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The map label for this gene is ycdQ [C]

Identifier: 183221376

GI number: 183221376

Start: 2074858

End: 2075997

Strand: Reverse

Name: ycdQ [C]

Synonym: LEPBI_I1994

Alternate gene names: 183221376

Gene position: 2075997-2074858 (Counterclockwise)

Preceding gene: 183221377

Following gene: 183221375

Centisome position: 57.67

GC content: 34.65

Gene sequence:

>1140_bases
ATGAAAAAAACTACTGTAACGATTGTCATTCCTTGTCTTAATGAAGAACTAACGTTACCTTACGTTTTAAAGAAATTGGT
GCAAGTTAAAAAAGAGAATTCAAAGGTCTACGAGATTGAAATCCTCGTTTCTGATAATGGAAGTACCGATAAATCTGTAA
GTATCGCTAAGCAATTTGGAGCAAGGGTTGTTCCTGCAAAAGACAGGGGATATGGTGCCGCATTGGATTCTGGAATTCGT
AATGCAAAAGGTGAAATCGTAGTTTTTGCAGATGCGGATGACACTTATGATTTTTTGGAAGCTCCATTGTTGATCAACAA
ACTTGTATCTGGTGATTATGATATGGTGATTGGGTCTCGTTTGGATGGCACCATTTATAATGGAGCAATGCCTTTTTTAC
ATCGTTATTTGGGAACGCCAGTGATCAATTGGATCATCAATTTACTTTATGCGAAAAAAACTAAAATTCGTGATAGTAAT
TCTGGATTTCGATGTTTTAAGAAAGAAAAATATCTTTCTTGGGAAATCAAAAGTAAAGGTATGGAATTTGCATCAGAATT
GTTAATCAAAGCATTAATTCATGATGCAAAAATGGCGCATGTTCCCGTTTCTCTTTCTCCTGATAAAGAAGGAAGAATCC
CTCATTTGAAAACATGGAGAGATGGAATGAGACATTTACTCCGTATTTTATTTTATGGACCGCATTTATTTGAAAGGGTT
GGTTTTGTTTTTTTTGCGTTTTTTTGGCTCCAATTATTGATCGGTTTTTTCGCTCAGGGTGTGATATCCATCGCTGGATT
CAATTTGTACGGAATTCATTCAATGATCTTATTTTCTTTTTTGACCATATTAGGTTTAAGTCTTTGGGGAACTGGACTCC
TGATTGCAACTAAACAACCAAGGGTAAGTAAGCTATACCAAAATATTCTAGCAATGGAAGAGGATCGACTTTTTTTTGTA
TTGATCACTGGATTTGCAATCATTGGGTTAACGCTTGTTTGGTTAATTTTTCAGTGGTATAAATCGGGGTTTGTTTTTAT
TAATTTTGAACGTGAATTTATTGTAGCTTCCAATATAAGCCTTACATTGTTGATTTTCAGTTTACAGGCTCTTACTGCTC
ATATTATCAAAAGAGATTAA

Upstream 100 bases:

>100_bases
AGTTCCAAACTGGGAATCGATATTTCCCGGAATTAAAACCTTATTTCGAATTTTTTTTGGATATGTATGATCCTTTTGCT
ATATATAAACGAGGCGAATT

Downstream 100 bases:

>100_bases
ATGTGAAATTTTATTATCGTTATTTCATTTATTTTCTAATCATTTTAGTTCCGGTTTTCTTTCGATTGAAGTGGAATGAT
GCTTCTGTTTTTATTTCGAG

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKTTVTIVIPCLNEELTLPYVLKKLVQVKKENSKVYEIEILVSDNGSTDKSVSIAKQFGARVVPAKDRGYGAALDSGIR
NAKGEIVVFADADDTYDFLEAPLLINKLVSGDYDMVIGSRLDGTIYNGAMPFLHRYLGTPVINWIINLLYAKKTKIRDSN
SGFRCFKKEKYLSWEIKSKGMEFASELLIKALIHDAKMAHVPVSLSPDKEGRIPHLKTWRDGMRHLLRILFYGPHLFERV
GFVFFAFFWLQLLIGFFAQGVISIAGFNLYGIHSMILFSFLTILGLSLWGTGLLIATKQPRVSKLYQNILAMEEDRLFFV
LITGFAIIGLTLVWLIFQWYKSGFVFINFEREFIVASNISLTLLIFSLQALTAHIIKRD

Sequences:

>Translated_379_residues
MKKTTVTIVIPCLNEELTLPYVLKKLVQVKKENSKVYEIEILVSDNGSTDKSVSIAKQFGARVVPAKDRGYGAALDSGIR
NAKGEIVVFADADDTYDFLEAPLLINKLVSGDYDMVIGSRLDGTIYNGAMPFLHRYLGTPVINWIINLLYAKKTKIRDSN
SGFRCFKKEKYLSWEIKSKGMEFASELLIKALIHDAKMAHVPVSLSPDKEGRIPHLKTWRDGMRHLLRILFYGPHLFERV
GFVFFAFFWLQLLIGFFAQGVISIAGFNLYGIHSMILFSFLTILGLSLWGTGLLIATKQPRVSKLYQNILAMEEDRLFFV
LITGFAIIGLTLVWLIFQWYKSGFVFINFEREFIVASNISLTLLIFSLQALTAHIIKRD
>Mature_379_residues
MKKTTVTIVIPCLNEELTLPYVLKKLVQVKKENSKVYEIEILVSDNGSTDKSVSIAKQFGARVVPAKDRGYGAALDSGIR
NAKGEIVVFADADDTYDFLEAPLLINKLVSGDYDMVIGSRLDGTIYNGAMPFLHRYLGTPVINWIINLLYAKKTKIRDSN
SGFRCFKKEKYLSWEIKSKGMEFASELLIKALIHDAKMAHVPVSLSPDKEGRIPHLKTWRDGMRHLLRILFYGPHLFERV
GFVFFAFFWLQLLIGFFAQGVISIAGFNLYGIHSMILFSFLTILGLSLWGTGLLIATKQPRVSKLYQNILAMEEDRLFFV
LITGFAIIGLTLVWLIFQWYKSGFVFINFEREFIVASNISLTLLIFSLQALTAHIIKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=215, Percent_Identity=27.4418604651163, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585265, Length=212, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 42998; Mature: 42998

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTVTIVIPCLNEELTLPYVLKKLVQVKKENSKVYEIEILVSDNGSTDKSVSIAKQFG
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHCC
ARVVPAKDRGYGAALDSGIRNAKGEIVVFADADDTYDFLEAPLLINKLVSGDYDMVIGSR
CEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC
LDGTIYNGAMPFLHRYLGTPVINWIINLLYAKKTKIRDSNSGFRCFKKEKYLSWEIKSKG
CCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHHH
MEFASELLIKALIHDAKMAHVPVSLSPDKEGRIPHLKTWRDGMRHLLRILFYGPHLFERV
HHHHHHHHHHHHHHCCHHEEECEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
GFVFFAFFWLQLLIGFFAQGVISIAGFNLYGIHSMILFSFLTILGLSLWGTGLLIATKQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
RVSKLYQNILAMEEDRLFFVLITGFAIIGLTLVWLIFQWYKSGFVFINFEREFIVASNIS
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCH
LTLLIFSLQALTAHIIKRD
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTTVTIVIPCLNEELTLPYVLKKLVQVKKENSKVYEIEILVSDNGSTDKSVSIAKQFG
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHCC
ARVVPAKDRGYGAALDSGIRNAKGEIVVFADADDTYDFLEAPLLINKLVSGDYDMVIGSR
CEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCC
LDGTIYNGAMPFLHRYLGTPVINWIINLLYAKKTKIRDSNSGFRCFKKEKYLSWEIKSKG
CCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHHH
MEFASELLIKALIHDAKMAHVPVSLSPDKEGRIPHLKTWRDGMRHLLRILFYGPHLFERV
HHHHHHHHHHHHHHCCHHEEECEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
GFVFFAFFWLQLLIGFFAQGVISIAGFNLYGIHSMILFSFLTILGLSLWGTGLLIATKQP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
RVSKLYQNILAMEEDRLFFVLITGFAIIGLTLVWLIFQWYKSGFVFINFEREFIVASNIS
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCH
LTLLIFSLQALTAHIIKRD
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]