| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221166
Identifier: 183221166
GI number: 183221166
Start: 1857609
End: 1858214
Strand: Direct
Name: 183221166
Synonym: LEPBI_I1780
Alternate gene names: NA
Gene position: 1857609-1858214 (Clockwise)
Preceding gene: 183221165
Following gene: 183221167
Centisome position: 51.6
GC content: 36.96
Gene sequence:
>606_bases ATGAATCATAACGAAACCAAATCGATTGAAGAATGGATTTTTTTCTTCGAAAAAGAAGTTCCGACTCATGTAACAGAAAC CAGGTGGGAGCATATCAAAAAAGTGGCAAAAATTGCAGAAGATTTGGCAATCATTCACGAGCCAAAGAATCCAAAAAAAG CCTACTTAGCAGGTCTTTGTCATGACATTACCAAACAAAAAAAATCAGATATCCATATGAATTTATTTCGTGAGTTCCAT TTGGAAACAAATGGGATTCCCACCCAGGCCCTTCATGCCTATTCTGCCCCCTTATTCTTACAAAAACAGTATGGATTCTT CGATGAAGAAATCCAATCGGCCATCCAAAGCCATACTCTCGGGAATACAAATCCTTCTCTTTTGGACCAAATTGTATATG CAGCCGATTTTTTAGGATCAGATTTTGCCCAAAGGTCTCAGGAAATAGAAGTGTGGATACAAAAAACGAAGGAAAACCTT CATTTTGGGATTTTTATGAAGGCGTTTCAAACCATCTCGTTTCTCATGGAAAAAAAAGAAGTCATCCATCCCAATACTTT TTTTACATACAATCAATCAGCCCAATTTCTAAAGGAACACAGTTAA
Upstream 100 bases:
>100_bases GTAGCCAGGAGATTCGGAACCTATTAGAAAATGGATTAGAAATCAATTCCATTCTTCCAAAAACCAAAACATTACTTCTA AACATGTACAAACAATGAGA
Downstream 100 bases:
>100_bases ATGTTACGTGAGACCCAAGAAAAACAAACCATCCCTGCCAAAACCCTTCTATTGATTGCAGGTAGCTTTTTTGTCTTTGC ATTATTATTTTTATTCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNHNETKSIEEWIFFFEKEVPTHVTETRWEHIKKVAKIAEDLAIIHEPKNPKKAYLAGLCHDITKQKKSDIHMNLFREFH LETNGIPTQALHAYSAPLFLQKQYGFFDEEIQSAIQSHTLGNTNPSLLDQIVYAADFLGSDFAQRSQEIEVWIQKTKENL HFGIFMKAFQTISFLMEKKEVIHPNTFFTYNQSAQFLKEHS
Sequences:
>Translated_201_residues MNHNETKSIEEWIFFFEKEVPTHVTETRWEHIKKVAKIAEDLAIIHEPKNPKKAYLAGLCHDITKQKKSDIHMNLFREFH LETNGIPTQALHAYSAPLFLQKQYGFFDEEIQSAIQSHTLGNTNPSLLDQIVYAADFLGSDFAQRSQEIEVWIQKTKENL HFGIFMKAFQTISFLMEKKEVIHPNTFFTYNQSAQFLKEHS >Mature_201_residues MNHNETKSIEEWIFFFEKEVPTHVTETRWEHIKKVAKIAEDLAIIHEPKNPKKAYLAGLCHDITKQKKSDIHMNLFREFH LETNGIPTQALHAYSAPLFLQKQYGFFDEEIQSAIQSHTLGNTNPSLLDQIVYAADFLGSDFAQRSQEIEVWIQKTKENL HFGIFMKAFQTISFLMEKKEVIHPNTFFTYNQSAQFLKEHS
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005249 - InterPro: IPR004820 - InterPro: IPR003607 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 23515; Mature: 23515
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHNETKSIEEWIFFFEKEVPTHVTETRWEHIKKVAKIAEDLAIIHEPKNPKKAYLAGLC CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH HDITKQKKSDIHMNLFREFHLETNGIPTQALHAYSAPLFLQKQYGFFDEEIQSAIQSHTL HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCC GNTNPSLLDQIVYAADFLGSDFAQRSQEIEVWIQKTKENLHFGIFMKAFQTISFLMEKKE CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VIHPNTFFTYNQSAQFLKEHS HCCCCCEEEECCHHHHHHCCC >Mature Secondary Structure MNHNETKSIEEWIFFFEKEVPTHVTETRWEHIKKVAKIAEDLAIIHEPKNPKKAYLAGLC CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH HDITKQKKSDIHMNLFREFHLETNGIPTQALHAYSAPLFLQKQYGFFDEEIQSAIQSHTL HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCC GNTNPSLLDQIVYAADFLGSDFAQRSQEIEVWIQKTKENLHFGIFMKAFQTISFLMEKKE CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VIHPNTFFTYNQSAQFLKEHS HCCCCCEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]