| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222081
Identifier: 183222081
GI number: 183222081
Start: 2817314
End: 2818447
Strand: Direct
Name: 183222081
Synonym: LEPBI_I2723
Alternate gene names: NA
Gene position: 2817314-2818447 (Clockwise)
Preceding gene: 183222080
Following gene: 183222083
Centisome position: 78.27
GC content: 39.59
Gene sequence:
>1134_bases ATGCGACCAATGGACCAAATCACAGGCAAAGAACAAAAAAACCATGTGATCTTACACTATCTCATGAATCAGGAAATGAA AGCCAGTTGGAACGGACAGGTGCAAACCATGACCGTTTTGCAAGAAGTACCTGGCGGTGAAGAGATCATCCTCCAATGGT CAGAAATTTGGCCCATCGGAGAAGGATCGACAATTGTTCTCTCTAAGTTACTCGCACGATACCTCGAACTCCATTGCGTT TTTGTCAAACAACTGGCACCTCATAAAATCCAATTGCGTGTGGAAAAAGTCCTCATCGCCAAAAAAGAAAGACTGAATCC CAGATTTTCCATCACAGAAGAAGGAATGGTCAATGTCACAAACATTGTGAGTTCTAAAACCATCATCGAAGCCAATATGT TCAATATCCCCACTCTTGTCCGAGTCAACTTTGAAGACTATCGCAAACGAATGATGGTTCGATCCGGAGAAGCGGGCACC ATGGATATTTTTAAATCTGGAATGGAACGTAAGTTTGATGTTGTTAAGTCGAGTCAAAAAATCCTTTTCATCAAAGACGC CACAAGTCCCGAAAGTTACAAAATGGATGCGGAAGGTTTTTTAAATTACGAAGATGATATCGAAGACAATGTCGACAAAC TTGCGTTTGCCGCTCGTGATAAAAAAATTAAGTCAGAACTCATTTTACCAATTCTTTACAAAAACGAATTAGAAGAAATC ATACCCATTGGTTACTACTGGTTACAAACCAAAGACAAACTCATCTCTGATGACGATTTAAAATTTTACCAAATCCAAAT TTCCGAAATGATCGAACGGATCAAAGATGCAAATCTAATGACAACGGTAGAAAAATTCCCTGTCATCGATCTTTCGACTA CTGGGCTCAAACTCCGAGTGAGTAACAGCACTTTGGTGGAAACCTTACCAAAACAAAAAGGGATTCTCCTTGAGTTAGTG TTTAAACTACAAACTCCGTTTCGATTTTTTGGGAAAATTGCTTGGGCTCACAAAGAAGAATCTGGTGATTTATTGGTTGG AGTTGAGTTTTCAGGAAAACGAACCTATGCAGAAAAAGTTCGTTTCGAAGAAAACATCGAAATCATCAAAAACAATGGTC GTACAGCGGCCTAA
Upstream 100 bases:
>100_bases ATTTATCCTTTTTCTTGCCAAAGAGATGCGTATAGTCTTTACTTTCCAATAGATGGGAAATTTATTTCCGTCTTAACATA ATAGAACTTGGAAATTAGCT
Downstream 100 bases:
>100_bases ATTTTTACCTGATTTCCAGTTTGATGGTTTTTGAGAACTTGGGAATTTCATACGCACAAACGTAGTATAACATCTTTAAG TCGATGTAATCGTACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRPMDQITGKEQKNHVILHYLMNQEMKASWNGQVQTMTVLQEVPGGEEIILQWSEIWPIGEGSTIVLSKLLARYLELHCV FVKQLAPHKIQLRVEKVLIAKKERLNPRFSITEEGMVNVTNIVSSKTIIEANMFNIPTLVRVNFEDYRKRMMVRSGEAGT MDIFKSGMERKFDVVKSSQKILFIKDATSPESYKMDAEGFLNYEDDIEDNVDKLAFAARDKKIKSELILPILYKNELEEI IPIGYYWLQTKDKLISDDDLKFYQIQISEMIERIKDANLMTTVEKFPVIDLSTTGLKLRVSNSTLVETLPKQKGILLELV FKLQTPFRFFGKIAWAHKEESGDLLVGVEFSGKRTYAEKVRFEENIEIIKNNGRTAA
Sequences:
>Translated_377_residues MRPMDQITGKEQKNHVILHYLMNQEMKASWNGQVQTMTVLQEVPGGEEIILQWSEIWPIGEGSTIVLSKLLARYLELHCV FVKQLAPHKIQLRVEKVLIAKKERLNPRFSITEEGMVNVTNIVSSKTIIEANMFNIPTLVRVNFEDYRKRMMVRSGEAGT MDIFKSGMERKFDVVKSSQKILFIKDATSPESYKMDAEGFLNYEDDIEDNVDKLAFAARDKKIKSELILPILYKNELEEI IPIGYYWLQTKDKLISDDDLKFYQIQISEMIERIKDANLMTTVEKFPVIDLSTTGLKLRVSNSTLVETLPKQKGILLELV FKLQTPFRFFGKIAWAHKEESGDLLVGVEFSGKRTYAEKVRFEENIEIIKNNGRTAA >Mature_377_residues MRPMDQITGKEQKNHVILHYLMNQEMKASWNGQVQTMTVLQEVPGGEEIILQWSEIWPIGEGSTIVLSKLLARYLELHCV FVKQLAPHKIQLRVEKVLIAKKERLNPRFSITEEGMVNVTNIVSSKTIIEANMFNIPTLVRVNFEDYRKRMMVRSGEAGT MDIFKSGMERKFDVVKSSQKILFIKDATSPESYKMDAEGFLNYEDDIEDNVDKLAFAARDKKIKSELILPILYKNELEEI IPIGYYWLQTKDKLISDDDLKFYQIQISEMIERIKDANLMTTVEKFPVIDLSTTGLKLRVSNSTLVETLPKQKGILLELV FKLQTPFRFFGKIAWAHKEESGDLLVGVEFSGKRTYAEKVRFEENIEIIKNNGRTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43480; Mature: 43480
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPMDQITGKEQKNHVILHYLMNQEMKASWNGQVQTMTVLQEVPGGEEIILQWSEIWPIG CCCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEHHCCCCC EGSTIVLSKLLARYLELHCVFVKQLAPHKIQLRVEKVLIAKKERLNPRFSITEEGMVNVT CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEECCCCCEEHH NIVSSKTIIEANMFNIPTLVRVNFEDYRKRMMVRSGEAGTMDIFKSGMERKFDVVKSSQK HHHCCCEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC ILFIKDATSPESYKMDAEGFLNYEDDIEDNVDKLAFAARDKKIKSELILPILYKNELEEI EEEEEECCCCCCEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHEEHEEEHHHHHHH IPIGYYWLQTKDKLISDDDLKFYQIQISEMIERIKDANLMTTVEKFPVIDLSTTGLKLRV CCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCCCEEHHHHCCEEEEECCCEEEEE SNSTLVETLPKQKGILLELVFKLQTPFRFFGKIAWAHKEESGDLLVGVEFSGKRTYAEKV CCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEEEEEECCCCHHHHHH RFEENIEIIKNNGRTAA CCCCCCEEEECCCCCCC >Mature Secondary Structure MRPMDQITGKEQKNHVILHYLMNQEMKASWNGQVQTMTVLQEVPGGEEIILQWSEIWPIG CCCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEHHCCCCC EGSTIVLSKLLARYLELHCVFVKQLAPHKIQLRVEKVLIAKKERLNPRFSITEEGMVNVT CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEECCCCCEEHH NIVSSKTIIEANMFNIPTLVRVNFEDYRKRMMVRSGEAGTMDIFKSGMERKFDVVKSSQK HHHCCCEEEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC ILFIKDATSPESYKMDAEGFLNYEDDIEDNVDKLAFAARDKKIKSELILPILYKNELEEI EEEEEECCCCCCEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHEEHEEEHHHHHHH IPIGYYWLQTKDKLISDDDLKFYQIQISEMIERIKDANLMTTVEKFPVIDLSTTGLKLRV CCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCCCEEHHHHCCEEEEECCCEEEEE SNSTLVETLPKQKGILLELVFKLQTPFRFFGKIAWAHKEESGDLLVGVEFSGKRTYAEKV CCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEEEEEECCCCHHHHHH RFEENIEIIKNNGRTAA CCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA