| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is rpmC
Identifier: 183221339
GI number: 183221339
Start: 2037252
End: 2037524
Strand: Reverse
Name: rpmC
Synonym: LEPBI_I1956
Alternate gene names: NA
Gene position: 2037524-2037252 (Counterclockwise)
Preceding gene: 183221340
Following gene: 183221338
Centisome position: 56.6
GC content: 39.93
Gene sequence:
>273_bases ATGAAAGACGATTTCAAATCACTTACTCCAGAAGATTTGAAGAAAGAAATTCTTTCCTCTTCCGAAGAAGTAAGAAAAGC AAGATTCCAATTTGGTGTCACAAGATCTCTTGAGAATCCAAAAGTAATCCGCAATCATAAGAAGAGAATTGCCCAAGCGT TGACGGTTCTTCGTGAGAAGGAACTCACTGCGAAAGGTAAACTCAAACAAATCGCACCAAAGGCTGGTTCAGCTCCAAAA GCTGCTAAAACGAGCAAAGGTAAGAAGAAGTAG
Upstream 100 bases:
>100_bases TTGAAATGGCTGGTGTTGATGAAGAAACAGCAAGAAAAGCACTTCATTTAGCAGCGTTCAAACTGCCAGTTGAAACTTCA TTTGTAAAGAGGAACGTTCT
Downstream 100 bases:
>100_bases GTTATGGAAGATAAAAACTCTAAAAAGTCTTTAACCATTCAGGGTGTAGTCGTGAGCGATGCTATGGATAAAACCGTAGT GATTGAAATCATCACAAGAA
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MKDDFKSLTPEDLKKEILSSSEEVRKARFQFGVTRSLENPKVIRNHKKRIAQALTVLREKELTAKGKLKQIAPKAGSAPK AAKTSKGKKK
Sequences:
>Translated_90_residues MKDDFKSLTPEDLKKEILSSSEEVRKARFQFGVTRSLENPKVIRNHKKRIAQALTVLREKELTAKGKLKQIAPKAGSAPK AAKTSKGKKK >Mature_90_residues MKDDFKSLTPEDLKKEILSSSEEVRKARFQFGVTRSLENPKVIRNHKKRIAQALTVLREKELTAKGKLKQIAPKAGSAPK AAKTSKGKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10088; Mature: 10088
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDDFKSLTPEDLKKEILSSSEEVRKARFQFGVTRSLENPKVIRNHKKRIAQALTVLREK CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELTAKGKLKQIAPKAGSAPKAAKTSKGKKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKDDFKSLTPEDLKKEILSSSEEVRKARFQFGVTRSLENPKVIRNHKKRIAQALTVLREK CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELTAKGKLKQIAPKAGSAPKAAKTSKGKKK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA