| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220739
Identifier: 183220739
GI number: 183220739
Start: 1403820
End: 1405217
Strand: Direct
Name: 183220739
Synonym: LEPBI_I1349
Alternate gene names: NA
Gene position: 1403820-1405217 (Clockwise)
Preceding gene: 183220738
Following gene: 183220740
Centisome position: 39.0
GC content: 39.06
Gene sequence:
>1398_bases ATGAAACGGATTCTATTATTACTGTTACTTTGTGTAAGTCCGATGTTTGCTCGTGAGATGGGTGAATTCGTAAAAGACAT CCAATTCAAACCATTGGAATTTGAAGTGCCGAGTATCACTTCGATGACAAATGCGAGTGGGGTGGAAATATTCTCTTTAA AAAATGCAGAGTTCCCTATTGTTTATGCAGATATTCTCATTTATCATGGTAAAAAGAATTTGGGAAAACGCCCAACAGAA ATTGGTCGTTTGCTTGAAGATAGTTGGGAACTTTCTGGATCCACTTCCTATCCGAAGGAAAAGTTTTTGGAAACCTTGGA ATTTTACGGTGCTTCGTTTTCAGTTTCTGTTGATTATGAAAAAACAGTTTTTACGATCGCATACTTAAAAAAAACGGAAT CCGTTGTTTTGCCTATCATCCAATCATTTTTTGAAGCTCCCAACTTAGATGAAGGTCTCATCTCCATAACCAGGGGAAAA CTCGCTGAAGAGATCAATCGTCGTAGTGATAATGTAACTTCCCTTGCCAAAAGGAAAATCAAAGAAGCCATGTTCCAAGG TACCATTGCCGGCACATCCATGAAAAAATCAAATTTGGATGTCATTCAAAAAGAAGACCTTCTCAGATTCCAAAAAGAAA TTCTTTCTGCATCCAAACGGCGTCTACTCATCACAGGGGATTTTGATCTCAAAGCTTGGGAAACCTTTTTTCCAACACTA ACCAAAAACGAATCCTTCGAAGCAGAAATAATCACACCATCCTTATTGAGTGCCAATGTTTCGAAAGAAAACAAATGGAT CCGACTTGTGACCAAAGATGTCACACAATCTTATATCTCCCTTTCTGGTGTGTTGCCGGAACACAATCATCCGGATTTTT ATGCCATCCAAGTTTTGAATTATATCATCGGTGGTGGAGGATTTAACTCATATTATATGAGAGAAATTCGAAACAATCGA GGTTTAGCCTATACAGCGGGAAGTTTCACTGAATTTCAGGAAACTTATGGCACCGTCCAATTTTACGCCATGACCAAAAC GGAGTCGGCTAAAGAAGTTTTGGATTTGATGAAGGAACTCATCCAACCCAAACTCATCAATTCCTTAACGGAGGAAGAGT TGGTCCGAGCCAAAACTGCCATCATCAATACCTTTGTATTCCAGTTTGAAGATGATAAACGGACACTTGCCAGTGAAGTG AGAAGGCGTGATCACAAAATGCCTGAAGGTTATTTACAAAATTTTCGCCGTGAAATTGAAAAGGTGACATTGGCCGATTT GCAACGAGTCGGAAAACTCTATTTTCAATCGGATAAAATGATCACAACCATCGTTGGTCCAAAATCATTAGAAAGTTTTT GGAAAGGTTCTGTGAAACTCCTGCAACCGGAAGATTGA
Upstream 100 bases:
>100_bases TGAATACCTCAAGTAGTGATATTCAGGCATTAATTCCAAAATACCTCACGAAAGATTTGGTGATAGTCGGTGTCCTCGAA GACGGAAGGAAAAAATAAAC
Downstream 100 bases:
>100_bases TGTTAACAGCAAGTTTCGAATACAAAGGAACCAAATTTGAAGGGATATCAGAAGGGGGGATTCGTACATCCATCATCTGC CCTTCCCTTGATTTTATGTT
Product: putative metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKRILLLLLLCVSPMFAREMGEFVKDIQFKPLEFEVPSITSMTNASGVEIFSLKNAEFPIVYADILIYHGKKNLGKRPTE IGRLLEDSWELSGSTSYPKEKFLETLEFYGASFSVSVDYEKTVFTIAYLKKTESVVLPIIQSFFEAPNLDEGLISITRGK LAEEINRRSDNVTSLAKRKIKEAMFQGTIAGTSMKKSNLDVIQKEDLLRFQKEILSASKRRLLITGDFDLKAWETFFPTL TKNESFEAEIITPSLLSANVSKENKWIRLVTKDVTQSYISLSGVLPEHNHPDFYAIQVLNYIIGGGGFNSYYMREIRNNR GLAYTAGSFTEFQETYGTVQFYAMTKTESAKEVLDLMKELIQPKLINSLTEEELVRAKTAIINTFVFQFEDDKRTLASEV RRRDHKMPEGYLQNFRREIEKVTLADLQRVGKLYFQSDKMITTIVGPKSLESFWKGSVKLLQPED
Sequences:
>Translated_465_residues MKRILLLLLLCVSPMFAREMGEFVKDIQFKPLEFEVPSITSMTNASGVEIFSLKNAEFPIVYADILIYHGKKNLGKRPTE IGRLLEDSWELSGSTSYPKEKFLETLEFYGASFSVSVDYEKTVFTIAYLKKTESVVLPIIQSFFEAPNLDEGLISITRGK LAEEINRRSDNVTSLAKRKIKEAMFQGTIAGTSMKKSNLDVIQKEDLLRFQKEILSASKRRLLITGDFDLKAWETFFPTL TKNESFEAEIITPSLLSANVSKENKWIRLVTKDVTQSYISLSGVLPEHNHPDFYAIQVLNYIIGGGGFNSYYMREIRNNR GLAYTAGSFTEFQETYGTVQFYAMTKTESAKEVLDLMKELIQPKLINSLTEEELVRAKTAIINTFVFQFEDDKRTLASEV RRRDHKMPEGYLQNFRREIEKVTLADLQRVGKLYFQSDKMITTIVGPKSLESFWKGSVKLLQPED >Mature_465_residues MKRILLLLLLCVSPMFAREMGEFVKDIQFKPLEFEVPSITSMTNASGVEIFSLKNAEFPIVYADILIYHGKKNLGKRPTE IGRLLEDSWELSGSTSYPKEKFLETLEFYGASFSVSVDYEKTVFTIAYLKKTESVVLPIIQSFFEAPNLDEGLISITRGK LAEEINRRSDNVTSLAKRKIKEAMFQGTIAGTSMKKSNLDVIQKEDLLRFQKEILSASKRRLLITGDFDLKAWETFFPTL TKNESFEAEIITPSLLSANVSKENKWIRLVTKDVTQSYISLSGVLPEHNHPDFYAIQVLNYIIGGGGFNSYYMREIRNNR GLAYTAGSFTEFQETYGTVQFYAMTKTESAKEVLDLMKELIQPKLINSLTEEELVRAKTAIINTFVFQFEDDKRTLASEV RRRDHKMPEGYLQNFRREIEKVTLADLQRVGKLYFQSDKMITTIVGPKSLESFWKGSVKLLQPED
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 53212; Mature: 53212
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLLLLLCVSPMFAREMGEFVKDIQFKPLEFEVPSITSMTNASGVEIFSLKNAEFPI CHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCE VYADILIYHGKKNLGKRPTEIGRLLEDSWELSGSTSYPKEKFLETLEFYGASFSVSVDYE EEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCC KTVFTIAYLKKTESVVLPIIQSFFEAPNLDEGLISITRGKLAEEINRRSDNVTSLAKRKI HHEEEHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KEAMFQGTIAGTSMKKSNLDVIQKEDLLRFQKEILSASKRRLLITGDFDLKAWETFFPTL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCC TKNESFEAEIITPSLLSANVSKENKWIRLVTKDVTQSYISLSGVLPEHNHPDFYAIQVLN CCCCCCCEEEECHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YIIGGGGFNSYYMREIRNNRGLAYTAGSFTEFQETYGTVQFYAMTKTESAKEVLDLMKEL HHHCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH IQPKLINSLTEEELVRAKTAIINTFVFQFEDDKRTLASEVRRRDHKMPEGYLQNFRREIE HCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KVTLADLQRVGKLYFQSDKMITTIVGPKSLESFWKGSVKLLQPED HHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCEEEECCCC >Mature Secondary Structure MKRILLLLLLCVSPMFAREMGEFVKDIQFKPLEFEVPSITSMTNASGVEIFSLKNAEFPI CHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCE VYADILIYHGKKNLGKRPTEIGRLLEDSWELSGSTSYPKEKFLETLEFYGASFSVSVDYE EEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCC KTVFTIAYLKKTESVVLPIIQSFFEAPNLDEGLISITRGKLAEEINRRSDNVTSLAKRKI HHEEEHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KEAMFQGTIAGTSMKKSNLDVIQKEDLLRFQKEILSASKRRLLITGDFDLKAWETFFPTL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCC TKNESFEAEIITPSLLSANVSKENKWIRLVTKDVTQSYISLSGVLPEHNHPDFYAIQVLN CCCCCCCEEEECHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YIIGGGGFNSYYMREIRNNRGLAYTAGSFTEFQETYGTVQFYAMTKTESAKEVLDLMKEL HHHCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH IQPKLINSLTEEELVRAKTAIINTFVFQFEDDKRTLASEVRRRDHKMPEGYLQNFRREIE HCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KVTLADLQRVGKLYFQSDKMITTIVGPKSLESFWKGSVKLLQPED HHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]