| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220824
Identifier: 183220824
GI number: 183220824
Start: 1501012
End: 1502106
Strand: Reverse
Name: 183220824
Synonym: LEPBI_I1436
Alternate gene names: NA
Gene position: 1502106-1501012 (Counterclockwise)
Preceding gene: 183220825
Following gene: 183220821
Centisome position: 41.73
GC content: 43.38
Gene sequence:
>1095_bases GTGACATTTCGGTTCTTCAACTACCCAATTCCCGTACTACTCGTAACTCTTGGTTTTTTTGCTGTACCATTTGTTATTTT TTTTGCCATTGCCTCCCTTTATGATTTGGATTTTGACCACGTGGGGATGATCCTCTCTCGGATCCAACCCTGGCAGTATG TCTTTTCCTTTTTAAGTGCCATCATCGCCTACGGCCTCATCACCAAAAAGAAGTTTGGTTATTACCTTTTCCTCTGTTTC ACGTTTCTCATCCTTACATATAATGTTTGGATGGTCTTGTCAGTCTCACTTGGGAAAAAATTCTTCCTTGCGGGCATCCG CATCAAAACAAATGACATTGTTTGGAACATGGCGATCACAACGGTGCTCCTTGCCATCGCCTTCTATTTTTTAAGAAGGG AAATTGCCGCTCCTTATTTGAGTGCCACTCGTCGCGGTTGGCGCTCCAAATACCGAGAGACTCACCCCATTCCGTTCCAT TGGACCAATGCCGATGGAGAAAGAGAAGGAGATGGACTCACCATCAACATTTCCAAAAACGGAGTCTTACTCCCTCTCAC CAAACATCATTTTTTAAAACCAGGAGACCCGATCAATTTACTCCTCACTTTGGAAAAAGAAAATAGGGATCCAGCCGCCA TCTCAGTACAAGGCAAGGTCGTTCGCATCGACAAAGAACCCGATGGAACCGAAATTGCAGGGGTCCAATTACAATTCCTC ATCCCCCAAAAAGAAGAAAAACAAATCTACGATTCGTTTTTATACCGAGTGTTTGCACCGCGTTACCCAGTTTCGAATCC CGTTTTGTTTTTTCCATCCGATGACAAAGCAAACCAAGGCACACTTCTCAATGTTTCCTTAGAAGGATTGTACATCGAAT CGGAATCAGTCCTATCAGCAGGGGAATCTTGTCGTGTGAAAATCCAAACAAGATCGGGTGAAATCTCTGTCGCAGGTATC GTAAGGTGGTCAAACCCACAAGGAAAGTATGGAAAACCGAGGGGTTTTGGAATCCAAATTGATTCGATTGAGAATCAAAA CTTATTTCGAGTTTGGATTTGGAAACAAAGGTTTAAAATCTTCCACGGTCGGTAA
Upstream 100 bases:
>100_bases AGTAGATGAAACAAACAAAATAGAACCGAGTTCTAAGGATGCTACATCCGAAGTTCAAAAATAAGTTGACTCAAGGCAAA AAAAGAAGTTTGATTTTCGG
Downstream 100 bases:
>100_bases ATTCGATTTAGTCCTCAATGTAGAGGGAATCCGCTAGAGTGAGATCGCCTGGACTTGTCACTTTGGTATTTCGAAAGTCT GTTTCGACAATTCCAACCTT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTFRFFNYPIPVLLVTLGFFAVPFVIFFAIASLYDLDFDHVGMILSRIQPWQYVFSFLSAIIAYGLITKKKFGYYLFLCF TFLILTYNVWMVLSVSLGKKFFLAGIRIKTNDIVWNMAITTVLLAIAFYFLRREIAAPYLSATRRGWRSKYRETHPIPFH WTNADGEREGDGLTINISKNGVLLPLTKHHFLKPGDPINLLLTLEKENRDPAAISVQGKVVRIDKEPDGTEIAGVQLQFL IPQKEEKQIYDSFLYRVFAPRYPVSNPVLFFPSDDKANQGTLLNVSLEGLYIESESVLSAGESCRVKIQTRSGEISVAGI VRWSNPQGKYGKPRGFGIQIDSIENQNLFRVWIWKQRFKIFHGR
Sequences:
>Translated_364_residues MTFRFFNYPIPVLLVTLGFFAVPFVIFFAIASLYDLDFDHVGMILSRIQPWQYVFSFLSAIIAYGLITKKKFGYYLFLCF TFLILTYNVWMVLSVSLGKKFFLAGIRIKTNDIVWNMAITTVLLAIAFYFLRREIAAPYLSATRRGWRSKYRETHPIPFH WTNADGEREGDGLTINISKNGVLLPLTKHHFLKPGDPINLLLTLEKENRDPAAISVQGKVVRIDKEPDGTEIAGVQLQFL IPQKEEKQIYDSFLYRVFAPRYPVSNPVLFFPSDDKANQGTLLNVSLEGLYIESESVLSAGESCRVKIQTRSGEISVAGI VRWSNPQGKYGKPRGFGIQIDSIENQNLFRVWIWKQRFKIFHGR >Mature_363_residues TFRFFNYPIPVLLVTLGFFAVPFVIFFAIASLYDLDFDHVGMILSRIQPWQYVFSFLSAIIAYGLITKKKFGYYLFLCFT FLILTYNVWMVLSVSLGKKFFLAGIRIKTNDIVWNMAITTVLLAIAFYFLRREIAAPYLSATRRGWRSKYRETHPIPFHW TNADGEREGDGLTINISKNGVLLPLTKHHFLKPGDPINLLLTLEKENRDPAAISVQGKVVRIDKEPDGTEIAGVQLQFLI PQKEEKQIYDSFLYRVFAPRYPVSNPVLFFPSDDKANQGTLLNVSLEGLYIESESVLSAGESCRVKIQTRSGEISVAGIV RWSNPQGKYGKPRGFGIQIDSIENQNLFRVWIWKQRFKIFHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41791; Mature: 41660
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS50007 PIPLC_X_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRFFNYPIPVLLVTLGFFAVPFVIFFAIASLYDLDFDHVGMILSRIQPWQYVFSFLSA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH IIAYGLITKKKFGYYLFLCFTFLILTYNVWMVLSVSLGKKFFLAGIRIKTNDIVWNMAIT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHCCCEEEEEEEEEEECCEEEHHHHH TVLLAIAFYFLRREIAAPYLSATRRGWRSKYRETHPIPFHWTNADGEREGDGLTINISKN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCC GVLLPLTKHHFLKPGDPINLLLTLEKENRDPAAISVQGKVVRIDKEPDGTEIAGVQLQFL CEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEE IPQKEEKQIYDSFLYRVFAPRYPVSNPVLFFPSDDKANQGTLLNVSLEGLYIESESVLSA CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEEEECHHHHCC GESCRVKIQTRSGEISVAGIVRWSNPQGKYGKPRGFGIQIDSIENQNLFRVWIWKQRFKI CCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEHHHH FHGR CCCC >Mature Secondary Structure TFRFFNYPIPVLLVTLGFFAVPFVIFFAIASLYDLDFDHVGMILSRIQPWQYVFSFLSA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH IIAYGLITKKKFGYYLFLCFTFLILTYNVWMVLSVSLGKKFFLAGIRIKTNDIVWNMAIT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHCCCEEEEEEEEEEECCEEEHHHHH TVLLAIAFYFLRREIAAPYLSATRRGWRSKYRETHPIPFHWTNADGEREGDGLTINISKN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCC GVLLPLTKHHFLKPGDPINLLLTLEKENRDPAAISVQGKVVRIDKEPDGTEIAGVQLQFL CEEEEEHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEE IPQKEEKQIYDSFLYRVFAPRYPVSNPVLFFPSDDKANQGTLLNVSLEGLYIESESVLSA CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEEEECHHHHCC GESCRVKIQTRSGEISVAGIVRWSNPQGKYGKPRGFGIQIDSIENQNLFRVWIWKQRFKI CCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEHHHH FHGR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA