| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220761
Identifier: 183220761
GI number: 183220761
Start: 1430887
End: 1431474
Strand: Direct
Name: 183220761
Synonym: LEPBI_I1372
Alternate gene names: NA
Gene position: 1430887-1431474 (Clockwise)
Preceding gene: 183220760
Following gene: 183220762
Centisome position: 39.75
GC content: 44.39
Gene sequence:
>588_bases ATGAAACAAAACATCTTTCGTGTTTTCGCACTCGTGGCATTAGTTTTTCTCGCAAATTGCGATTATAAAACTCCTGTTTA TGAATACTTTCCGAATATGTATGACTCTCCTGCAAGAGAGTCCCAAGAGGATGATTCCTTTGCATCGAATGGATCGGCAT CTCGCATTCCACCAAAGGGTGCCATCCCAGTGGGATACTTTCCATACCCTTATGCGGCAGAAGCAACTCCGGACACACTT CCTGGTGCCGATAAAGGATTAAAAAATCCGATTGGTAAGGCAAGTTTAGGGGATCTCATGATCGGAGAAAAACGTTACCA AACCTACTGCACACCATGCCATGGTGTCCAAGGTTTAGGAAACGGATCAGTTGTGGGACCGGCTCCAAAGTTCCAACAAC CACCTCCATCAGTTGTTTCTGAAAGAATACGTAGTTGGTCCGATGGACAAATCTACCACATCATCACGATGGGTCGGGGT CTTATGGGAAGTTATGCTTACCAAATCGAACCAGAAGACAGATGGAAGCTCATCGCTTACATCCGCAAACTTCAAGAATA TGAAGTGAAAAATAAAAAGGCGAACTAG
Upstream 100 bases:
>100_bases TTCCAAAGTCTGCTAAAGGGTATAACGAATCCGATGTGGTTTCGTTTGTGAAAAGCCTTGGTGGATCCGAAGTAACCGTT GTGAAACCGGAGAACCAAAA
Downstream 100 bases:
>100_bases GGGAAATTATGAGCTCTACAAAAGCAGCGAAACTAGACGAAACATTATTGCAGTTCAAACTGCCAGTGTCCGTTCGTAAT GCACTCATTGCCATGATCGG
Product: putative cytochrome c_like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKQNIFRVFALVALVFLANCDYKTPVYEYFPNMYDSPARESQEDDSFASNGSASRIPPKGAIPVGYFPYPYAAEATPDTL PGADKGLKNPIGKASLGDLMIGEKRYQTYCTPCHGVQGLGNGSVVGPAPKFQQPPPSVVSERIRSWSDGQIYHIITMGRG LMGSYAYQIEPEDRWKLIAYIRKLQEYEVKNKKAN
Sequences:
>Translated_195_residues MKQNIFRVFALVALVFLANCDYKTPVYEYFPNMYDSPARESQEDDSFASNGSASRIPPKGAIPVGYFPYPYAAEATPDTL PGADKGLKNPIGKASLGDLMIGEKRYQTYCTPCHGVQGLGNGSVVGPAPKFQQPPPSVVSERIRSWSDGQIYHIITMGRG LMGSYAYQIEPEDRWKLIAYIRKLQEYEVKNKKAN >Mature_195_residues MKQNIFRVFALVALVFLANCDYKTPVYEYFPNMYDSPARESQEDDSFASNGSASRIPPKGAIPVGYFPYPYAAEATPDTL PGADKGLKNPIGKASLGDLMIGEKRYQTYCTPCHGVQGLGNGSVVGPAPKFQQPPPSVVSERIRSWSDGQIYHIITMGRG LMGSYAYQIEPEDRWKLIAYIRKLQEYEVKNKKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21697; Mature: 21697
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNIFRVFALVALVFLANCDYKTPVYEYFPNMYDSPARESQEDDSFASNGSASRIPPKG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC AIPVGYFPYPYAAEATPDTLPGADKGLKNPIGKASLGDLMIGEKRYQTYCTPCHGVQGLG CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCC NGSVVGPAPKFQQPPPSVVSERIRSWSDGQIYHIITMGRGLMGSYAYQIEPEDRWKLIAY CCCEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHH IRKLQEYEVKNKKAN HHHHHHHHHHCCCCC >Mature Secondary Structure MKQNIFRVFALVALVFLANCDYKTPVYEYFPNMYDSPARESQEDDSFASNGSASRIPPKG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC AIPVGYFPYPYAAEATPDTLPGADKGLKNPIGKASLGDLMIGEKRYQTYCTPCHGVQGLG CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCC NGSVVGPAPKFQQPPPSVVSERIRSWSDGQIYHIITMGRGLMGSYAYQIEPEDRWKLIAY CCCEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHH IRKLQEYEVKNKKAN HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA