| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222084
Identifier: 183222084
GI number: 183222084
Start: 2819333
End: 2820253
Strand: Direct
Name: 183222084
Synonym: LEPBI_I2726
Alternate gene names: NA
Gene position: 2819333-2820253 (Clockwise)
Preceding gene: 183222083
Following gene: 183222085
Centisome position: 78.32
GC content: 47.56
Gene sequence:
>921_bases ATGGAAAGGAAACATCTTTTAGCCTCCACGTCTCTTCTCGTACTCTTCGTACTAATACTAACCAACTGTAAACCCAAATC AGATTCTGATGAAGAAACCTTGCTTCTGTTAGCTGCCGCAGCTTCCACTCGGATTTGTGCCAATTCCTCATTTACGGGGA CGACGGTTGTAAATTCCACTGCCACCTTAAATGCGAGTACCGATTGTATCACAGGAATGACTTCCTCCATGTCGGCGGAC CTCCCCGCTTGGATCCGAAACAATTTTAAATGTGCCGTCGGTTCTGTTTCGGGCAGTAATTATGTATTCCGTTCGCAAAA TGTTCCAAATAACAAAAGTTATTATTTTGGATCTTCTTCCCCTATGTACGAAGCCCTAGCTGGTGGCCAAACTCCTGCAG GGAATAACCAAATCCAATCTCAGTGTTTGGTGTATTCCATCCCGAGTGTTCCGGCAGAAAAGACAGGCACCAAAACAGGA ACCCAAAGTGGCTATGTCTCTGTGGGGATTACGGTGAATGGACTTGCGATCTTCAATAATGCGGCCGCACCAGGGGACAC ATTGGCTTCGGAAGTGTCCACCTTTGATAAGTTCAACGGCCACCCGCAAACGTCTGGGGTCTACCACCACCATGCCCAAC CACTCAATGTTTCCAATAATAATGCCAATTTGATTGGTGTCCTCTTGGATGGGTTCCCGGTTTACGGACAACTTTGTGAC GGTGGCACTGCTGATACGGGAAATGATGCCGCACCTGGTACGGGAACACCAATTCTTGATGCCAACCATGGCCATACGGC AAATACCGTTTTGTTCCCGGGCGGAATTTACCATTACCATTATGCAAATGATACCACGGCTGGGACAAATACCCTTATCG GTTCCCAATTCCACGGGACTCCAGGAACAGTTTCCAACTAA
Upstream 100 bases:
>100_bases ATACTAATCCACTATATTCGAAATTTGGAATCCAAGGAAGGCCCTGGTCACTAGGGAAATTCCTTGACAATTATTAGAAT CCTTCTACCGTAAACCCTCT
Downstream 100 bases:
>100_bases ACCTCGTTTGGTTCGAATCCTATCTCCTGTATTTTGTTTTAGCCTTCTCCTTTGTTTGTCCTGTGCCAAACAAAGGGTGG AAGTGGGGAACAAAGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MERKHLLASTSLLVLFVLILTNCKPKSDSDEETLLLLAAAASTRICANSSFTGTTVVNSTATLNASTDCITGMTSSMSAD LPAWIRNNFKCAVGSVSGSNYVFRSQNVPNNKSYYFGSSSPMYEALAGGQTPAGNNQIQSQCLVYSIPSVPAEKTGTKTG TQSGYVSVGITVNGLAIFNNAAAPGDTLASEVSTFDKFNGHPQTSGVYHHHAQPLNVSNNNANLIGVLLDGFPVYGQLCD GGTADTGNDAAPGTGTPILDANHGHTANTVLFPGGIYHYHYANDTTAGTNTLIGSQFHGTPGTVSN
Sequences:
>Translated_306_residues MERKHLLASTSLLVLFVLILTNCKPKSDSDEETLLLLAAAASTRICANSSFTGTTVVNSTATLNASTDCITGMTSSMSAD LPAWIRNNFKCAVGSVSGSNYVFRSQNVPNNKSYYFGSSSPMYEALAGGQTPAGNNQIQSQCLVYSIPSVPAEKTGTKTG TQSGYVSVGITVNGLAIFNNAAAPGDTLASEVSTFDKFNGHPQTSGVYHHHAQPLNVSNNNANLIGVLLDGFPVYGQLCD GGTADTGNDAAPGTGTPILDANHGHTANTVLFPGGIYHYHYANDTTAGTNTLIGSQFHGTPGTVSN >Mature_306_residues MERKHLLASTSLLVLFVLILTNCKPKSDSDEETLLLLAAAASTRICANSSFTGTTVVNSTATLNASTDCITGMTSSMSAD LPAWIRNNFKCAVGSVSGSNYVFRSQNVPNNKSYYFGSSSPMYEALAGGQTPAGNNQIQSQCLVYSIPSVPAEKTGTKTG TQSGYVSVGITVNGLAIFNNAAAPGDTLASEVSTFDKFNGHPQTSGVYHHHAQPLNVSNNNANLIGVLLDGFPVYGQLCD GGTADTGNDAAPGTGTPILDANHGHTANTVLFPGGIYHYHYANDTTAGTNTLIGSQFHGTPGTVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31793; Mature: 31793
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKHLLASTSLLVLFVLILTNCKPKSDSDEETLLLLAAAASTRICANSSFTGTTVVNST CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECE ATLNASTDCITGMTSSMSADLPAWIRNNFKCAVGSVSGSNYVFRSQNVPNNKSYYFGSSS EEECCCCHHHHCCCCCCCCCCCHHHHCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCC PMYEALAGGQTPAGNNQIQSQCLVYSIPSVPAEKTGTKTGTQSGYVSVGITVNGLAIFNN CHHHHHCCCCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC AAAPGDTLASEVSTFDKFNGHPQTSGVYHHHAQPLNVSNNNANLIGVLLDGFPVYGQLCD CCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECC GGTADTGNDAAPGTGTPILDANHGHTANTVLFPGGIYHYHYANDTTAGTNTLIGSQFHGT CCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCEECCCCCCC PGTVSN CCCCCC >Mature Secondary Structure MERKHLLASTSLLVLFVLILTNCKPKSDSDEETLLLLAAAASTRICANSSFTGTTVVNST CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECE ATLNASTDCITGMTSSMSADLPAWIRNNFKCAVGSVSGSNYVFRSQNVPNNKSYYFGSSS EEECCCCHHHHCCCCCCCCCCCHHHHCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCC PMYEALAGGQTPAGNNQIQSQCLVYSIPSVPAEKTGTKTGTQSGYVSVGITVNGLAIFNN CHHHHHCCCCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC AAAPGDTLASEVSTFDKFNGHPQTSGVYHHHAQPLNVSNNNANLIGVLLDGFPVYGQLCD CCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECC GGTADTGNDAAPGTGTPILDANHGHTANTVLFPGGIYHYHYANDTTAGTNTLIGSQFHGT CCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCEECCCCCCC PGTVSN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA