAGACACTGCAGAAACTACATTCGCCCATCTACCACCTAACTTTGATCATTTAGTAGTTAGCCCTGCTC
CACGTGCTGTTAAATTGGCAAACGCATTACTTTCTAAATACAATCCAAATGAAAATGCTTATCATACCCAATTGAATAGA
GACGAACGATTGTTAGAAATGGATTTTGGGGATTGGGATGGAAAACTTTGGGAAGAAATTCCGAGAAAAGATACAATCCC
TTGGATGAAAGATTTTGTGAATGCCAGAACTCCCAATGGGGAAGCTTTTACTGACTTAATCAAAAGAGTGGATCAGTTTT
TAGATGATTGGAAAACCCATGGAGCTTTACGCGAAAACTGGGAAAAGACAAACAAACAAAAATTAAATGTAATGATTGTT
GTCTGCCATTCTGGTCCTATTCGAGCCATACTTTGTCGGCTCCAAGGAATTCCACATGAGGAAGCATTTAAGTCCCCTGT
GGATTTTGGTTCTGTTCACAAACTAGAAATCACTTAA

Upstream 100 bases:

>100_bases
TTTCGCTCATGAAACGATGGATCCAAGGATTCACTGGTGATTGTTTGGGGGCTGTCCAACAAGTTGTGGAAACTTGCATT
TGGATCTCTGGAGTATTTGT

Downstream 100 bases:

>100_bases
CAGACAACTGTTTCCTAAACGAATCTAAAGGCTTATACCTTCTTTTTTTCACCTAACGGGCCTAATTTGGCGAGTATCAG
TTCATTTACAAGTTTTGGAT

Product: putative phosphoglycerate/bisphosphoglycerate mutase

Products: 3-phospho-D-glycerate

Alternate protein names: Alpha-Ribazole Phosphatase; Phosphoglycerate/Bisphosphoglycerate Mutase; Phosphoglycerate Mutase Family Protein; Phosphoglycerate Mutase Family; Alpha-Ribazole-5-Phosphate Phosphatase; Alpha-Ribazole-5-Phosphate Phosphohydrolase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDLYLIRHPETIAPKGTCYGRTDFPLKYPVEDTAETTFAHLPPNFDHLVVSPAPRAVKLANALLSKYNPNENAYHTQLNR
DERLLEMDFGDWDGKLWEEIPRKDTIPWMKDFVNARTPNGEAFTDLIKRVDQFLDDWKTHGALRENWEKTNKQKLNVMIV
VCHSGPIRAILCRLQGIPHEEAFKSPVDFGSVHKLEIT

Sequences:

>Translated_198_residues
MDLYLIRHPETIAPKGTCYGRTDFPLKYPVEDTAETTFAHLPPNFDHLVVSPAPRAVKLANALLSKYNPNENAYHTQLNR
DERLLEMDFGDWDGKLWEEIPRKDTIPWMKDFVNARTPNGEAFTDLIKRVDQFLDDWKTHGALRENWEKTNKQKLNVMIV
VCHSGPIRAILCRLQGIPHEEAFKSPVDFGSVHKLEIT
>Mature_198_residues
MDLYLIRHPETIAPKGTCYGRTDFPLKYPVEDTAETTFAHLPPNFDHLVVSPAPRAVKLANALLSKYNPNENAYHTQLNR
DERLLEMDFGDWDGKLWEEIPRKDTIPWMKDFVNARTPNGEAFTDLIKRVDQFLDDWKTHGALRENWEKTNKQKLNVMIV
VCHSGPIRAILCRLQGIPHEEAFKSPVDFGSVHKLEIT

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.2.1

Molecular weight: Translated: 22851; Mature: 22851

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLYLIRHPETIAPKGTCYGRTDFPLKYPVEDTAETTFAHLPPNFDHLVVSPAPRAVKLA
CCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEECCCCHHHHHH
NALLSKYNPNENAYHTQLNRDERLLEMDFGDWDGKLWEEIPRKDTIPWMKDFVNARTPNG
HHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCC
EAFTDLIKRVDQFLDDWKTHGALRENWEKTNKQKLNVMIVVCHSGPIRAILCRLQGIPHE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCHH
EAFKSPVDFGSVHKLEIT
HHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MDLYLIRHPETIAPKGTCYGRTDFPLKYPVEDTAETTFAHLPPNFDHLVVSPAPRAVKLA
CCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEECCCCHHHHHH
NALLSKYNPNENAYHTQLNRDERLLEMDFGDWDGKLWEEIPRKDTIPWMKDFVNARTPNG
HHHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCC
EAFTDLIKRVDQFLDDWKTHGALRENWEKTNKQKLNVMIVVCHSGPIRAILCRLQGIPHE
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCHH
EAFKSPVDFGSVHKLEIT
HHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-phospho-D-glycerate

Specific reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA