| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221804
Identifier: 183221804
GI number: 183221804
Start: 2507491
End: 2508483
Strand: Direct
Name: 183221804
Synonym: LEPBI_I2435
Alternate gene names: NA
Gene position: 2507491-2508483 (Clockwise)
Preceding gene: 183221803
Following gene: 183221809
Centisome position: 69.66
GC content: 41.19
Gene sequence:
>993_bases ATGGCACTGACTCACCCGCAATCAGCTCTCTTTGCAGGAGAAAAACCTTTCCCTATCATTCCTGCTTGTGAACACTTCGC TGGATCTGAAAAACTCATCACAAAAGCTCTCGAGTTACAAAACAAACTTGGTGGTCTTTTTGATATTACGATGGACTGTG AAGACGGTGCCCAAACAGGGAAAGAAAAAGAACACGCAGAAATGATTGTTCGTATTCAAAACTCAGAACTCAACAAACAC AAAATGAGTGGAGTTCGGATTCATGATTATACCAACGAACATTGGAGAGGTGATATTGATATCATCGTTCCAGGTGCAGG GAATGTAATTGCTTACATCACGATTCCAAAACCAACAAAAGCAAGCCAAGTCAAAGAACAAATCACTTACATCCAAGAAA CTTGCAAAAAAGCAGGAATCAAAAGAGAAATTCCAATTCACGTTTTGATAGAAACACACGGTGCATTGAATGATGTGTTT GAAATCGCAAGCCTCCCATGGTTACAAGTTTTGGATTTCGGACTCATGGACTTTATCTCAGGTCACCACGGCGCCATTCC TGCTTCTTGCATGAAGTCCCCTGGTCAGTTTGATCACGAACTCCTCAGACGGGCAAAATCAAACATGGTAGCTGCCGCAT TGATGAACGGCGTGATCCCTGCACACAACGTAACATTGGATCTAAAAAACACATACCAAACTTACCAAGATGCAAAACGT GCACATGATGAATTCGGTTTCTTACGTATGTGGTCTATTTATCCAGCACAAATCCAATCCATTTTGGATGCAATGGCACC TAACTTTGCAGAAACTCAAACTGCTTGTGATATTTTAATCAAAGCTCAAGATGCAGATTGGGGTCCAATCCAACATGACG GTGACCTTCATGACCGTGCCACTTACAGATACTTCTGGGAATTAGTCCAAAGAGCAAAACTTACAGGTCAAAAACTTCCT GAAGAAGTAGAGAAACGATTTTTTTCAAAATAA
Upstream 100 bases:
>100_bases GGATTCTCGGAGTCGATCCACTTCGGTTTTTGCCATTAAATCCTGGACGACAGGCAAAATTCACAAAACTTGGTAAAAAA ATCCGAAAAAGGTATACTAA
Downstream 100 bases:
>100_bases GATTTTAAAAATCAATTCTTTCGTATGAATCTAAGGCCCACTCATGTGGGCCTTTTTTTATTTTAATTTGAATTTCTCTA CCTGAGTCGATAGATACGAG
Product: putative malate synthase-like protein
Products: acetate; oxaloacetate
Alternate protein names: Citrate Lyase Beta Subunit; Citrate Lyase; Citrate Lyase Subunit Beta-Like Protein; Malyl-CoA Lyase Or Citrate Lyase Beta Subunit; Citryl-CoA Lyase; Citrate-Lyase; Malate Synthase-Like Protein; HpcH/HpaI Aldolase/Citrate Lyase Family; Hpch/Hpai Aldolase; Citrate Lyase Beta Subunit Protein; Citrate Lyase Beta Chain; Malate-CoA Ligase Alpha Chain; Citrate Lyase Subunit Beta; Citrate Lyase/Aldolase
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MALTHPQSALFAGEKPFPIIPACEHFAGSEKLITKALELQNKLGGLFDITMDCEDGAQTGKEKEHAEMIVRIQNSELNKH KMSGVRIHDYTNEHWRGDIDIIVPGAGNVIAYITIPKPTKASQVKEQITYIQETCKKAGIKREIPIHVLIETHGALNDVF EIASLPWLQVLDFGLMDFISGHHGAIPASCMKSPGQFDHELLRRAKSNMVAAALMNGVIPAHNVTLDLKNTYQTYQDAKR AHDEFGFLRMWSIYPAQIQSILDAMAPNFAETQTACDILIKAQDADWGPIQHDGDLHDRATYRYFWELVQRAKLTGQKLP EEVEKRFFSK
Sequences:
>Translated_330_residues MALTHPQSALFAGEKPFPIIPACEHFAGSEKLITKALELQNKLGGLFDITMDCEDGAQTGKEKEHAEMIVRIQNSELNKH KMSGVRIHDYTNEHWRGDIDIIVPGAGNVIAYITIPKPTKASQVKEQITYIQETCKKAGIKREIPIHVLIETHGALNDVF EIASLPWLQVLDFGLMDFISGHHGAIPASCMKSPGQFDHELLRRAKSNMVAAALMNGVIPAHNVTLDLKNTYQTYQDAKR AHDEFGFLRMWSIYPAQIQSILDAMAPNFAETQTACDILIKAQDADWGPIQHDGDLHDRATYRYFWELVQRAKLTGQKLP EEVEKRFFSK >Mature_329_residues ALTHPQSALFAGEKPFPIIPACEHFAGSEKLITKALELQNKLGGLFDITMDCEDGAQTGKEKEHAEMIVRIQNSELNKHK MSGVRIHDYTNEHWRGDIDIIVPGAGNVIAYITIPKPTKASQVKEQITYIQETCKKAGIKREIPIHVLIETHGALNDVFE IASLPWLQVLDFGLMDFISGHHGAIPASCMKSPGQFDHELLRRAKSNMVAAALMNGVIPAHNVTLDLKNTYQTYQDAKRA HDEFGFLRMWSIYPAQIQSILDAMAPNFAETQTACDILIKAQDADWGPIQHDGDLHDRATYRYFWELVQRAKLTGQKLPE EVEKRFFSK
Specific function: Unknown
COG id: COG2301
COG function: function code G; Citrate lyase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.3.6
Molecular weight: Translated: 37116; Mature: 36985
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTHPQSALFAGEKPFPIIPACEHFAGSEKLITKALELQNKLGGLFDITMDCEDGAQTG CCCCCCCHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHCC KEKEHAEMIVRIQNSELNKHKMSGVRIHDYTNEHWRGDIDIIVPGAGNVIAYITIPKPTK CHHHHHHHEEEECCCCCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCC ASQVKEQITYIQETCKKAGIKREIPIHVLIETHGALNDVFEIASLPWLQVLDFGLMDFIS HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHC GHHGAIPASCMKSPGQFDHELLRRAKSNMVAAALMNGVIPAHNVTLDLKNTYQTYQDAKR CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH AHDEFGFLRMWSIYPAQIQSILDAMAPNFAETQTACDILIKAQDADWGPIQHDGDLHDRA HHHHCCHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHH TYRYFWELVQRAKLTGQKLPEEVEKRFFSK HHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure ALTHPQSALFAGEKPFPIIPACEHFAGSEKLITKALELQNKLGGLFDITMDCEDGAQTG CCCCCCHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHCC KEKEHAEMIVRIQNSELNKHKMSGVRIHDYTNEHWRGDIDIIVPGAGNVIAYITIPKPTK CHHHHHHHEEEECCCCCCHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCC ASQVKEQITYIQETCKKAGIKREIPIHVLIETHGALNDVFEIASLPWLQVLDFGLMDFIS HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHC GHHGAIPASCMKSPGQFDHELLRRAKSNMVAAALMNGVIPAHNVTLDLKNTYQTYQDAKR CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH AHDEFGFLRMWSIYPAQIQSILDAMAPNFAETQTACDILIKAQDADWGPIQHDGDLHDRA HHHHCCHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHH TYRYFWELVQRAKLTGQKLPEEVEKRFFSK HHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: citrate
Specific reaction: citrate = acetate + oxaloacetate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA