| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221371
Identifier: 183221371
GI number: 183221371
Start: 2069147
End: 2070508
Strand: Reverse
Name: 183221371
Synonym: LEPBI_I1989
Alternate gene names: NA
Gene position: 2070508-2069147 (Counterclockwise)
Preceding gene: 183221372
Following gene: 183221370
Centisome position: 57.52
GC content: 30.1
Gene sequence:
>1362_bases ATGCATTATTCTGATTTTTTTATCATTCAATGGTGGTTTACAACTTTTCTATTCGGTTTCGTCATTTACTATATATTCAA AACTATACTTTCTGAATCAGATTCATTCGTTCTATTTTTAGTTTTTTTATGTTCCGTTTTGCTTTCTATTTCCTATACTT TTTTAACATGGCATTCTTCTGGAATGGAGAACCCTTGGCTTCATTTCTTTTATCTCCTTTGTCTACTGATCTTATTCGGC TTAGTTGAAGGTAAAGAGTTGTCTCTTGCAAAAAATTCAATTCTTTTATTCTTTGCGAGCATAGTAAGAATCGAAAGTGT CTATCATCTTTCATTTGTATTTATTATTTTCTTTGTCATCCTGTATCGACAAAGAAGCTCAGTGCGAAAGATATACCCCG TTCTTATGGCTATTATCCTTTGGGTAATATTTTTTGTAATACGATCTCTATATTTTGGGAAAATATTTCCTAATACATCT ACAGCACAAGATTTATCTCTATTGGAAAATCTAAATCATCTATTCACTTTTAATCCCAGTTTAATCAAAAATTGGGAAAT ATTCAAAATAGGATTTAAACAAAATTTATTGTTACTTATTCCAATAAATTTGGGACTGTTTTTGTTTTTCAGAAGAAGTA ATCGGGAATTGAATTTTTTCTATTTATCTTTCGCTTTCCTGTTACCAGGAATTTTTCATCCATTTCTCATTGGTAATTTC AGACTCGATCCAGCAAGGCCTATGACTTGGATGTTAGCTATCTCGAGTGTGTTATTTATTGCAAGTATAGGTTCAATATT TAAACAAAAGAAATTTATTTTTATTTTGGTTTTTCTTCTAACATGTTTTATATCATACAAAAACTACAAATTGAAATCGT ACGATCTTTGTTGTAGTGCGAAAATATTTGAAGATAGAAAAGAAACGATTTTGTCCATTTCGAAACAAACTGAAATTCAA TTACCTTTAGTTGCGATTGCTGACTTAGATGTGATGAGCTTTGAAAAGAAATTAAATGTGTTGGACTTAGGATATCTAGG GAATCAATTTTTAGCCAGAAATAAAAATGATTCGAAATTAATTAAGAGTTACATCTCTTTGCAAAAGCCCGAGATTTTGG AAATTCATTTCCCTTGGAACTGTGTTTATTCAGATCTGATGAATGATCGCATGTTATTAAAGGATTATCGTTTGGTATAT GAGAATTCGGAAGAGATTCCAATTGCGAGATGTCCCGATGGTGGTAAGATCCACTCTGGTATTTATTTAAATCGTAGTAT GGAACAGAATGCAAATACATTAGATAGGAAAATCTATGATCAATTTGTAAAAGATTTATCTTATCAACAATTAAAAACTT AA
Upstream 100 bases:
>100_bases TTTTGGATTCATTGGTGTGAATCCAAGTGGCGAGATCGAAGAGGGTTTTTCTTCTCCGTTTGAGTTTCTGTTGTTTGCAT TGGTATATCAAACCATTCCA
Downstream 100 bases:
>100_bases TTTATATTATGTAATGAGGATAAGAAATATTGCCTTCCTGTAGCTAGAAACGTTTATCGATTTATATCTATTTTGAAAAA AACTATTTCTAATGAAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MHYSDFFIIQWWFTTFLFGFVIYYIFKTILSESDSFVLFLVFLCSVLLSISYTFLTWHSSGMENPWLHFFYLLCLLILFG LVEGKELSLAKNSILLFFASIVRIESVYHLSFVFIIFFVILYRQRSSVRKIYPVLMAIILWVIFFVIRSLYFGKIFPNTS TAQDLSLLENLNHLFTFNPSLIKNWEIFKIGFKQNLLLLIPINLGLFLFFRRSNRELNFFYLSFAFLLPGIFHPFLIGNF RLDPARPMTWMLAISSVLFIASIGSIFKQKKFIFILVFLLTCFISYKNYKLKSYDLCCSAKIFEDRKETILSISKQTEIQ LPLVAIADLDVMSFEKKLNVLDLGYLGNQFLARNKNDSKLIKSYISLQKPEILEIHFPWNCVYSDLMNDRMLLKDYRLVY ENSEEIPIARCPDGGKIHSGIYLNRSMEQNANTLDRKIYDQFVKDLSYQQLKT
Sequences:
>Translated_453_residues MHYSDFFIIQWWFTTFLFGFVIYYIFKTILSESDSFVLFLVFLCSVLLSISYTFLTWHSSGMENPWLHFFYLLCLLILFG LVEGKELSLAKNSILLFFASIVRIESVYHLSFVFIIFFVILYRQRSSVRKIYPVLMAIILWVIFFVIRSLYFGKIFPNTS TAQDLSLLENLNHLFTFNPSLIKNWEIFKIGFKQNLLLLIPINLGLFLFFRRSNRELNFFYLSFAFLLPGIFHPFLIGNF RLDPARPMTWMLAISSVLFIASIGSIFKQKKFIFILVFLLTCFISYKNYKLKSYDLCCSAKIFEDRKETILSISKQTEIQ LPLVAIADLDVMSFEKKLNVLDLGYLGNQFLARNKNDSKLIKSYISLQKPEILEIHFPWNCVYSDLMNDRMLLKDYRLVY ENSEEIPIARCPDGGKIHSGIYLNRSMEQNANTLDRKIYDQFVKDLSYQQLKT >Mature_453_residues MHYSDFFIIQWWFTTFLFGFVIYYIFKTILSESDSFVLFLVFLCSVLLSISYTFLTWHSSGMENPWLHFFYLLCLLILFG LVEGKELSLAKNSILLFFASIVRIESVYHLSFVFIIFFVILYRQRSSVRKIYPVLMAIILWVIFFVIRSLYFGKIFPNTS TAQDLSLLENLNHLFTFNPSLIKNWEIFKIGFKQNLLLLIPINLGLFLFFRRSNRELNFFYLSFAFLLPGIFHPFLIGNF RLDPARPMTWMLAISSVLFIASIGSIFKQKKFIFILVFLLTCFISYKNYKLKSYDLCCSAKIFEDRKETILSISKQTEIQ LPLVAIADLDVMSFEKKLNVLDLGYLGNQFLARNKNDSKLIKSYISLQKPEILEIHFPWNCVYSDLMNDRMLLKDYRLVY ENSEEIPIARCPDGGKIHSGIYLNRSMEQNANTLDRKIYDQFVKDLSYQQLKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53392; Mature: 53392
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYSDFFIIQWWFTTFLFGFVIYYIFKTILSESDSFVLFLVFLCSVLLSISYTFLTWHSS CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECC GMENPWLHFFYLLCLLILFGLVEGKELSLAKNSILLFFASIVRIESVYHLSFVFIIFFVI CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRQRSSVRKIYPVLMAIILWVIFFVIRSLYFGKIFPNTSTAQDLSLLENLNHLFTFNPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEECCHH LIKNWEIFKIGFKQNLLLLIPINLGLFLFFRRSNRELNFFYLSFAFLLPGIFHPFLIGNF HHCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCE RLDPARPMTWMLAISSVLFIASIGSIFKQKKFIFILVFLLTCFISYKNYKLKSYDLCCSA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECH KIFEDRKETILSISKQTEIQLPLVAIADLDVMSFEKKLNVLDLGYLGNQFLARNKNDSKL HHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHHHHHCCEEEECCCCCHHHHCCCCHHHH IKSYISLQKPEILEIHFPWNCVYSDLMNDRMLLKDYRLVYENSEEIPIARCPDGGKIHSG HHHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCEECCC IYLNRSMEQNANTLDRKIYDQFVKDLSYQQLKT EEEECCHHCCCHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MHYSDFFIIQWWFTTFLFGFVIYYIFKTILSESDSFVLFLVFLCSVLLSISYTFLTWHSS CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECC GMENPWLHFFYLLCLLILFGLVEGKELSLAKNSILLFFASIVRIESVYHLSFVFIIFFVI CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRQRSSVRKIYPVLMAIILWVIFFVIRSLYFGKIFPNTSTAQDLSLLENLNHLFTFNPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEECCHH LIKNWEIFKIGFKQNLLLLIPINLGLFLFFRRSNRELNFFYLSFAFLLPGIFHPFLIGNF HHCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCE RLDPARPMTWMLAISSVLFIASIGSIFKQKKFIFILVFLLTCFISYKNYKLKSYDLCCSA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEECH KIFEDRKETILSISKQTEIQLPLVAIADLDVMSFEKKLNVLDLGYLGNQFLARNKNDSKL HHHHHHHHHHHHHCCCCCEEECEEEEECCHHHHHHHHCCEEEECCCCCHHHHCCCCHHHH IKSYISLQKPEILEIHFPWNCVYSDLMNDRMLLKDYRLVYENSEEIPIARCPDGGKIHSG HHHHHHCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCEECCC IYLNRSMEQNANTLDRKIYDQFVKDLSYQQLKT EEEECCHHCCCHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA