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The map label for this gene is nusB

Identifier: 183221521

GI number: 183221521

Start: 2232680

End: 2233102

Strand: Reverse

Name: nusB

Synonym: LEPBI_I2139

Alternate gene names: 183221521

Gene position: 2233102-2232680 (Counterclockwise)

Preceding gene: 183221522

Following gene: 183221520

Centisome position: 62.04

GC content: 43.5

Gene sequence:

>423_bases
ATGAGTTCCAGACACCGTGGGCGAAGTCTTGCCCTAATGTGCCTCTACCAAATTGATTTGGTGGGGACAGACCCAGACCG
GGCTATGAAATTCGATTGGTATGACAAAAAAATCACGAGAGAAGAAAAGGATTATGCTGTCTTTCTTGTGAAAGGAGTGG
TCGAAAATCGAAAAGCGATCGATACTCTAATCAAGAAGTATTCGGAGAATTGGGAACTTTCGCGTATTTCCGTGGTCAAT
CGTTGTATCTTACGTTTATCGATCCTAAGTTTGCAAAAGGAACCTTTCCTTGCCGCACCCGTTGTCATCAATGAAGCGGT
AGAACTCACAAAGGAATTTGAAACAGAAGAATCAGCGCAATTCATCAACGGACTACTCGATGCCTTCTATAAGAAGGAGA
TCTTACCGAAAGAGCCCCACTAA

Upstream 100 bases:

>100_bases
TTGAACAAGCCATTGAGAGGGCAGGGACAAAAGCGGGAAACAAGGGTTACGAAGCGGCCACCACAGCCATTGAAATGGCA
AATCTTTTCAAAGAGATCGG

Downstream 100 bases:

>100_bases
AATAAAAAATGGATCCCATCCAAAAAAACCGCTTTCGCATTGAGGAACAAACCTCCAAGCCAAGTTATTACCAGGAAGAT
CCATACTTAAGGAACCTGGG

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLVKGVVENRKAIDTLIKKYSENWELSRISVVN
RCILRLSILSLQKEPFLAAPVVINEAVELTKEFETEESAQFINGLLDAFYKKEILPKEPH

Sequences:

>Translated_140_residues
MSSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLVKGVVENRKAIDTLIKKYSENWELSRISVVN
RCILRLSILSLQKEPFLAAPVVINEAVELTKEFETEESAQFINGLLDAFYKKEILPKEPH
>Mature_139_residues
SSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLVKGVVENRKAIDTLIKKYSENWELSRISVVNR
CILRLSILSLQKEPFLAAPVVINEAVELTKEFETEESAQFINGLLDAFYKKEILPKEPH

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_LEPBA (B0SB76)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001963160.1
- ProteinModelPortal:   B0SB76
- SMR:   B0SB76
- GeneID:   6387772
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_2085
- HOGENOM:   HBG734409
- OMA:   YGTENSG
- ProtClustDB:   PRK00202
- BioCyc:   LBIF355278:LBF_2085-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16295; Mature: 16164

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLVKGVVENRKAI
CCCCCCCCHHHHHHHHHHEECCCCCCCCEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHH
DTLIKKYSENWELSRISVVNRCILRLSILSLQKEPFLAAPVVINEAVELTKEFETEESAQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCHHHHH
FINGLLDAFYKKEILPKEPH
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLVKGVVENRKAI
CCCCCCCHHHHHHHHHHEECCCCCCCCEECCCCCHHHCCCCCCCEEEEHHHHHHHHHHH
DTLIKKYSENWELSRISVVNRCILRLSILSLQKEPFLAAPVVINEAVELTKEFETEESAQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHCCHHHHH
FINGLLDAFYKKEILPKEPH
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA