Click here to switch to the map view.

The map label for this gene is flaB3 [H]

Identifier: 183221514

GI number: 183221514

Start: 2224073

End: 2224921

Strand: Reverse

Name: flaB3 [H]

Synonym: LEPBI_I2132

Alternate gene names: 183221514

Gene position: 2224921-2224073 (Counterclockwise)

Preceding gene: 183221515

Following gene: 183221510

Centisome position: 61.81

GC content: 46.41

Gene sequence:

>849_bases
ATGATTATCAATCACAACATGAGTGCGATTCAATCACATCGTGCTCTCAAGTTTACACAATGGGATGTAGATAAGACCAT
GAGGAACCTCTCCACTGGGCAAAGGATTAACCTTGCCGGTGATGATGCTTCTGGTCTTGCTGTTTCGGAAAAACTACGGA
CACAAATTCGTGGTTTACGTCAGGCGGAAAGGAATACGGAAGATGGACTGAGTTTCATCCAGACTGCAGAGGGTTACCTT
GACCAGTCGGCTGAAATCATCCAACGAATCCGGACCTTAGCGATCCAGACTTCGAACGGAATCTACACACCTGAGGACAG
GCAACTCGTGCAGGTAGAAGTATCTGCGCTGGTGGATGAGATCGATCGAATCGCTTCGCAAGCAGAGTTCAATAAAATGA
AACTGTTTGAAGGAGACTTCGCTCGAAAGTCAACAAAAGCATCGATGTGGTTTCACATGGGAGCAAACGCAAGGCAAAGA
GAGCGTTTCTACATTGGAACTATGACTTCGAAAGCACTTAAGATGTCAGAAGGGGCAATTAAAATTGCACTCTCGACACC
TGGAAAAGCTGACGAAGCGATTGCCAAAGCGGACTTCGCCTTGAACAAGATCATGAAGCAGAGGGCAGATATGGGAGCTT
ACCAAAATAGGCTCGAAAGTACTGCAAAAGGCCTCATGGGTGCATACGAAAATATGCAAGCATCCGAATCAAGGATTAGG
GACGCAGATATGGCTGAGGAAATGGTAGCGCTCACGACGAAACAAATTCTCGTGCAAAGCGGTACGGCAATGCTAGCGCA
AGCCAGCCTCAGACCAAATTCTGTACTACGACTTTTGAATAACACTTAA

Upstream 100 bases:

>100_bases
GTGGCAAAATGAAAGCTCATCCTTGACACCGGACAGGGATTGTCCGGCTAAGAACGAAACATATACCGTTCTTGGTTATA
ACACAAAGGAGTGTAGGCCA

Downstream 100 bases:

>100_bases
GTTGTAGAAGGCAAGAGTTGCCTTAAAGACGGTTGCCTCTTCTCGAAGGATACTTCGGGGAGAGGCTTTTTTATTTATAA
TGATAGTAGTGATTGGGATC

Product: flagellar filament 35 kDa core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIINHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLRQAERNTEDGLSFIQTAEGYL
DQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDEIDRIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQR
ERFYIGTMTSKALKMSEGAIKIALSTPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIR
DADMAEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLLNNT

Sequences:

>Translated_282_residues
MIINHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLRQAERNTEDGLSFIQTAEGYL
DQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDEIDRIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQR
ERFYIGTMTSKALKMSEGAIKIALSTPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIR
DADMAEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLLNNT
>Mature_282_residues
MIINHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLRQAERNTEDGLSFIQTAEGYL
DQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDEIDRIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQR
ERFYIGTMTSKALKMSEGAIKIALSTPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIR
DADMAEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLLNNT

Specific function: Component of the core of the flagella (Probable) [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=180, Percent_Identity=31.6666666666667, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31388; Mature: 31388

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLR
CEECCCHHHHHHHCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
QAERNTEDGLSFIQTAEGYLDQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDE
HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH
IDRIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQRERFYIGTMTSKALKMSEGAI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCEEEEECHHHHHHHCCCCEE
KIALSTPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADMAEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLLNNT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MIINHNMSAIQSHRALKFTQWDVDKTMRNLSTGQRINLAGDDASGLAVSEKLRTQIRGLR
CEECCCHHHHHHHCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
QAERNTEDGLSFIQTAEGYLDQSAEIIQRIRTLAIQTSNGIYTPEDRQLVQVEVSALVDE
HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH
IDRIASQAEFNKMKLFEGDFARKSTKASMWFHMGANARQRERFYIGTMTSKALKMSEGAI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCCEEEEECHHHHHHHCCCCEE
KIALSTPGKADEAIAKADFALNKIMKQRADMGAYQNRLESTAKGLMGAYENMQASESRIR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADMAEEMVALTTKQILVQSGTAMLAQASLRPNSVLRLLNNT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA