| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ygcG [H]
Identifier: 183222047
GI number: 183222047
Start: 2785847
End: 2786776
Strand: Direct
Name: ygcG [H]
Synonym: LEPBI_I2689
Alternate gene names: 183222047
Gene position: 2785847-2786776 (Clockwise)
Preceding gene: 183222046
Following gene: 183222054
Centisome position: 77.39
GC content: 44.19
Gene sequence:
>930_bases ATGAAAATGAATATCGAAACATCAAATTCAACCTCTTTGCTCAGACAAAATTTTATGTTTGTATTCGTACTTTTCACTTC TCTATGTTGTTTCTTGATTCCAATGTTTGGATATCCAGTTCCAAAACTGGAACGAAGGGTGATGGACCATGCTGGGATTT TATCTGAAGCCACCGTTACACAATTAGAATCCAATCTAAAACAGTTTGAAGCAGAAACTAGCAATCAAATTGCCGTGTAC ACCACTCCCAGTTTGCAGGACGAAACCATCGAAGGAGTGGCAATCGAAATCTTTGATGAATGGAAATTAGGACAAAAATC CAAAAACAATGGAATTTTGCTCATCATCGCCCCTAACGAACGTAAAATGAGAATTGAAGTGGGCCGAGGTCTCGAAGGGG CATTGACAGACATCCAAGCCAAACAAATCATTCGGAACGAACTCAGACCCAGTTTCAAATCTGGCGATATGGATGGTGGA GTGACTGCTGGAGTGAATGCGATTATGGCCACCATACGCGGAGAATACGCTCCTTCTGAAGATGATGTCCAAACGACAGG CCGTGATACGGCTTCCGATGTGATCCCATCCGGGATTGTCGGCGGGATTTTCACATTTATTTCCCTCTTCATACCATCGT TTGGTGGTGTGATTTTTACGATCATTGGTCTTATAGTCATTTTACCTTTGTTAACCTTTATCTTTGGTGGGACCTTTGGG TTAATCGCTGCCATCATTTTATTCGTGATCATCATGTTTCTCAGGCGCAAACTGGGCCATGGCCTTGGCGGTGGCAGTGG ATATGATGGAAGTGGGTATTACGGAGGATGGTCTTCAGGTGGAGACTCATGGTCATCAAGTGATTCCAGTGATAGTTGGT CTGGAGGTGGAGGTGATTCCGGCGGAGGTGGATCTTCGGGGGATTGGTAA
Upstream 100 bases:
>100_bases TCTTCTGTGGTGATTTACTCAAGCAGTACAATATCCATGTGGAAAAGGATGATAAAAATGAAATCTCCAATGAAATTCGA GACGGTGGGAAATTGATGTA
Downstream 100 bases:
>100_bases TCTTTATTTCAATTAGGCCAATTTATGTGAACATCTGCGATACCATACCATTCCCGTCGCAAATAGGATAGGAATGGTAG CAAAACTTTCTTTTTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKMNIETSNSTSLLRQNFMFVFVLFTSLCCFLIPMFGYPVPKLERRVMDHAGILSEATVTQLESNLKQFEAETSNQIAVY TTPSLQDETIEGVAIEIFDEWKLGQKSKNNGILLIIAPNERKMRIEVGRGLEGALTDIQAKQIIRNELRPSFKSGDMDGG VTAGVNAIMATIRGEYAPSEDDVQTTGRDTASDVIPSGIVGGIFTFISLFIPSFGGVIFTIIGLIVILPLLTFIFGGTFG LIAAIILFVIIMFLRRKLGHGLGGGSGYDGSGYYGGWSSGGDSWSSSDSSDSWSGGGGDSGGGGSSGDW
Sequences:
>Translated_309_residues MKMNIETSNSTSLLRQNFMFVFVLFTSLCCFLIPMFGYPVPKLERRVMDHAGILSEATVTQLESNLKQFEAETSNQIAVY TTPSLQDETIEGVAIEIFDEWKLGQKSKNNGILLIIAPNERKMRIEVGRGLEGALTDIQAKQIIRNELRPSFKSGDMDGG VTAGVNAIMATIRGEYAPSEDDVQTTGRDTASDVIPSGIVGGIFTFISLFIPSFGGVIFTIIGLIVILPLLTFIFGGTFG LIAAIILFVIIMFLRRKLGHGLGGGSGYDGSGYYGGWSSGGDSWSSSDSSDSWSGGGGDSGGGGSSGDW >Mature_309_residues MKMNIETSNSTSLLRQNFMFVFVLFTSLCCFLIPMFGYPVPKLERRVMDHAGILSEATVTQLESNLKQFEAETSNQIAVY TTPSLQDETIEGVAIEIFDEWKLGQKSKNNGILLIIAPNERKMRIEVGRGLEGALTDIQAKQIIRNELRPSFKSGDMDGG VTAGVNAIMATIRGEYAPSEDDVQTTGRDTASDVIPSGIVGGIFTFISLFIPSFGGVIFTIIGLIVILPLLTFIFGGTFG LIAAIILFVIIMFLRRKLGHGLGGGSGYDGSGYYGGWSSGGDSWSSSDSSDSWSGGGGDSGGGGSSGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=158, Percent_Identity=34.1772151898734, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 33061; Mature: 33061
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNIETSNSTSLLRQNFMFVFVLFTSLCCFLIPMFGYPVPKLERRVMDHAGILSEATVT CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHH QLESNLKQFEAETSNQIAVYTTPSLQDETIEGVAIEIFDEWKLGQKSKNNGILLIIAPNE HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEEECCC RKMRIEVGRGLEGALTDIQAKQIIRNELRPSFKSGDMDGGVTAGVNAIMATIRGEYAPSE CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DDVQTTGRDTASDVIPSGIVGGIFTFISLFIPSFGGVIFTIIGLIVILPLLTFIFGGTFG CCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIAAIILFVIIMFLRRKLGHGLGGGSGYDGSGYYGGWSSGGDSWSSSDSSDSWSGGGGDS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGSSGDW CCCCCCCCC >Mature Secondary Structure MKMNIETSNSTSLLRQNFMFVFVLFTSLCCFLIPMFGYPVPKLERRVMDHAGILSEATVT CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHH QLESNLKQFEAETSNQIAVYTTPSLQDETIEGVAIEIFDEWKLGQKSKNNGILLIIAPNE HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEEECCC RKMRIEVGRGLEGALTDIQAKQIIRNELRPSFKSGDMDGGVTAGVNAIMATIRGEYAPSE CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DDVQTTGRDTASDVIPSGIVGGIFTFISLFIPSFGGVIFTIIGLIVILPLLTFIFGGTFG CCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIAAIILFVIIMFLRRKLGHGLGGGSGYDGSGYYGGWSSGGDSWSSSDSSDSWSGGGGDS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGSSGDW CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]