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The map label for this gene is yfbE [C]

Identifier: 183221418

GI number: 183221418

Start: 2117073

End: 2118233

Strand: Reverse

Name: yfbE [C]

Synonym: LEPBI_I2036

Alternate gene names: 183221418

Gene position: 2118233-2117073 (Counterclockwise)

Preceding gene: 183221419

Following gene: 183221417

Centisome position: 58.85

GC content: 34.11

Gene sequence:

>1161_bases
ATGATTCCTTATGGCAAACAGAATATAAATGAAGCAGATATAAATTCGGTAATTGAAGTTTTAAAATCTGATTTTTTAAC
GCAAGGTCCAGTTGTCGAAGATTTTGAAAAAGCTATCGCTGGTTATTGTAATGCAAAATATGCGGTTAGTGTTTCTAATG
CAACTGCTGCTCTTCATTTGTCATGTTTGGCTTTAGGTCTTAGTAAGGGTAAATTAGCTTGGACATCTCCGAATACGTTT
GTTGCAACCCCCAATTCTGTTCTGTATACAGGTGCAGAGGTTGATTTTGTTGATATTGATCCCAATTCCTATAATATCTC
TTTCGATGAATTGAGGAAAAAGTTAGTCGAGGCAAAAGCAAAACGAAAAGTTCCTGATGTTTTGCTTCCTGTACATTTTA
GTGGTCAATCCTGTGAGATGGAAGAAATCTATCAATTATCAAAAGAATATGGGTTTCATATAATCGAGGATGCTTCACAT
GCGGTAGGAGCAAAGTATAATGATAAGCCTGTTGGTAGTTGTGAATATTCTGATTTGTGTGTTTTTAGTTTTCACCCTGT
AAAAATTATTACAACGGGTGAAGGTGGAGTCATTACAACGAATCGGAAAGATTTATATGATCTTTTGATTCGGCTTAGGT
CACATGGGATAACTAGAAATCCCGATCTAATGACAAAAGAGTCTGATGGCGAATGGTATTATCAGCAATTGGAATTAGGT
TATAATTACAGGTTAACAGAATTACAGGCAGCCCTTGGATTGTCACAGTTAAAAAGACTCGATGAATTTGTTTTAAGAAG
AAATCAGATTGCGGAAAGATACAATATTCTTCTAAAAGATTTTTCAATAAAGTTGCCAACTGTATTAACTAAAAACTATT
CTTCTTACCACCTATTTGTGATTCAAATTGATGAGTCAAAATGTAAAAAAAGCCATAAAGAAGTTTTTTCAGATTTAAGA
AAAAATGGAATAGGAGTCCAACTTCACTATATTCCAGTACATACCCAACCATATTATCAATCATTAGGTTTTAAAATAGG
TTCATTCCCTGCGTCAGAGAAGTATTATGCGGCAGCTATTAGTTTGCCGGTTTATTTTGATTTAAAGGATTCAGAACAAG
ATAAAGTTGTTGAAACTTTAAAGGTATGCCTTGGTTCATGA

Upstream 100 bases:

>100_bases
AAAACTTTCGTTATAATAGTGGAGAAAATCACGAATGGTTAAGTGTGGAAGAAATCCGTAATCTGATCACCTCGAAAGTA
AGTGCTGGATTGGTTTGACT

Downstream 100 bases:

>100_bases
AAATTGGATTAGGTACTGTCCAATTCGGTATGGATTATGGGGTATCGAACCAAACGGGAAAAACAAATCAAGCCGAAGTG
AATTTAATCTTAAATAAGGC

Product: putative pyridoxal-phosphate-dependent aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MIPYGKQNINEADINSVIEVLKSDFLTQGPVVEDFEKAIAGYCNAKYAVSVSNATAALHLSCLALGLSKGKLAWTSPNTF
VATPNSVLYTGAEVDFVDIDPNSYNISFDELRKKLVEAKAKRKVPDVLLPVHFSGQSCEMEEIYQLSKEYGFHIIEDASH
AVGAKYNDKPVGSCEYSDLCVFSFHPVKIITTGEGGVITTNRKDLYDLLIRLRSHGITRNPDLMTKESDGEWYYQQLELG
YNYRLTELQAALGLSQLKRLDEFVLRRNQIAERYNILLKDFSIKLPTVLTKNYSSYHLFVIQIDESKCKKSHKEVFSDLR
KNGIGVQLHYIPVHTQPYYQSLGFKIGSFPASEKYYAAAISLPVYFDLKDSEQDKVVETLKVCLGS

Sequences:

>Translated_386_residues
MIPYGKQNINEADINSVIEVLKSDFLTQGPVVEDFEKAIAGYCNAKYAVSVSNATAALHLSCLALGLSKGKLAWTSPNTF
VATPNSVLYTGAEVDFVDIDPNSYNISFDELRKKLVEAKAKRKVPDVLLPVHFSGQSCEMEEIYQLSKEYGFHIIEDASH
AVGAKYNDKPVGSCEYSDLCVFSFHPVKIITTGEGGVITTNRKDLYDLLIRLRSHGITRNPDLMTKESDGEWYYQQLELG
YNYRLTELQAALGLSQLKRLDEFVLRRNQIAERYNILLKDFSIKLPTVLTKNYSSYHLFVIQIDESKCKKSHKEVFSDLR
KNGIGVQLHYIPVHTQPYYQSLGFKIGSFPASEKYYAAAISLPVYFDLKDSEQDKVVETLKVCLGS
>Mature_386_residues
MIPYGKQNINEADINSVIEVLKSDFLTQGPVVEDFEKAIAGYCNAKYAVSVSNATAALHLSCLALGLSKGKLAWTSPNTF
VATPNSVLYTGAEVDFVDIDPNSYNISFDELRKKLVEAKAKRKVPDVLLPVHFSGQSCEMEEIYQLSKEYGFHIIEDASH
AVGAKYNDKPVGSCEYSDLCVFSFHPVKIITTGEGGVITTNRKDLYDLLIRLRSHGITRNPDLMTKESDGEWYYQQLELG
YNYRLTELQAALGLSQLKRLDEFVLRRNQIAERYNILLKDFSIKLPTVLTKNYSSYHLFVIQIDESKCKKSHKEVFSDLR
KNGIGVQLHYIPVHTQPYYQSLGFKIGSFPASEKYYAAAISLPVYFDLKDSEQDKVVETLKVCLGS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=386, Percent_Identity=30.5699481865285, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI2367285, Length=337, Percent_Identity=28.1899109792285, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43480; Mature: 43480

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYGKQNINEADINSVIEVLKSDFLTQGPVVEDFEKAIAGYCNAKYAVSVSNATAALHL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHH
SCLALGLSKGKLAWTSPNTFVATPNSVLYTGAEVDFVDIDPNSYNISFDELRKKLVEAKA
HHHHHCCCCCEEEEECCCEEEECCCCEEEECCEEEEEEECCCCEECCHHHHHHHHHHHHH
KRKVPDVLLPVHFSGQSCEMEEIYQLSKEYGFHIIEDASHAVGAKYNDKPVGSCEYSDLC
HCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCCCEE
VFSFHPVKIITTGEGGVITTNRKDLYDLLIRLRSHGITRNPDLMTKESDGEWYYQQLELG
EEEECCEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCC
YNYRLTELQAALGLSQLKRLDEFVLRRNQIAERYNILLKDFSIKLPTVLTKNYSSYHLFV
CCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCEEEEE
IQIDESKCKKSHKEVFSDLRKNGIGVQLHYIPVHTQPYYQSLGFKIGSFPASEKYYAAAI
EEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHCCEECCCCCCCCEEEEEE
SLPVYFDLKDSEQDKVVETLKVCLGS
EEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPYGKQNINEADINSVIEVLKSDFLTQGPVVEDFEKAIAGYCNAKYAVSVSNATAALHL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHH
SCLALGLSKGKLAWTSPNTFVATPNSVLYTGAEVDFVDIDPNSYNISFDELRKKLVEAKA
HHHHHCCCCCEEEEECCCEEEECCCCEEEECCEEEEEEECCCCEECCHHHHHHHHHHHHH
KRKVPDVLLPVHFSGQSCEMEEIYQLSKEYGFHIIEDASHAVGAKYNDKPVGSCEYSDLC
HCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCCCEE
VFSFHPVKIITTGEGGVITTNRKDLYDLLIRLRSHGITRNPDLMTKESDGEWYYQQLELG
EEEECCEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCC
YNYRLTELQAALGLSQLKRLDEFVLRRNQIAERYNILLKDFSIKLPTVLTKNYSSYHLFV
CCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCCEEEEE
IQIDESKCKKSHKEVFSDLRKNGIGVQLHYIPVHTQPYYQSLGFKIGSFPASEKYYAAAI
EEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHCCEECCCCCCCCEEEEEE
SLPVYFDLKDSEQDKVVETLKVCLGS
EEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]