| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222028
Identifier: 183222028
GI number: 183222028
Start: 2766450
End: 2767532
Strand: Reverse
Name: 183222028
Synonym: LEPBI_I2670
Alternate gene names: NA
Gene position: 2767532-2766450 (Counterclockwise)
Preceding gene: 183222031
Following gene: 183222027
Centisome position: 76.88
GC content: 39.24
Gene sequence:
>1083_bases ATGCAGGCGCACAAATACCTTTTGGCCATCTTAACAATTTTTTTCGCAGGCCAAATCACAGCACAGGTTGCTGACCCTAA AGCCACTACTTCCACAAAAGACCAGGCGATTCAAAAAACGGAATCTACCTCTACTCAAGCCAAAGACGGTGTTGATAAAG CTGAGACAACTGTAAAAGACATTTTGGGAGACAAAAAAGAAGCTGGGGCTTCTACAACTGATGCACCCGCTCTTTTCATC ACAAGCAAAACTTCCTTTTCCTTAGATGCAAAAGATGATTCCTCTATGATTGATTTCATTGAATGGAAACCAAAAAACGG TGAGTATCGAAGATTCACTCAACCAATCCGTATTTCCGAAGAAGGACTCACAGAAATTTACTATCGTTCCGTTGATAAAG CTGGTAACTCTGAAACTCCTAAAATCCTTGTTGTGAATGTAGACAATACTGCTCCACGAGTGAGCCTTGTTCCACAAGAA CAACTCTTTGTTTTAGATGGAGTACCATTCGCATCGAAAAACAACACTTATACGATTGTAGCGGAAGACCGCCAAACAGG TGTTGAAAAAGTACAATTTAGCATCAACCAAGAAGCTGCTAAATCTTATGCTGATCCCATCAAATTAGAAAATGGTGGAG CTAACGTAATTAAATACTCTGCAACTGATAAATCTGGAAACTCTTCTCCAGAATCATCTATGATCATCACAGTTGACGAT GTAAAACCTACAATTGAAATCGTTCCTTCTTATCCTTTAGTGGATATCAATGGAAAAAATTTCCAAAGAAAAGGCAACGT ATTTTATGTGAATGCAACTGACAAAGAATCTGGTGTGAAAAAAATCTTAGTCAAAATTGACGAAGAAGAATTCAAACCAT ATGTAGAAGCAATTGCAATTGAAACACAAGGTGACCATGTGATCAAAGCAATGGCTGTTGACAATGTTGGGAACCAATCC GATGTCGTGGAAGTGAAACTCAGTGTTGACCTGACTCCTCCTACATCTACCATTCAAAAATCAACAGAAGAACCAAAAGT AGAAGCAGCTCCGGCACCACAACCTTCTACTCCTGCTAAATAA
Upstream 100 bases:
>100_bases AAGTATCAGGATTATCGTATTTCTTAAAGCAATCATGTTGACAATATTTCCTTAGAAAGAGGATATATATGTTTTATCTG TAAAAAGGAGACACATACAA
Downstream 100 bases:
>100_bases GATTTTAAAAAAGTAAGACCAATCTCTTACTTCAAAAACCCCTTTCATTATGAGAGGGGTTTTTTTTTCACTTCTGACAT TTTTATTTCCCAAGTATTGT
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide; Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; S-Layer Domain Protein; Glucose/Sorbosone Dehydrogenase
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MQAHKYLLAILTIFFAGQITAQVADPKATTSTKDQAIQKTESTSTQAKDGVDKAETTVKDILGDKKEAGASTTDAPALFI TSKTSFSLDAKDDSSMIDFIEWKPKNGEYRRFTQPIRISEEGLTEIYYRSVDKAGNSETPKILVVNVDNTAPRVSLVPQE QLFVLDGVPFASKNNTYTIVAEDRQTGVEKVQFSINQEAAKSYADPIKLENGGANVIKYSATDKSGNSSPESSMIITVDD VKPTIEIVPSYPLVDINGKNFQRKGNVFYVNATDKESGVKKILVKIDEEEFKPYVEAIAIETQGDHVIKAMAVDNVGNQS DVVEVKLSVDLTPPTSTIQKSTEEPKVEAAPAPQPSTPAK
Sequences:
>Translated_360_residues MQAHKYLLAILTIFFAGQITAQVADPKATTSTKDQAIQKTESTSTQAKDGVDKAETTVKDILGDKKEAGASTTDAPALFI TSKTSFSLDAKDDSSMIDFIEWKPKNGEYRRFTQPIRISEEGLTEIYYRSVDKAGNSETPKILVVNVDNTAPRVSLVPQE QLFVLDGVPFASKNNTYTIVAEDRQTGVEKVQFSINQEAAKSYADPIKLENGGANVIKYSATDKSGNSSPESSMIITVDD VKPTIEIVPSYPLVDINGKNFQRKGNVFYVNATDKESGVKKILVKIDEEEFKPYVEAIAIETQGDHVIKAMAVDNVGNQS DVVEVKLSVDLTPPTSTIQKSTEEPKVEAAPAPQPSTPAK >Mature_360_residues MQAHKYLLAILTIFFAGQITAQVADPKATTSTKDQAIQKTESTSTQAKDGVDKAETTVKDILGDKKEAGASTTDAPALFI TSKTSFSLDAKDDSSMIDFIEWKPKNGEYRRFTQPIRISEEGLTEIYYRSVDKAGNSETPKILVVNVDNTAPRVSLVPQE QLFVLDGVPFASKNNTYTIVAEDRQTGVEKVQFSINQEAAKSYADPIKLENGGANVIKYSATDKSGNSSPESSMIITVDD VKPTIEIVPSYPLVDINGKNFQRKGNVFYVNATDKESGVKKILVKIDEEEFKPYVEAIAIETQGDHVIKAMAVDNVGNQS DVVEVKLSVDLTPPTSTIQKSTEEPKVEAAPAPQPSTPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39187; Mature: 39187
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAHKYLLAILTIFFAGQITAQVADPKATTSTKDQAIQKTESTSTQAKDGVDKAETTVKD CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHH ILGDKKEAGASTTDAPALFITSKTSFSLDAKDDSSMIDFIEWKPKNGEYRRFTQPIRISE HHCCCHHCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCCCHHCCCCCEEECC EGLTEIYYRSVDKAGNSETPKILVVNVDNTAPRVSLVPQEQLFVLDGVPFASKNNTYTIV CHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEE AEDRQTGVEKVQFSINQEAAKSYADPIKLENGGANVIKYSATDKSGNSSPESSMIITVDD ECCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEC VKPTIEIVPSYPLVDINGKNFQRKGNVFYVNATDKESGVKKILVKIDEEEFKPYVEAIAI CCCEEEEECCCCEEEECCCCCEECCCEEEEECCCCCCCCEEEEEEECHHHHCCEEEEEEE ETQGDHVIKAMAVDNVGNQSDVVEVKLSVDLTPPTSTIQKSTEEPKVEAAPAPQPSTPAK ECCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MQAHKYLLAILTIFFAGQITAQVADPKATTSTKDQAIQKTESTSTQAKDGVDKAETTVKD CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHH ILGDKKEAGASTTDAPALFITSKTSFSLDAKDDSSMIDFIEWKPKNGEYRRFTQPIRISE HHCCCHHCCCCCCCCCEEEEEECCCEEECCCCCCCEEEEEEECCCCCCHHCCCCCEEECC EGLTEIYYRSVDKAGNSETPKILVVNVDNTAPRVSLVPQEQLFVLDGVPFASKNNTYTIV CHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEE AEDRQTGVEKVQFSINQEAAKSYADPIKLENGGANVIKYSATDKSGNSSPESSMIITVDD ECCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEC VKPTIEIVPSYPLVDINGKNFQRKGNVFYVNATDKESGVKKILVKIDEEEFKPYVEAIAI CCCEEEEECCCCEEEECCCCCEECCCEEEEECCCCCCCCEEEEEEECHHHHCCEEEEEEE ETQGDHVIKAMAVDNVGNQSDVVEVKLSVDLTPPTSTIQKSTEEPKVEAAPAPQPSTPAK ECCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA