Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 183221359

GI number: 183221359

Start: 2056576

End: 2057130

Strand: Reverse

Name: nusG [H]

Synonym: LEPBI_I1977

Alternate gene names: 183221359

Gene position: 2057130-2056576 (Counterclockwise)

Preceding gene: 183221360

Following gene: 183221358

Centisome position: 57.15

GC content: 41.26

Gene sequence:

>555_bases
GTGGGCGATTCTTTAGATAAAAAATGGTATGTGCTTCAGACTTATTCCGGTCACGAGAATAAGGTGAAAACAAACATTGA
AAAGATGGTCCAACAACAAAAACTGGAAGACCAAATTTTTTCGGTAAAAATTCCATCGATGGAAGTTGCCGAAATGAAAA
ACGGCAAAAAGAAGGTCACCAAGAAAAAACTCATGCCGGGTTATGTTCTTGTTGAGATGAACATGACGGATGACCTTCGA
TTTAAAATCCAGAACTTACCTTCTGTGTCTACGTTTGTAGGCGGAAAAGGAAAAGGTCCGGAACCACTTTCACTGGATGA
GATCAAAAATCTTTTCAGTGATGTGGGGAATGTGGAGTCGGAAGAAGTATCACGACCACGTTTCCTCTTCAAAGTGGGCG
AAACATTGAAAATTATAGATGGTCCGTTTGCGAATTTCACAGGACTTGTGGACGAAATTTTTCCTGATAAGGGAAGGCTT
CGTGTTCGAGTCGAAATTTTCGGAAGATCCACTCCCGTGGAGTTGGATTACCTCCAGGTAAAATCGGAACAATAG

Upstream 100 bases:

>100_bases
AGTTACAGTATTTATCTTTTCCCTATTTTTATCAGCTTCGGATTTTGTTTTCCTGAAGTTGTTAAAGTGGTTCTGGGCAT
TAGGAACATAGGTAAGAGTA

Downstream 100 bases:

>100_bases
AACTGGTAGATTGACTTTTAGTAAGGAACTTGAAACGAGATGGCTGCAAAGAAAGTAGTAAAACAAATTAAACTCCAAGT
AGAAGCAGGGAAAGCAAACC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MGDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVAEMKNGKKKVTKKKLMPGYVLVEMNMTDDLR
FKIQNLPSVSTFVGGKGKGPEPLSLDEIKNLFSDVGNVESEEVSRPRFLFKVGETLKIIDGPFANFTGLVDEIFPDKGRL
RVRVEIFGRSTPVELDYLQVKSEQ

Sequences:

>Translated_184_residues
MGDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVAEMKNGKKKVTKKKLMPGYVLVEMNMTDDLR
FKIQNLPSVSTFVGGKGKGPEPLSLDEIKNLFSDVGNVESEEVSRPRFLFKVGETLKIIDGPFANFTGLVDEIFPDKGRL
RVRVEIFGRSTPVELDYLQVKSEQ
>Mature_183_residues
GDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVAEMKNGKKKVTKKKLMPGYVLVEMNMTDDLRF
KIQNLPSVSTFVGGKGKGPEPLSLDEIKNLFSDVGNVESEEVSRPRFLFKVGETLKIIDGPFANFTGLVDEIFPDKGRLR
VRVEIFGRSTPVELDYLQVKSEQ

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=184, Percent_Identity=40.2173913043478, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20949; Mature: 20817

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVAEMKNGKKKVT
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHH
KKKLMPGYVLVEMNMTDDLRFKIQNLPSVSTFVGGKGKGPEPLSLDEIKNLFSDVGNVES
HHHCCCCEEEEEECCCCCEEEEECCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCH
EEVSRPRFLFKVGETLKIIDGPFANFTGLVDEIFPDKGRLRVRVEIFGRSTPVELDYLQV
HHCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEE
KSEQ
ECCC
>Mature Secondary Structure 
GDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVAEMKNGKKKVT
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHH
KKKLMPGYVLVEMNMTDDLRFKIQNLPSVSTFVGGKGKGPEPLSLDEIKNLFSDVGNVES
HHHCCCCEEEEEECCCCCEEEEECCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCH
EEVSRPRFLFKVGETLKIIDGPFANFTGLVDEIFPDKGRLRVRVEIFGRSTPVELDYLQV
HHCCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEE
KSEQ
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]