| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220732
Identifier: 183220732
GI number: 183220732
Start: 1397220
End: 1398488
Strand: Direct
Name: 183220732
Synonym: LEPBI_I1342
Alternate gene names: NA
Gene position: 1397220-1398488 (Clockwise)
Preceding gene: 183220731
Following gene: 183220733
Centisome position: 38.82
GC content: 42.0
Gene sequence:
>1269_bases TTGAGTATGGACAAAGAAATCAAAGACCCTGAAGGTATTTTGAAGGTAATTACCGCCTTATTTGGAAAATTACCGGCATA CATCGTCAACTCAGAGAAAGAATTCCCTGTCAAAATCATTGCACTCAAAAACAAAGCCCTCATCATCAGCACCAAATTAA AATTCCCTAACCGGGATCGTGTGCTTACCGTTGTTCATAATGGAAGCAAATTCTTTGCTCACTTCAACCTGGCTGGTGGA GATGGGAACGGGGTTGAGATTCTAACTCCTGTTAAGATTCAGATCGCTGCTGCTTCCAGACAAGGAGCTCGGGTAGAAGC AAGTCAAATCCAAACTGGGATGGTGGTGAACAATATCATCAACGTCAATGATGTATCGAAGGCCATTGGCTTTGATGATA AAAAAGTGGACGCGATTCTACTTGCATATCGTGCCAAACTCGCAAAGGCCTTCCCATTATCTTCTATCTTTTTTGCAGGT AGGATGGACAACCGCCTGCGACTCATGCACCATTATGATAAAGATATCTTTATTGTGGATCGTAAAGAAAAGGCCACGGC TTCCCCTGAATTTTTCCCGTTTGATGAATACCTTCGAATTTTCGACAATTCTAAAATCCCGGACAACTACATTTCCGAAA TTTGTGTTCCCATCAAATATAAAGGTTATGTTCACCTTGGGTATGTACAAGTGTTAGCCGAAAAGCCACTTGATTTTGAA GTGTACAAACAAATCCAAACCTTTGCTTCAGCAGTGAGTCGAGATATCATCAATACGGGAGTGTTCCAAGAGTCGCGCGA CGTCTGCCAAGTAATGGACCTAAGTATGGGCGGGATTAGTTTCATCCATGCACCATCTCGGTCCTTTTCACGTTCTGTCA CACTCAATGGAACCATCCTTTTTGATCTCAATTTGGAAGCAGGGAAAAAAGTCACCATCCGTGGGATCATCAAAAACATT CGAAACCAAGAAACGAACTTTCGAGTGGGTTGCCAATTCTACAACCTAACAGAAAAAGACACAGAAATTTTGGAAGATTT TTTAAATGTAGGCAAAGAAGAAGAAACTCCCGAAGCAGTCACGTCCACTTCTTCTGAAGATGAAACTCCAATTCCAGAGA CAAACGAGGAAGACCAAGATAGTGAAGAATCTTCGTCAATCGAAGAAGAAAATTTTTCCGAAGGACCGGCAGAAGAAAGT TCCACCGAAGATCCATTTGCCAATCAAATGGACGAAGAGTTTACGGATTCTCCCGAAGAACCAAAGTAA
Upstream 100 bases:
>100_bases TACAAAAATATTCGGAAGAACTAAAACAGTCTATGAGTGTGACAGGTGCGAAAACTTTGGTAGACATCAAGCGTTCCATG TTACTTCATAAACAACACGG
Downstream 100 bases:
>100_bases ATGGTTGGTTATCAGTCTGTCATTCGCCCCCCCTTTGTGGGAAAAACGGTGATTGAATATCTTACAGGAAAATTTCCTTA CCATAGTCTCGAGGAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSMDKEIKDPEGILKVITALFGKLPAYIVNSEKEFPVKIIALKNKALIISTKLKFPNRDRVLTVVHNGSKFFAHFNLAGG DGNGVEILTPVKIQIAAASRQGARVEASQIQTGMVVNNIINVNDVSKAIGFDDKKVDAILLAYRAKLAKAFPLSSIFFAG RMDNRLRLMHHYDKDIFIVDRKEKATASPEFFPFDEYLRIFDNSKIPDNYISEICVPIKYKGYVHLGYVQVLAEKPLDFE VYKQIQTFASAVSRDIINTGVFQESRDVCQVMDLSMGGISFIHAPSRSFSRSVTLNGTILFDLNLEAGKKVTIRGIIKNI RNQETNFRVGCQFYNLTEKDTEILEDFLNVGKEEETPEAVTSTSSEDETPIPETNEEDQDSEESSSIEEENFSEGPAEES STEDPFANQMDEEFTDSPEEPK
Sequences:
>Translated_422_residues MSMDKEIKDPEGILKVITALFGKLPAYIVNSEKEFPVKIIALKNKALIISTKLKFPNRDRVLTVVHNGSKFFAHFNLAGG DGNGVEILTPVKIQIAAASRQGARVEASQIQTGMVVNNIINVNDVSKAIGFDDKKVDAILLAYRAKLAKAFPLSSIFFAG RMDNRLRLMHHYDKDIFIVDRKEKATASPEFFPFDEYLRIFDNSKIPDNYISEICVPIKYKGYVHLGYVQVLAEKPLDFE VYKQIQTFASAVSRDIINTGVFQESRDVCQVMDLSMGGISFIHAPSRSFSRSVTLNGTILFDLNLEAGKKVTIRGIIKNI RNQETNFRVGCQFYNLTEKDTEILEDFLNVGKEEETPEAVTSTSSEDETPIPETNEEDQDSEESSSIEEENFSEGPAEES STEDPFANQMDEEFTDSPEEPK >Mature_421_residues SMDKEIKDPEGILKVITALFGKLPAYIVNSEKEFPVKIIALKNKALIISTKLKFPNRDRVLTVVHNGSKFFAHFNLAGGD GNGVEILTPVKIQIAAASRQGARVEASQIQTGMVVNNIINVNDVSKAIGFDDKKVDAILLAYRAKLAKAFPLSSIFFAGR MDNRLRLMHHYDKDIFIVDRKEKATASPEFFPFDEYLRIFDNSKIPDNYISEICVPIKYKGYVHLGYVQVLAEKPLDFEV YKQIQTFASAVSRDIINTGVFQESRDVCQVMDLSMGGISFIHAPSRSFSRSVTLNGTILFDLNLEAGKKVTIRGIIKNIR NQETNFRVGCQFYNLTEKDTEILEDFLNVGKEEETPEAVTSTSSEDETPIPETNEEDQDSEESSSIEEENFSEGPAEESS TEDPFANQMDEEFTDSPEEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47343; Mature: 47212
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDKEIKDPEGILKVITALFGKLPAYIVNSEKEFPVKIIALKNKALIISTKLKFPNRDR CCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCCC VLTVVHNGSKFFAHFNLAGGDGNGVEILTPVKIQIAAASRQGARVEASQIQTGMVVNNII EEEEEECCCEEEEEEEEECCCCCCEEEEECEEEEEEECCCCCCEEEHHHHHCCHHHHHEE NVNDVSKAIGFDDKKVDAILLAYRAKLAKAFPLSSIFFAGRMDNRLRLMHHYDKDIFIVD CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHCCCCEEEEE RKEKATASPEFFPFDEYLRIFDNSKIPDNYISEICVPIKYKGYVHLGYVQVLAEKPLDFE CCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEEECCEEEEHHHHHHHCCCCCHH VYKQIQTFASAVSRDIINTGVFQESRDVCQVMDLSMGGISFIHAPSRSFSRSVTLNGTIL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECEEEE FDLNLEAGKKVTIRGIIKNIRNQETNFRVGCQFYNLTEKDTEILEDFLNVGKEEETPEAV EEEECCCCCEEEHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHH TSTSSEDETPIPETNEEDQDSEESSSIEEENFSEGPAEESSTEDPFANQMDEEFTDSPEE HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PK CC >Mature Secondary Structure SMDKEIKDPEGILKVITALFGKLPAYIVNSEKEFPVKIIALKNKALIISTKLKFPNRDR CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCCC VLTVVHNGSKFFAHFNLAGGDGNGVEILTPVKIQIAAASRQGARVEASQIQTGMVVNNII EEEEEECCCEEEEEEEEECCCCCCEEEEECEEEEEEECCCCCCEEEHHHHHCCHHHHHEE NVNDVSKAIGFDDKKVDAILLAYRAKLAKAFPLSSIFFAGRMDNRLRLMHHYDKDIFIVD CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHCCCCEEEEE RKEKATASPEFFPFDEYLRIFDNSKIPDNYISEICVPIKYKGYVHLGYVQVLAEKPLDFE CCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEEECCEEEEHHHHHHHCCCCCHH VYKQIQTFASAVSRDIINTGVFQESRDVCQVMDLSMGGISFIHAPSRSFSRSVTLNGTIL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECEEEE FDLNLEAGKKVTIRGIIKNIRNQETNFRVGCQFYNLTEKDTEILEDFLNVGKEEETPEAV EEEECCCCCEEEHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHH TSTSSEDETPIPETNEEDQDSEESSSIEEENFSEGPAEESSTEDPFANQMDEEFTDSPEE HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA