| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is arnT [H]
Identifier: 183220756
GI number: 183220756
Start: 1423226
End: 1424932
Strand: Direct
Name: arnT [H]
Synonym: LEPBI_I1367
Alternate gene names: 183220756
Gene position: 1423226-1424932 (Clockwise)
Preceding gene: 183220755
Following gene: 183220757
Centisome position: 39.54
GC content: 39.19
Gene sequence:
>1707_bases ATGAAAGAATCTCTCTCCGCATCGGAACGTATTTTTTATCGAATTTTACTCCTAATGGCGTCTTTGCCAATCCTTTTCAC ATTGCCACTTGATGTGATTGACATTGACAGTGCCCAATATGCAGGCATTAGCCGAGAACTTGTCCTTTCGAATGATTTTT TTACTCTCATCGACAATGGACGTCGCTATTTAGATAAACCCATCCTAACATTTTGGACGATAGCCACATCTTTTTTCTTT TTTGGAATCAATAACATTGCCTTTCGAATTCCAGCCATTTTCCTAAGTTTGCTTTCTGTTTATTCCATCTACCGCATCAC GATTTTGACAGGTGGAAAAGAAAGACAAGGATACCTTGCGTCACTTGCGTATTTACTGGCACCAGGTGTGTATGCCATGA TTGTCGATCCCAAAATCGATGTATATCTTACCGCCTATTTGGTGTTTACCTATCATTTTTACTATTTGGGTAGAAAACAA AATCCAAATTATTTTTATCTGATGTATCTCATGATGTCGATGGGCTTTATCACAAAGGGTCCCATTTCTGTTGTGATCCC TGCCATTTCCATTGGAGGAGACATCTTATTTCGCAGAGATTGGAAGTTGCTTTTTTCCATGAAAGTTCCGACAGGGATTT TTGTTTTAATTTCGTTACCGGCACTTTGGTGTTACTTCTTATACCAAAACTTCAATTCCTATGGTCCCGTTTTCTTTTTG TGGATCCAGTCTTTCGGTCGTTTTTACCGAGAAATGTATGATATCAAGTTTGATCCTTTTTATTTTTATAAATCCTTTTC TTGGGCATTCTTTAGCGGGCTTGTGCCCATGGTCATCTATCTTGTTTTCCATTCCTACCAATACACCAAATCACTTGGAT GGAAAGAGATCCTAAGAAAGATTCGTGCCAATGAATACAAAGAAGTGGATTATGTGATTCCCTTTTGGGTCTTTCTCTTT TTGTTTCTCATATCTTTTTCCCGATACCCACTGCCTCAGTATACCTATTGGGTACTTCCTGCGGCTGCTCTCTACTTTGG AAAGATCATGGAAGAGAGTCTGTTTCAGTCCAATGTCGCAAGACTCAGGCCATCCTTTCTCATCGCTGGTCTCGTGTATC TAGTTGGGTATTTTTTAATCCCCGTGTTTGTATCGGATGTTGGGATCTTGTACTATGTTTTCGGTGCGATTGGGATTGTT TTCATTTTGCTTTCGGCACAACTCATCCCTCTTGAAATTCTCATCACACTTGTGGGTGCGACTCTGTTTTTCTCTGCGAT CAGTTTGCAGTTTTATCCTCTCCTTACAAGTTACCAACCTTCGAAAGAATTTGGAGCAAAAATAAAGGAATTAGAACCAG AAGAACCTGTCGTTTATACATTTTGGATGTCCAATTCCAAACGATCCTATGGGTTTTATGCGGAACGAAATTTTCGTAAT ATCTATGATCGAGAGAAATTGGATAAACTTTGGTCCGAAAAACCGGAACGACTGATGATTTTACCATCTGAAAAATTGGA CCAATTGCGAGAGATGGTAGGATCTAGTTACGAAATCATCCCAGTTTTAGAGAAAGATGCCTTCAAAGTGGCCACACCTA CCATCACTTTCCTCAAGAAAGAGACAAGAAACCTTGTCACAAAGAAAATTTCTTTGGTTTGGGTGAAAAAAATGCAGGGG AAATCTTCTAAAAACTCGAAAGTATAA
Upstream 100 bases:
>100_bases GATGTACCACACATAATAGTGATATATTACAATGTTTTGACCAAGAACCAAACTCTTGCAAGGGGTTTGGACAATGCCTT GTCCAAATTGGTACATTTGA
Downstream 100 bases:
>100_bases CTAGGCTAAATTGTGTAAGTCTGGTTTTTAGGGCCCTTCGATGTCAAAGTCAGGGCCTTTTTTTTGCACAGGCCTTAGGA TCGATCCGAATTCCTTCCCT
Product: dolichyl-phosphate-mannose--protein mannosyltransferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MKESLSASERIFYRILLLMASLPILFTLPLDVIDIDSAQYAGISRELVLSNDFFTLIDNGRRYLDKPILTFWTIATSFFF FGINNIAFRIPAIFLSLLSVYSIYRITILTGGKERQGYLASLAYLLAPGVYAMIVDPKIDVYLTAYLVFTYHFYYLGRKQ NPNYFYLMYLMMSMGFITKGPISVVIPAISIGGDILFRRDWKLLFSMKVPTGIFVLISLPALWCYFLYQNFNSYGPVFFL WIQSFGRFYREMYDIKFDPFYFYKSFSWAFFSGLVPMVIYLVFHSYQYTKSLGWKEILRKIRANEYKEVDYVIPFWVFLF LFLISFSRYPLPQYTYWVLPAAALYFGKIMEESLFQSNVARLRPSFLIAGLVYLVGYFLIPVFVSDVGILYYVFGAIGIV FILLSAQLIPLEILITLVGATLFFSAISLQFYPLLTSYQPSKEFGAKIKELEPEEPVVYTFWMSNSKRSYGFYAERNFRN IYDREKLDKLWSEKPERLMILPSEKLDQLREMVGSSYEIIPVLEKDAFKVATPTITFLKKETRNLVTKKISLVWVKKMQG KSSKNSKV
Sequences:
>Translated_568_residues MKESLSASERIFYRILLLMASLPILFTLPLDVIDIDSAQYAGISRELVLSNDFFTLIDNGRRYLDKPILTFWTIATSFFF FGINNIAFRIPAIFLSLLSVYSIYRITILTGGKERQGYLASLAYLLAPGVYAMIVDPKIDVYLTAYLVFTYHFYYLGRKQ NPNYFYLMYLMMSMGFITKGPISVVIPAISIGGDILFRRDWKLLFSMKVPTGIFVLISLPALWCYFLYQNFNSYGPVFFL WIQSFGRFYREMYDIKFDPFYFYKSFSWAFFSGLVPMVIYLVFHSYQYTKSLGWKEILRKIRANEYKEVDYVIPFWVFLF LFLISFSRYPLPQYTYWVLPAAALYFGKIMEESLFQSNVARLRPSFLIAGLVYLVGYFLIPVFVSDVGILYYVFGAIGIV FILLSAQLIPLEILITLVGATLFFSAISLQFYPLLTSYQPSKEFGAKIKELEPEEPVVYTFWMSNSKRSYGFYAERNFRN IYDREKLDKLWSEKPERLMILPSEKLDQLREMVGSSYEIIPVLEKDAFKVATPTITFLKKETRNLVTKKISLVWVKKMQG KSSKNSKV >Mature_568_residues MKESLSASERIFYRILLLMASLPILFTLPLDVIDIDSAQYAGISRELVLSNDFFTLIDNGRRYLDKPILTFWTIATSFFF FGINNIAFRIPAIFLSLLSVYSIYRITILTGGKERQGYLASLAYLLAPGVYAMIVDPKIDVYLTAYLVFTYHFYYLGRKQ NPNYFYLMYLMMSMGFITKGPISVVIPAISIGGDILFRRDWKLLFSMKVPTGIFVLISLPALWCYFLYQNFNSYGPVFFL WIQSFGRFYREMYDIKFDPFYFYKSFSWAFFSGLVPMVIYLVFHSYQYTKSLGWKEILRKIRANEYKEVDYVIPFWVFLF LFLISFSRYPLPQYTYWVLPAAALYFGKIMEESLFQSNVARLRPSFLIAGLVYLVGYFLIPVFVSDVGILYYVFGAIGIV FILLSAQLIPLEILITLVGATLFFSAISLQFYPLLTSYQPSKEFGAKIKELEPEEPVVYTFWMSNSKRSYGFYAERNFRN IYDREKLDKLWSEKPERLMILPSEKLDQLREMVGSSYEIIPVLEKDAFKVATPTITFLKKETRNLVTKKISLVWVKKMQG KSSKNSKV
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=315, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 66313; Mature: 66313
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESLSASERIFYRILLLMASLPILFTLPLDVIDIDSAQYAGISRELVLSNDFFTLIDNG CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCHHCCCCCEEEECCCCEEEECCC RRYLDKPILTFWTIATSFFFFGINNIAFRIPAIFLSLLSVYSIYRITILTGGKERQGYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH SLAYLLAPGVYAMIVDPKIDVYLTAYLVFTYHFYYLGRKQNPNYFYLMYLMMSMGFITKG HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHCCCCCCC PISVVIPAISIGGDILFRRDWKLLFSMKVPTGIFVLISLPALWCYFLYQNFNSYGPVFFL CHHEEEEEEECCCCEEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH WIQSFGRFYREMYDIKFDPFYFYKSFSWAFFSGLVPMVIYLVFHSYQYTKSLGWKEILRK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IRANEYKEVDYVIPFWVFLFLFLISFSRYPLPQYTYWVLPAAALYFGKIMEESLFQSNVA HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRPSFLIAGLVYLVGYFLIPVFVSDVGILYYVFGAIGIVFILLSAQLIPLEILITLVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TLFFSAISLQFYPLLTSYQPSKEFGAKIKELEPEEPVVYTFWMSNSKRSYGFYAERNFRN HHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCEEECCHHH IYDREKLDKLWSEKPERLMILPSEKLDQLREMVGSSYEIIPVLEKDAFKVATPTITFLKK HHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCEEEECCHHHHHHH ETRNLVTKKISLVWVKKMQGKSSKNSKV HHHHHHHHHHHHHEEHHHCCCCCCCCCC >Mature Secondary Structure MKESLSASERIFYRILLLMASLPILFTLPLDVIDIDSAQYAGISRELVLSNDFFTLIDNG CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCHHCCCCCEEEECCCCEEEECCC RRYLDKPILTFWTIATSFFFFGINNIAFRIPAIFLSLLSVYSIYRITILTGGKERQGYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHH SLAYLLAPGVYAMIVDPKIDVYLTAYLVFTYHFYYLGRKQNPNYFYLMYLMMSMGFITKG HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHHHHCCCCCCC PISVVIPAISIGGDILFRRDWKLLFSMKVPTGIFVLISLPALWCYFLYQNFNSYGPVFFL CHHEEEEEEECCCCEEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH WIQSFGRFYREMYDIKFDPFYFYKSFSWAFFSGLVPMVIYLVFHSYQYTKSLGWKEILRK HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IRANEYKEVDYVIPFWVFLFLFLISFSRYPLPQYTYWVLPAAALYFGKIMEESLFQSNVA HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRPSFLIAGLVYLVGYFLIPVFVSDVGILYYVFGAIGIVFILLSAQLIPLEILITLVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TLFFSAISLQFYPLLTSYQPSKEFGAKIKELEPEEPVVYTFWMSNSKRSYGFYAERNFRN HHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCEEECCHHH IYDREKLDKLWSEKPERLMILPSEKLDQLREMVGSSYEIIPVLEKDAFKVATPTITFLKK HHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCEEEECCHHHHHHH ETRNLVTKKISLVWVKKMQGKSSKNSKV HHHHHHHHHHHHHEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA