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The map label for this gene is sdhC

Identifier: 183221083

GI number: 183221083

Start: 1769351

End: 1770040

Strand: Direct

Name: sdhC

Synonym: LEPBI_I1697

Alternate gene names: NA

Gene position: 1769351-1770040 (Clockwise)

Preceding gene: 183221080

Following gene: 183221084

Centisome position: 49.15

GC content: 42.9

Gene sequence:

>690_bases
ATGACGTTGAGTCTAGACTTCTTTCGATCCTCAATTGGAAAGAAGATCATAATGGCCATTACCGGATTTATCTGGTTTGG
ATTCGTGATCCTTCACATGGTCGGAAACCTACAAGTTTTCCAAGGACCAGAAAAATTAAACACCTATGCAAAGTTTCTCA
AAGATTTAGGACCCCTTCTCTGGGTGGCTCGGATTGGACTCATCGTGGCTTTTGTTGCTCACGTATGCACTGCCATTCTC
CTAAAACTAGAAAACAGTTCTGCTAGACCCGTCTCCTACGCTAAAAATTCTACCATCCAAGCATCAGTTGCCTCGCGCAC
GATGGCTTACAGTGGTTTATTACTTTTAACGTTTCTCATTTACCATTTAGCACATTTCACTTTGGGTTATACCAACCCAG
ACCACTACACTCACGAGTACATTTTAAAAAATGGAGATGTGGTGCATGATGTGTATGCGATGGTGATCCTTGGGTTCCAA
GACCCAACTATATCCATTTCCTACATCGTGTTCATGGTTTTCCTTGCCCTACACTTTTCCCATGCTTTGGGTTCCATGTT
ACAAACGCTTGGGATTCTGGCACCAAAACACAATCCCGCCATTCAAAAGATTTCCACAGGACTTGGTCTACTTGTCTTCA
TTGGAAATTGTTCCATGCCACTCTCGATTTTACTCGGGTATGTGCGTTAA

Upstream 100 bases:

>100_bases
TTTAGCCCTCATAAGATTTATGAATTTACGGAAAGTGGATTCCGTCTAAATCTGGACGTAATAGAAAATTTTACACCTAC
ACTCTAACAGGAGCTCTTCA

Downstream 100 bases:

>100_bases
GGGGATTTAGGAGAGAATATGAAATTAGATTCAAAAATACCATCAGGCCCATTGGAACAAAAATGGGACAAACACAAACA
AGACATCAAATTAGTGAACC

Product: succinate dehydrogenase cytochrome B subunit SdhC

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Succinate Dehydrogenase Subunit; Succinate Dehydrogenase Cytochrome; Fumarate Reductase Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; Succinate Dehydrogenease Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome B Subunit SdhC; Succinate Dehydrogenase Subunit C/Fumarate Reductase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTLSLDFFRSSIGKKIIMAITGFIWFGFVILHMVGNLQVFQGPEKLNTYAKFLKDLGPLLWVARIGLIVAFVAHVCTAIL
LKLENSSARPVSYAKNSTIQASVASRTMAYSGLLLLTFLIYHLAHFTLGYTNPDHYTHEYILKNGDVVHDVYAMVILGFQ
DPTISISYIVFMVFLALHFSHALGSMLQTLGILAPKHNPAIQKISTGLGLLVFIGNCSMPLSILLGYVR

Sequences:

>Translated_229_residues
MTLSLDFFRSSIGKKIIMAITGFIWFGFVILHMVGNLQVFQGPEKLNTYAKFLKDLGPLLWVARIGLIVAFVAHVCTAIL
LKLENSSARPVSYAKNSTIQASVASRTMAYSGLLLLTFLIYHLAHFTLGYTNPDHYTHEYILKNGDVVHDVYAMVILGFQ
DPTISISYIVFMVFLALHFSHALGSMLQTLGILAPKHNPAIQKISTGLGLLVFIGNCSMPLSILLGYVR
>Mature_228_residues
TLSLDFFRSSIGKKIIMAITGFIWFGFVILHMVGNLQVFQGPEKLNTYAKFLKDLGPLLWVARIGLIVAFVAHVCTAILL
KLENSSARPVSYAKNSTIQASVASRTMAYSGLLLLTFLIYHLAHFTLGYTNPDHYTHEYILKNGDVVHDVYAMVILGFQD
PTISISYIVFMVFLALHFSHALGSMLQTLGILAPKHNPAIQKISTGLGLLVFIGNCSMPLSILLGYVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 25339; Mature: 25207

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSLDFFRSSIGKKIIMAITGFIWFGFVILHMVGNLQVFQGPEKLNTYAKFLKDLGPLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHH
WVARIGLIVAFVAHVCTAILLKLENSSARPVSYAKNSTIQASVASRTMAYSGLLLLTFLI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YHLAHFTLGYTNPDHYTHEYILKNGDVVHDVYAMVILGFQDPTISISYIVFMVFLALHFS
HHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
HALGSMLQTLGILAPKHNPAIQKISTGLGLLVFIGNCSMPLSILLGYVR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure 
TLSLDFFRSSIGKKIIMAITGFIWFGFVILHMVGNLQVFQGPEKLNTYAKFLKDLGPLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHH
WVARIGLIVAFVAHVCTAILLKLENSSARPVSYAKNSTIQASVASRTMAYSGLLLLTFLI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YHLAHFTLGYTNPDHYTHEYILKNGDVVHDVYAMVILGFQDPTISISYIVFMVFLALHFS
HHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
HALGSMLQTLGILAPKHNPAIQKISTGLGLLVFIGNCSMPLSILLGYVR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA