Click here to switch to the map view.

The map label for this gene is 183220834

Identifier: 183220834

GI number: 183220834

Start: 1509832

End: 1511733

Strand: Reverse

Name: 183220834

Synonym: LEPBI_I1446

Alternate gene names: NA

Gene position: 1511733-1509832 (Counterclockwise)

Preceding gene: 183220836

Following gene: 183220826

Centisome position: 42.0

GC content: 42.22

Gene sequence:

>1902_bases
TTGTATAAATCCATGGCCAAACATCCATTCCCCCTCCAAAAAAAAATATATCTATTTGCCATAGGAATCACTCTTTTTCT
GTCCAATTGTTGGACCAATCCCCTCACCCCCCCCCCACTTGAATGTTTGATGAAGTTAAACAATTTTCTTTGTCCCGATA
ACGACTTTCTCAAAAAATATTCTCCTGGAATTTATCTTTTATTCTTACCAGACTCACGAGCAACGATTGCCAACCTCACA
AATCATTCGATTGTGGAAACTGGATTTGTTGTGGGAACAGCCCCAACTGATGTGAGTTTTGTGAATGTTGGTTTTGATGA
TGCCCAACCTTCAAGGATCCCCGTGATCAATGGAAGCTGGCGTGCTCCACTACCAGCAAAAGCGGTTACCAATACCTTTT
GGACCTATGGAAGTTTACATACCATCTATGTACACATTCCTTTTGAAAAATCCTATACCATCCTTGTTCGAAAAGGAAAC
AATAAAGATACGGATGGAGATGGGTATCCTGATTTGATCGTCTCTGCAAATTCATCTGCAGGAAACACAGGTTATGGATA
TGTATATACTACAAATCCCAGCACAAAACTTCTGAACTCGACACCTAATACGAATTTAACTGACGGAATCACTCAAACTT
ATTTTGGTTCTCGCATTGCATCGGGAGACTTCAACGGAGATGGATACGCTGATGTGATGGTTGGTGCCCAAGCCTACACT
ACTGGCACGAATTATTTAGGTAAATCTTATCTTTTCCTTAGCCGAGGACAAGCTGGGATCGCTTCACAAAATTTAAATAC
TGGTGGAGTTGCGGATGCAATCCTAGATGGATTGTCGATTACGGGAAGATTTGGTTCCAATATCATTGGAGCCGATATCA
ACGGCGACGGATATGATGATGGAATTTTTTCCTCTCCTTGGAATGATGAAGTGTTTATTTTTTATAGCCAAGGATCAGCA
TCGATTCAGTCACAAACTACCAATACTGCAAACGTAACCTACAAACCAGGAGTCAATGATAATTTCGGATCGTATGCGCA
GGCAGGTGATACCAACGGGGATGGTTATTTAGACCTATTAGTGAGTGCAGCCACATATTCCTCTAGTTTAGGGAGGATCT
ATATTTATGTTTCGAACCAAGGTTCCTTACCTGCGACCCCCAATCAAATGTTAGTTGCTCCACTGGAACCTTCACCGGGT
TGTGCTGCAGGAGTCGGCTGCCAATTTGGAGCAAATTTTGTTTTGGATTATTTTAATTCAGATCGTTGTATCGATCTTGC
CGTCGGTGGGCCCACCTTCAATACCTACCAAGGAATTGTATTTGTATACCATTCCACTTGTGATACCACAAATCCATATC
CAAACCCACCAGTGGCGACGCTCATTGGACCTATAACGAGTAGTTGCAACGGAATGAATTGTTTCTTTGGAGGTACACTA
GCATCTGGTGATGCCAATGGTGATGGAATTCCGGATTTACTGATTGGTGCCACAGGTGCCAGTTCAGGGATCGGTGACAC
TTATTTAGTGTTAAATGACCCAATCACGGGTTTTCCCAATATGGATTTAAGTGCTAGTGGATCTCCCAACAGTCTTTTTG
CTGGTTTGAATTCTGGGGGTAATTTTTCACAAGGCCTTAGGTTCCAAGACACCAATGCAGACGGACTCCAAGACATCGTC
ATCTCGGAACCAACAACGACCAATCAAGTGTACACCTTTCATAGTATTCGAGGTAGTGTTCCCACAAGTCAAAATTTGAA
CAATGCTGGAGTCGCAAGCCAAACCATCCTTCCTCCTGCAGGGACTTCGATTGGGAATACCATTGCATTATGGAAACAAA
CCGTAGAAAACTATTTTACCTTAGTTCTGAATCGTACTAAAAAAATCTTGAGATTCGGATAA

Upstream 100 bases:

>100_bases
GAAAGAAATTTTTTTCTTAAAATCCAACTTTATCCTAACTCCAAAGCCAATAATTGATTGCTTTCCAAAACTAGAAGCCA
AAACATCAATCCATTGTTAG

Downstream 100 bases:

>100_bases
ATCATAAAAGCCAAACATTCAAAGGTTTATACGTTGTTTTGCGAACTTAGGAATTCACACCAATAACAAAGTGATCATCA
TATGAAGTTACCACACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: FG-GAP Repeat-Containing Protein; FG-GAP Repeat Domain Protein; Integrins Alpha Chain; Alpha Inegrin Repeat-Containing Outer Membrane Protein; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MYKSMAKHPFPLQKKIYLFAIGITLFLSNCWTNPLTPPPLECLMKLNNFLCPDNDFLKKYSPGIYLLFLPDSRATIANLT
NHSIVETGFVVGTAPTDVSFVNVGFDDAQPSRIPVINGSWRAPLPAKAVTNTFWTYGSLHTIYVHIPFEKSYTILVRKGN
NKDTDGDGYPDLIVSANSSAGNTGYGYVYTTNPSTKLLNSTPNTNLTDGITQTYFGSRIASGDFNGDGYADVMVGAQAYT
TGTNYLGKSYLFLSRGQAGIASQNLNTGGVADAILDGLSITGRFGSNIIGADINGDGYDDGIFSSPWNDEVFIFYSQGSA
SIQSQTTNTANVTYKPGVNDNFGSYAQAGDTNGDGYLDLLVSAATYSSSLGRIYIYVSNQGSLPATPNQMLVAPLEPSPG
CAAGVGCQFGANFVLDYFNSDRCIDLAVGGPTFNTYQGIVFVYHSTCDTTNPYPNPPVATLIGPITSSCNGMNCFFGGTL
ASGDANGDGIPDLLIGATGASSGIGDTYLVLNDPITGFPNMDLSASGSPNSLFAGLNSGGNFSQGLRFQDTNADGLQDIV
ISEPTTTNQVYTFHSIRGSVPTSQNLNNAGVASQTILPPAGTSIGNTIALWKQTVENYFTLVLNRTKKILRFG

Sequences:

>Translated_633_residues
MYKSMAKHPFPLQKKIYLFAIGITLFLSNCWTNPLTPPPLECLMKLNNFLCPDNDFLKKYSPGIYLLFLPDSRATIANLT
NHSIVETGFVVGTAPTDVSFVNVGFDDAQPSRIPVINGSWRAPLPAKAVTNTFWTYGSLHTIYVHIPFEKSYTILVRKGN
NKDTDGDGYPDLIVSANSSAGNTGYGYVYTTNPSTKLLNSTPNTNLTDGITQTYFGSRIASGDFNGDGYADVMVGAQAYT
TGTNYLGKSYLFLSRGQAGIASQNLNTGGVADAILDGLSITGRFGSNIIGADINGDGYDDGIFSSPWNDEVFIFYSQGSA
SIQSQTTNTANVTYKPGVNDNFGSYAQAGDTNGDGYLDLLVSAATYSSSLGRIYIYVSNQGSLPATPNQMLVAPLEPSPG
CAAGVGCQFGANFVLDYFNSDRCIDLAVGGPTFNTYQGIVFVYHSTCDTTNPYPNPPVATLIGPITSSCNGMNCFFGGTL
ASGDANGDGIPDLLIGATGASSGIGDTYLVLNDPITGFPNMDLSASGSPNSLFAGLNSGGNFSQGLRFQDTNADGLQDIV
ISEPTTTNQVYTFHSIRGSVPTSQNLNNAGVASQTILPPAGTSIGNTIALWKQTVENYFTLVLNRTKKILRFG
>Mature_633_residues
MYKSMAKHPFPLQKKIYLFAIGITLFLSNCWTNPLTPPPLECLMKLNNFLCPDNDFLKKYSPGIYLLFLPDSRATIANLT
NHSIVETGFVVGTAPTDVSFVNVGFDDAQPSRIPVINGSWRAPLPAKAVTNTFWTYGSLHTIYVHIPFEKSYTILVRKGN
NKDTDGDGYPDLIVSANSSAGNTGYGYVYTTNPSTKLLNSTPNTNLTDGITQTYFGSRIASGDFNGDGYADVMVGAQAYT
TGTNYLGKSYLFLSRGQAGIASQNLNTGGVADAILDGLSITGRFGSNIIGADINGDGYDDGIFSSPWNDEVFIFYSQGSA
SIQSQTTNTANVTYKPGVNDNFGSYAQAGDTNGDGYLDLLVSAATYSSSLGRIYIYVSNQGSLPATPNQMLVAPLEPSPG
CAAGVGCQFGANFVLDYFNSDRCIDLAVGGPTFNTYQGIVFVYHSTCDTTNPYPNPPVATLIGPITSSCNGMNCFFGGTL
ASGDANGDGIPDLLIGATGASSGIGDTYLVLNDPITGFPNMDLSASGSPNSLFAGLNSGGNFSQGLRFQDTNADGLQDIV
ISEPTTTNQVYTFHSIRGSVPTSQNLNNAGVASQTILPPAGTSIGNTIALWKQTVENYFTLVLNRTKKILRFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI29171717, Length=178, Percent_Identity=32.5842696629214, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67215; Mature: 67215

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKSMAKHPFPLQKKIYLFAIGITLFLSNCWTNPLTPPPLECLMKLNNFLCPDNDFLKKY
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHC
SPGIYLLFLPDSRATIANLTNHSIVETGFVVGTAPTDVSFVNVGFDDAQPSRIPVINGSW
CCCEEEEEECCCCCEEEECCCCCEEECCEEEECCCCCEEEEEECCCCCCCCEEEEECCCC
RAPLPAKAVTNTFWTYGSLHTIYVHIPFEKSYTILVRKGNNKDTDGDGYPDLIVSANSSA
CCCCCHHHHHHHHEECCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCC
GNTGYGYVYTTNPSTKLLNSTPNTNLTDGITQTYFGSRIASGDFNGDGYADVMVGAQAYT
CCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHCCEECCCCCCCCCEEEEEECCEEEE
TGTNYLGKSYLFLSRGQAGIASQNLNTGGVADAILDGLSITGRFGSNIIGADINGDGYDD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCCCCC
GIFSSPWNDEVFIFYSQGSASIQSQTTNTANVTYKPGVNDNFGSYAQAGDTNGDGYLDLL
CCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
VSAATYSSSLGRIYIYVSNQGSLPATPNQMLVAPLEPSPGCAAGVGCQFGANFVLDYFNS
EEHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
DRCIDLAVGGPTFNTYQGIVFVYHSTCDTTNPYPNPPVATLIGPITSSCNGMNCFFGGTL
CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCEE
ASGDANGDGIPDLLIGATGASSGIGDTYLVLNDPITGFPNMDLSASGSPNSLFAGLNSGG
ECCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
NFSQGLRFQDTNADGLQDIVISEPTTTNQVYTFHSIRGSVPTSQNLNNAGVASQTILPPA
CHHCCCEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCC
GTSIGNTIALWKQTVENYFTLVLNRTKKILRFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKSMAKHPFPLQKKIYLFAIGITLFLSNCWTNPLTPPPLECLMKLNNFLCPDNDFLKKY
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHC
SPGIYLLFLPDSRATIANLTNHSIVETGFVVGTAPTDVSFVNVGFDDAQPSRIPVINGSW
CCCEEEEEECCCCCEEEECCCCCEEECCEEEECCCCCEEEEEECCCCCCCCEEEEECCCC
RAPLPAKAVTNTFWTYGSLHTIYVHIPFEKSYTILVRKGNNKDTDGDGYPDLIVSANSSA
CCCCCHHHHHHHHEECCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCC
GNTGYGYVYTTNPSTKLLNSTPNTNLTDGITQTYFGSRIASGDFNGDGYADVMVGAQAYT
CCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHCCEECCCCCCCCCEEEEEECCEEEE
TGTNYLGKSYLFLSRGQAGIASQNLNTGGVADAILDGLSITGRFGSNIIGADINGDGYDD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCCCCC
GIFSSPWNDEVFIFYSQGSASIQSQTTNTANVTYKPGVNDNFGSYAQAGDTNGDGYLDLL
CCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
VSAATYSSSLGRIYIYVSNQGSLPATPNQMLVAPLEPSPGCAAGVGCQFGANFVLDYFNS
EEHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
DRCIDLAVGGPTFNTYQGIVFVYHSTCDTTNPYPNPPVATLIGPITSSCNGMNCFFGGTL
CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCEE
ASGDANGDGIPDLLIGATGASSGIGDTYLVLNDPITGFPNMDLSASGSPNSLFAGLNSGG
ECCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
NFSQGLRFQDTNADGLQDIVISEPTTTNQVYTFHSIRGSVPTSQNLNNAGVASQTILPPA
CHHCCCEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCC
GTSIGNTIALWKQTVENYFTLVLNRTKKILRFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA