| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220950
Identifier: 183220950
GI number: 183220950
Start: 1630443
End: 1631255
Strand: Direct
Name: 183220950
Synonym: LEPBI_I1563
Alternate gene names: NA
Gene position: 1630443-1631255 (Clockwise)
Preceding gene: 183220947
Following gene: 183220951
Centisome position: 45.29
GC content: 45.51
Gene sequence:
>813_bases ATGCACCTCAGTCCTTCTCCTTCCATGCAAATGACAGATTACCATTCCCGACGTTTGGGACTCAGTTTTGCGAGTGTCGG AGCTCGATTGGGATGGGTGTTTCTCGGCAAAGAATTGGTGTATGAATTTGGCCGGACAAGAGAAGAAGATTCGATTCGCC AATTGGTCACAAATGCCCTACCTGATTGGACCCGCACCATGGCCTTTTTAGCACCTGAGTCCCTCCATTCCTTCCAAGAA GAAGGACGGGAAATGGAAGCGTTTGTGGTCCGTTTGCCCGAGGGTGAAGTCCCTGTGTTTGTCATTCTACTATTAGAAAA GGGCCTCAGTCTTTTCCCAAGAGTTTGGGAAGATCTCTCAAACCAAGTGCTCACGTTTTGTGCGACGGGGATCTCTCTTC GGGAGAAGAACCTACTTGATTTTGAAACCATCACGGAACCCATCCGAAAACGAATGGGGAAAGCGTTCCAAGGGGATACC AAGTCAGGGGTCATCGCATTTTTCCATCTGCAAGACCTAAGTCCCTTTTTTAAACCCATGGGAGTCATCAAAAGCCAGGA AATTTTACGGGAAGTGACGGCAACCCTCCACAAAGAAACGAGGGAAAATGAATTCAATTTCCAAATGAACCCAAGGTCCT ATTTTTTATTTTGCCCAGGGGAAACCTTAGATGGAGCGAACCACAGGTTTGGATCCTTGTATTTCCCTTCAAAACACTTG ATTTTAGATTACAAATTGAAGATCTTCCCCATAGACAGTGAGATTTTGGCAGATGACGCCAAGTTTTCGTCGATTTTTCT TGAAAATTTCTAA
Upstream 100 bases:
>100_bases TTACTCCATTTTTGTGGTTGTGGGTAGGGAGCAAATCCTTTCTCCTTTTGAAACGAAGGGCAAAAACCGATACTATCACG TAAGAGCCATGACAGAACCA
Downstream 100 bases:
>100_bases AAGCATTTTTACGCCGAATTGACAAAATAGGGCGGTTCACGATACCGTCAAAACTAGACCATTTTTACAAAAGGACAGTT GTTTGTCTATGACCCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MHLSPSPSMQMTDYHSRRLGLSFASVGARLGWVFLGKELVYEFGRTREEDSIRQLVTNALPDWTRTMAFLAPESLHSFQE EGREMEAFVVRLPEGEVPVFVILLLEKGLSLFPRVWEDLSNQVLTFCATGISLREKNLLDFETITEPIRKRMGKAFQGDT KSGVIAFFHLQDLSPFFKPMGVIKSQEILREVTATLHKETRENEFNFQMNPRSYFLFCPGETLDGANHRFGSLYFPSKHL ILDYKLKIFPIDSEILADDAKFSSIFLENF
Sequences:
>Translated_270_residues MHLSPSPSMQMTDYHSRRLGLSFASVGARLGWVFLGKELVYEFGRTREEDSIRQLVTNALPDWTRTMAFLAPESLHSFQE EGREMEAFVVRLPEGEVPVFVILLLEKGLSLFPRVWEDLSNQVLTFCATGISLREKNLLDFETITEPIRKRMGKAFQGDT KSGVIAFFHLQDLSPFFKPMGVIKSQEILREVTATLHKETRENEFNFQMNPRSYFLFCPGETLDGANHRFGSLYFPSKHL ILDYKLKIFPIDSEILADDAKFSSIFLENF >Mature_270_residues MHLSPSPSMQMTDYHSRRLGLSFASVGARLGWVFLGKELVYEFGRTREEDSIRQLVTNALPDWTRTMAFLAPESLHSFQE EGREMEAFVVRLPEGEVPVFVILLLEKGLSLFPRVWEDLSNQVLTFCATGISLREKNLLDFETITEPIRKRMGKAFQGDT KSGVIAFFHLQDLSPFFKPMGVIKSQEILREVTATLHKETRENEFNFQMNPRSYFLFCPGETLDGANHRFGSLYFPSKHL ILDYKLKIFPIDSEILADDAKFSSIFLENF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31061; Mature: 31061
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSPSPSMQMTDYHSRRLGLSFASVGARLGWVFLGKELVYEFGRTREEDSIRQLVTNAL CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC PDWTRTMAFLAPESLHSFQEEGREMEAFVVRLPEGEVPVFVILLLEKGLSLFPRVWEDLS CHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHHHCCHHHHHHHHHHHH NQVLTFCATGISLREKNLLDFETITEPIRKRMGKAFQGDTKSGVIAFFHLQDLSPFFKPM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEEEEEHHCCHHHHHH GVIKSQEILREVTATLHKETRENEFNFQMNPRSYFLFCPGETLDGANHRFGSLYFPSKHL HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCCCEEECCCCEE ILDYKLKIFPIDSEILADDAKFSSIFLENF EEEEEEEEEECCHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MHLSPSPSMQMTDYHSRRLGLSFASVGARLGWVFLGKELVYEFGRTREEDSIRQLVTNAL CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC PDWTRTMAFLAPESLHSFQEEGREMEAFVVRLPEGEVPVFVILLLEKGLSLFPRVWEDLS CHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCEEHHHHHHCCHHHHHHHHHHHH NQVLTFCATGISLREKNLLDFETITEPIRKRMGKAFQGDTKSGVIAFFHLQDLSPFFKPM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCEEEEEEEHHCCHHHHHH GVIKSQEILREVTATLHKETRENEFNFQMNPRSYFLFCPGETLDGANHRFGSLYFPSKHL HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCCCEEECCCCEE ILDYKLKIFPIDSEILADDAKFSSIFLENF EEEEEEEEEECCHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA