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The map label for this gene is 183221717

Identifier: 183221717

GI number: 183221717

Start: 2417725

End: 2418114

Strand: Direct

Name: 183221717

Synonym: LEPBI_I2346

Alternate gene names: NA

Gene position: 2417725-2418114 (Clockwise)

Preceding gene: 183221716

Following gene: 183221723

Centisome position: 67.17

GC content: 30.0

Gene sequence:

>390_bases
TTGATTGATACAGATATAATATTATACAGCCTAAAAGGGAATGAAAAAGTTCAAAACAATCTTATCGAGAAGAAAAATAT
TTCGAAGGTCATTTCTGTAATTACTTATGGCGAACTAATATTTGGTGCGAAGAAATCAAAAAGTAGAGAGAAAAATCTGG
CGACTGTATATAGAATTGGAGAACTTTTTCCTGTCATTGAATTGACGAAAGGAATTGTTGAAACCTTTGGAGAAGTAAAG
GCTACAGTACAGAAAAAAGGAAATACAGTTGACGATTTCGATCTTCTAATCGGTTCAACTGCTTTATTTTTAAATTATAC
CTTAGTTACTAATAATGAAAAACATTTCTCATTGATTCCTGATTTAAAAATTGAGAACTGGAGTAAATAA

Upstream 100 bases:

>100_bases
ACTAACTCTTGGCATGACAACAAAGATGCAAAAGATATAATTTCAGACATTCGATCTTCAAGATCAAGAAATAATCAATC
TAGGACAACAGATGAGTTAT

Downstream 100 bases:

>100_bases
CCTACTTTTCTAATTAAAAAAACATCGCATAACAGCGCCTTTCTGCTAACTTACCAAACATTTGATGGATTGGACCAAAT
TTTGAGAACTCACTCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIDTDIILYSLKGNEKVQNNLIEKKNISKVISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTKGIVETFGEVK
ATVQKKGNTVDDFDLLIGSTALFLNYTLVTNNEKHFSLIPDLKIENWSK

Sequences:

>Translated_129_residues
MIDTDIILYSLKGNEKVQNNLIEKKNISKVISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTKGIVETFGEVK
ATVQKKGNTVDDFDLLIGSTALFLNYTLVTNNEKHFSLIPDLKIENWSK
>Mature_129_residues
MIDTDIILYSLKGNEKVQNNLIEKKNISKVISVITYGELIFGAKKSKSREKNLATVYRIGELFPVIELTKGIVETFGEVK
ATVQKKGNTVDDFDLLIGSTALFLNYTLVTNNEKHFSLIPDLKIENWSK

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14553; Mature: 14553

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTDIILYSLKGNEKVQNNLIEKKNISKVISVITYGELIFGAKKSKSREKNLATVYRIG
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ELFPVIELTKGIVETFGEVKATVQKKGNTVDDFDLLIGSTALFLNYTLVTNNEKHFSLIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEEEECCCCCEEECC
DLKIENWSK
CCCCCCCCC
>Mature Secondary Structure
MIDTDIILYSLKGNEKVQNNLIEKKNISKVISVITYGELIFGAKKSKSREKNLATVYRIG
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ELFPVIELTKGIVETFGEVKATVQKKGNTVDDFDLLIGSTALFLNYTLVTNNEKHFSLIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEEEECCCCCEEECC
DLKIENWSK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]