| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221939
Identifier: 183221939
GI number: 183221939
Start: 2666086
End: 2667072
Strand: Direct
Name: 183221939
Synonym: LEPBI_I2578
Alternate gene names: NA
Gene position: 2666086-2667072 (Clockwise)
Preceding gene: 183221927
Following gene: 183221940
Centisome position: 74.06
GC content: 41.13
Gene sequence:
>987_bases ATGCCTGAAACACCAAACTATTATTCTGTCAAAGTCAATCTACGAGACGAAGCCAATATGGTGTACACCATGGTTTCTGC CATCATCGACCCGGTTGAAATCAAATCGGTGAAATATGAGGGAGTTTCGTGCTCAAGTCCCCTTTCGCTTTTGCCTGTTC GTTCGACATTCCAAGACTTTTACAACCGAATGCAACGTGTGATCTACAAAGGGGAACAACAAAAAAACATCACGAAGTCC CTACAAGAACTCATCAAAACGAAGTTTGGTTCAGAGAGTTTTTTAGAAGAAATTTTACATTATATGGACCACAACTTGAC CGACCGTTTGGACTTTGTCTTCAGCGAAATCCACAAACGGACAGCAGGGAATTCAGAACCCAAAGTGGAAATCCATTTTG AACTGATTGATCCGAATGACATGACAAAGACCACAGTGGACGAAGAGGAAATTGCCAAAAAGGAAGCCCCTCCCGTAACC CCGGTCCCGCAAGCATCTGGATTTCTCATCCCAGCCGATAAACAAATTGTTCAGTTTAAGTTCCAACTTTCGCCTGTCAA TGGAATCCCCCTTGTGGAACTAAAAGCAGGTGATAATGTATACATACGACTCGTACCAGGGGATGCAGTCACAGATTCCA TCATCAATACTTTGGAACTCAAAGAAGAATCAGGTGCCATCAAACAAATTCCTGCAAAAATTGTGAACATTTCGAATAAC AAAAATTTTTCGGAAGTGGTGATCAAAATCAATGAACAGATTTATGGCAAAATCATCGAAGAAGAAAACTCAGTCAAAAT CAAAACCACTGATAGTAATGCGGGTGCTGCAAATATCATGAACTCGGTTGCCTCACCTACGGCAAAAATCACAAAAGCCA AACAAAATCCAAATCTGTCGGCCGATGAAAGTTTCCATTTGATGCCTTATATCATCATGTTAGTGGTGCTTGCCATTGGG ATGATGACAATCTTTGTAATTCTCTAA
Upstream 100 bases:
>100_bases CTCGGATGTAACGGATTGTGATTAAAGAGACGATTCCCATGATGACCTAATCTTTTTGACAGCTTTCTCTGAAAGATGGA TACTGTCAAAAAAGAACCTT
Downstream 100 bases:
>100_bases ACTAAATGACTCAATTCAAAAAAAAATTACCAATCCTTTCCCCTCTCTTCATTGCACTGGTTGTTCTTCACTCTTTGTTT GTGGATTACACAGTCCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPETPNYYSVKVNLRDEANMVYTMVSAIIDPVEIKSVKYEGVSCSSPLSLLPVRSTFQDFYNRMQRVIYKGEQQKNITKS LQELIKTKFGSESFLEEILHYMDHNLTDRLDFVFSEIHKRTAGNSEPKVEIHFELIDPNDMTKTTVDEEEIAKKEAPPVT PVPQASGFLIPADKQIVQFKFQLSPVNGIPLVELKAGDNVYIRLVPGDAVTDSIINTLELKEESGAIKQIPAKIVNISNN KNFSEVVIKINEQIYGKIIEEENSVKIKTTDSNAGAANIMNSVASPTAKITKAKQNPNLSADESFHLMPYIIMLVVLAIG MMTIFVIL
Sequences:
>Translated_328_residues MPETPNYYSVKVNLRDEANMVYTMVSAIIDPVEIKSVKYEGVSCSSPLSLLPVRSTFQDFYNRMQRVIYKGEQQKNITKS LQELIKTKFGSESFLEEILHYMDHNLTDRLDFVFSEIHKRTAGNSEPKVEIHFELIDPNDMTKTTVDEEEIAKKEAPPVT PVPQASGFLIPADKQIVQFKFQLSPVNGIPLVELKAGDNVYIRLVPGDAVTDSIINTLELKEESGAIKQIPAKIVNISNN KNFSEVVIKINEQIYGKIIEEENSVKIKTTDSNAGAANIMNSVASPTAKITKAKQNPNLSADESFHLMPYIIMLVVLAIG MMTIFVIL >Mature_327_residues PETPNYYSVKVNLRDEANMVYTMVSAIIDPVEIKSVKYEGVSCSSPLSLLPVRSTFQDFYNRMQRVIYKGEQQKNITKSL QELIKTKFGSESFLEEILHYMDHNLTDRLDFVFSEIHKRTAGNSEPKVEIHFELIDPNDMTKTTVDEEEIAKKEAPPVTP VPQASGFLIPADKQIVQFKFQLSPVNGIPLVELKAGDNVYIRLVPGDAVTDSIINTLELKEESGAIKQIPAKIVNISNNK NFSEVVIKINEQIYGKIIEEENSVKIKTTDSNAGAANIMNSVASPTAKITKAKQNPNLSADESFHLMPYIIMLVVLAIGM MTIFVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36713; Mature: 36582
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETPNYYSVKVNLRDEANMVYTMVSAIIDPVEIKSVKYEGVSCSSPLSLLPVRSTFQDF CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEECHHHHHHH YNRMQRVIYKGEQQKNITKSLQELIKTKFGSESFLEEILHYMDHNLTDRLDFVFSEIHKR HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TAGNSEPKVEIHFELIDPNDMTKTTVDEEEIAKKEAPPVTPVPQASGFLIPADKQIVQFK HCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEE FQLSPVNGIPLVELKAGDNVYIRLVPGDAVTDSIINTLELKEESGAIKQIPAKIVNISNN EEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCC KNFSEVVIKINEQIYGKIIEEENSVKIKTTDSNAGAANIMNSVASPTAKITKAKQNPNLS CCHHHHHEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCCCC ADESFHLMPYIIMLVVLAIGMMTIFVIL CCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PETPNYYSVKVNLRDEANMVYTMVSAIIDPVEIKSVKYEGVSCSSPLSLLPVRSTFQDF CCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCEEECHHHHHHH YNRMQRVIYKGEQQKNITKSLQELIKTKFGSESFLEEILHYMDHNLTDRLDFVFSEIHKR HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TAGNSEPKVEIHFELIDPNDMTKTTVDEEEIAKKEAPPVTPVPQASGFLIPADKQIVQFK HCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEE FQLSPVNGIPLVELKAGDNVYIRLVPGDAVTDSIINTLELKEESGAIKQIPAKIVNISNN EEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCC KNFSEVVIKINEQIYGKIIEEENSVKIKTTDSNAGAANIMNSVASPTAKITKAKQNPNLS CCHHHHHEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCCCC ADESFHLMPYIIMLVVLAIGMMTIFVIL CCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA