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The map label for this gene is yebA [H]

Identifier: 183220774

GI number: 183220774

Start: 1441513

End: 1442514

Strand: Reverse

Name: yebA [H]

Synonym: LEPBI_I1385

Alternate gene names: 183220774

Gene position: 1442514-1441513 (Counterclockwise)

Preceding gene: 183220776

Following gene: 183220772

Centisome position: 40.07

GC content: 45.71

Gene sequence:

>1002_bases
TTGGCAGAAACTTACGTCACAACCGCCTACGAAAGGCTCCAAATTGCGCATTTACGGTGGCGAAAACGCTTACAAAAGTG
GATTTCCCGAAGCCGTGAGAAGGTGAGTTTTGTCCTCATCCCCAATGATGAAAAACCCCTCGCCCAAATCGAAATTTCTG
TCGGGATGCTTGGGTTTCTTTTTGGCCTTTCTCTTTCCCTTGTTTTATTGTCTTTTGGCCTCCTCCTTTATTTTTCCTTT
TTCTTTGAACGAAATCTTTCCTTAGAGAAAAAAACAGAAACCCAACTAGTATCGTTTTTGTTCTATGACCTTCTTTCCAA
AGACCTTCGGGAATCTGTGGAAGAATTGGAATCCATGACGGAATCACTCAATTTACTTGCTTGGGAGGAAATCCCCGAAA
AGGAAATGATCACACAAGACTACCTCTTAAAAGAAGAGTTTCGTAAGGATGCAAGTGAACTCGATTCCAATCTTTTACTC
TTCCAACAAGTGGTCACCACCTACACACAGTTTGGTGTGAGACTCGGTAACCTCGTTCCTAATTTTCAAAATGCCATCGA
TTATTTGTCCATGCGGGAAAGTATTTTTTATTCCATGCCTAGGGGTCGGCCCCTAAAACCTGGTGTGGGAGTTGTCACTT
CTACTTTTGGATACCGCAGTGATCCATTTGGAATCTTGCCTGTGGGGGAATACCATTCTGGGATTGACTTTGCAGCGGGA
GAAGGAACACCCATTTATGCCACAGGCCCTGGGATCATCGCCGTGGATACTGCTGTGGGTGGGCTTGGAAAATCGGTTCG
CATCAACCATGAAAATGGATTCTTTACCTTGTATGGGCACTGCTCTCAAATCCTCGTGAACCCAGGTGACCGCGTGAAAC
GGGGAGATAAAATTGCCCTTGTCGGCCAAACGGGTAAGGCAACGGGTGCTCACGTCCACTACGAAGTGCGGATTGGACTC
GATGCCCCGCTTGATCCTGAAGAATACATCAACTTAGATTGA

Upstream 100 bases:

>100_bases
CTTTCTGAAAAGAGAAGTGAGAAATTTAAACATATTGGATTCATCCACTTTCCCCTGAAAAATGGCATGGGCAAGGAAAA
AATTGGCTGGATAACGAACA

Downstream 100 bases:

>100_bases
ATGAAGCAGAAAGCCAAATTCGCATAACAATGATTTACTGTTTTCAATCACAAGTAGGCAAAATTCTAGCGACACTCATA
TAAAAAACCAACCTTCCTAG

Product: putative membrane associated metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAETYVTTAYERLQIAHLRWRKRLQKWISRSREKVSFVLIPNDEKPLAQIEISVGMLGFLFGLSLSLVLLSFGLLLYFSF
FFERNLSLEKKTETQLVSFLFYDLLSKDLRESVEELESMTESLNLLAWEEIPEKEMITQDYLLKEEFRKDASELDSNLLL
FQQVVTTYTQFGVRLGNLVPNFQNAIDYLSMRESIFYSMPRGRPLKPGVGVVTSTFGYRSDPFGILPVGEYHSGIDFAAG
EGTPIYATGPGIIAVDTAVGGLGKSVRINHENGFFTLYGHCSQILVNPGDRVKRGDKIALVGQTGKATGAHVHYEVRIGL
DAPLDPEEYINLD

Sequences:

>Translated_333_residues
MAETYVTTAYERLQIAHLRWRKRLQKWISRSREKVSFVLIPNDEKPLAQIEISVGMLGFLFGLSLSLVLLSFGLLLYFSF
FFERNLSLEKKTETQLVSFLFYDLLSKDLRESVEELESMTESLNLLAWEEIPEKEMITQDYLLKEEFRKDASELDSNLLL
FQQVVTTYTQFGVRLGNLVPNFQNAIDYLSMRESIFYSMPRGRPLKPGVGVVTSTFGYRSDPFGILPVGEYHSGIDFAAG
EGTPIYATGPGIIAVDTAVGGLGKSVRINHENGFFTLYGHCSQILVNPGDRVKRGDKIALVGQTGKATGAHVHYEVRIGL
DAPLDPEEYINLD
>Mature_332_residues
AETYVTTAYERLQIAHLRWRKRLQKWISRSREKVSFVLIPNDEKPLAQIEISVGMLGFLFGLSLSLVLLSFGLLLYFSFF
FERNLSLEKKTETQLVSFLFYDLLSKDLRESVEELESMTESLNLLAWEEIPEKEMITQDYLLKEEFRKDASELDSNLLLF
QQVVTTYTQFGVRLGNLVPNFQNAIDYLSMRESIFYSMPRGRPLKPGVGVVTSTFGYRSDPFGILPVGEYHSGIDFAAGE
GTPIYATGPGIIAVDTAVGGLGKSVRINHENGFFTLYGHCSQILVNPGDRVKRGDKIALVGQTGKATGAHVHYEVRIGLD
APLDPEEYINLD

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=91, Percent_Identity=48.3516483516484, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082174, Length=100, Percent_Identity=39, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37543; Mature: 37411

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETYVTTAYERLQIAHLRWRKRLQKWISRSREKVSFVLIPNDEKPLAQIEISVGMLGFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECCCCCCCEEEEEHHHHHHHH
FGLSLSLVLLSFGLLLYFSFFFERNLSLEKKTETQLVSFLFYDLLSKDLRESVEELESMT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNLLAWEEIPEKEMITQDYLLKEEFRKDASELDSNLLLFQQVVTTYTQFGVRLGNLVP
HHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFQNAIDYLSMRESIFYSMPRGRPLKPGVGVVTSTFGYRSDPFGILPVGEYHSGIDFAAG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCEECC
EGTPIYATGPGIIAVDTAVGGLGKSVRINHENGFFTLYGHCSQILVNPGDRVKRGDKIAL
CCCEEEEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCEEEECCCHHHCCCCEEEE
VGQTGKATGAHVHYEVRIGLDAPLDPEEYINLD
EECCCCCCCCEEEEEEEECCCCCCCHHHHCCCC
>Mature Secondary Structure 
AETYVTTAYERLQIAHLRWRKRLQKWISRSREKVSFVLIPNDEKPLAQIEISVGMLGFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEECCCCCCCEEEEEHHHHHHHH
FGLSLSLVLLSFGLLLYFSFFFERNLSLEKKTETQLVSFLFYDLLSKDLRESVEELESMT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNLLAWEEIPEKEMITQDYLLKEEFRKDASELDSNLLLFQQVVTTYTQFGVRLGNLVP
HHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFQNAIDYLSMRESIFYSMPRGRPLKPGVGVVTSTFGYRSDPFGILPVGEYHSGIDFAAG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCEECC
EGTPIYATGPGIIAVDTAVGGLGKSVRINHENGFFTLYGHCSQILVNPGDRVKRGDKIAL
CCCEEEEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCEEEECCCHHHCCCCEEEE
VGQTGKATGAHVHYEVRIGLDAPLDPEEYINLD
EECCCCCCCCEEEEEEEECCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]