| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221921
Identifier: 183221921
GI number: 183221921
Start: 2648299
End: 2648676
Strand: Direct
Name: 183221921
Synonym: LEPBI_I2560
Alternate gene names: NA
Gene position: 2648299-2648676 (Clockwise)
Preceding gene: 183221919
Following gene: 183221927
Centisome position: 73.57
GC content: 34.39
Gene sequence:
>378_bases GTGATTTTTGAAAATCCATATCAAAAAACTGAAAAACAAACAGACGTTACTTCGTTTACAATTTATTTTGCAAAAAAATC GAATTTAATACCCAAACCTGACTTAGTCCGCTTACAAACGGTAGCCGATTTTCTGAATCGAAACCGAAACTATGAAATTC ATATTGATGCTCATGCTGTGGAGGGAAAAAATAACGAAGAAAATATAATGATCAGCGAAAAACGATCTTTAGAGGTAGAA CGTTTTTTATTGATCCACTTTGTGGAACCGAATCAAATCAGGCGTTTGTTCTATGGAAATACTAAATCTCCGAACCAAAC AAAGGAACACGAAGCATTGAATCGGCGAGTTGAGATCCAATTACATCCAATGAATTAA
Upstream 100 bases:
>100_bases GTCACGATTCCAGTGGAACAAAGCACTCTTCTTCATTTTTTTAACTTACACTGTTCAATATTTTCTGAGACCAAACTTCG ATTTGTTGGCAGAAGAAGGA
Downstream 100 bases:
>100_bases TGATTTTGTTTCCATTCCTTCCAATCTTCAACCGTGTCAATGTCATTTAATTCTTCTAATAATGTAAAGGTAAGGTTTTG ATCTTGTATCCTTTTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEVE RFLLIHFVEPNQIRRLFYGNTKSPNQTKEHEALNRRVEIQLHPMN
Sequences:
>Translated_125_residues MIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEVE RFLLIHFVEPNQIRRLFYGNTKSPNQTKEHEALNRRVEIQLHPMN >Mature_125_residues MIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEVE RFLLIHFVEPNQIRRLFYGNTKSPNQTKEHEALNRRVEIQLHPMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14883; Mature: 14883
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAV CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE EGKNNEENIMISEKRSLEVERFLLIHFVEPNQIRRLFYGNTKSPNQTKEHEALNRRVEIQ CCCCCCCCEEEECCCCCCEEEEEEEEEECCHHEEHEEECCCCCCCCCHHHHHHCCEEEEE LHPMN EEECC >Mature Secondary Structure MIFENPYQKTEKQTDVTSFTIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAV CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE EGKNNEENIMISEKRSLEVERFLLIHFVEPNQIRRLFYGNTKSPNQTKEHEALNRRVEIQ CCCCCCCCEEEECCCCCCEEEEEEEEEECCHHEEHEEECCCCCCCCCHHHHHHCCEEEEE LHPMN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA