| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220729
Identifier: 183220729
GI number: 183220729
Start: 1392979
End: 1393830
Strand: Direct
Name: 183220729
Synonym: LEPBI_I1339
Alternate gene names: NA
Gene position: 1392979-1393830 (Clockwise)
Preceding gene: 183220728
Following gene: 183220730
Centisome position: 38.7
GC content: 45.07
Gene sequence:
>852_bases ATGTGTGTTCCAAACCCAACACGAAACCAATCACCACTTTCTCCTTCTTCCCCCACAAACCATTCCTCCTTTCCTGTTTC CCATTTGATCCAAAGATCACTTCCCCCCCATACGAAAATTCAAGTCTTCGATACAGGGATTTCGCTTATGTTACTTGGAT TCCGTTCGGGAGAGGAATCGGTTTCCTTTTTATGGGATACGGGTTCTGAGATCAGTTTTTATGAAGGGAAGGATCGTTTG TATTCCAAGGAATTCCAGATTGGTGAGAGAAAACTCCAAATCCGAAGGGGAGAGGGAATTTTACCTGAAGGCATCCAAGG CCTCATGGGGCTCGACAGCTTTCGCGGCACTTGCCTATTGTATGACCAAAACACAATCTATTGGTTTATCGGTGATTCTC CCTTTTGTGTCCACCCAGATGCCTACCTTGGCACCCAGTTGAAATTTTTAACCACAAAACAAAAAGGAGACCACAGCTTT GTCCTTTTTGAATACCCAAAATCCTTTGTATCCTACGCGCATTTGGACACAGGCGCTTCCTTATCCATTTTACCCAAAGG AGAAGGGGAGACCTTTCTTGGGGAAAAAAGAGTGTTTCGTCCAGGAAATACCATCCTCACCCTAAACCATTGGCAATCGA AGGAACCACTCACACTCATCTCCCAATCGGGATTTCGGGAAGAATACCCACAGGTTCAGTTTCTAACAGGAATTTCACTT GAGAATTTCCTTTTATCGGGGGACAAGGATAAGGAAGAGGTTTGGGTGATCGGACTTGATGTGTTAAGGACTCGTCCACT GTTTTGGGATTTTTCCCGGAAACGGATCGGCATCATCCACCAAGAGAACTAA
Upstream 100 bases:
>100_bases CTGGGATTGAATACAGAGATTGTACGGTAGATTATTCCAGATGCCCACATTCTCGTTGTATCAAAAAATTGGTTTAGTTT TCCTCTGCCTCAGTGTTGGG
Downstream 100 bases:
>100_bases GGTGAAAGAAAAAGAAAAAATCATAGTGGCGATGAGTGGTGGAGTGGACAGTGCGGTGGCTGCGGGACTTCTCATGGAAG CGGGTTACGATGTCATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MCVPNPTRNQSPLSPSSPTNHSSFPVSHLIQRSLPPHTKIQVFDTGISLMLLGFRSGEESVSFLWDTGSEISFYEGKDRL YSKEFQIGERKLQIRRGEGILPEGIQGLMGLDSFRGTCLLYDQNTIYWFIGDSPFCVHPDAYLGTQLKFLTTKQKGDHSF VLFEYPKSFVSYAHLDTGASLSILPKGEGETFLGEKRVFRPGNTILTLNHWQSKEPLTLISQSGFREEYPQVQFLTGISL ENFLLSGDKDKEEVWVIGLDVLRTRPLFWDFSRKRIGIIHQEN
Sequences:
>Translated_283_residues MCVPNPTRNQSPLSPSSPTNHSSFPVSHLIQRSLPPHTKIQVFDTGISLMLLGFRSGEESVSFLWDTGSEISFYEGKDRL YSKEFQIGERKLQIRRGEGILPEGIQGLMGLDSFRGTCLLYDQNTIYWFIGDSPFCVHPDAYLGTQLKFLTTKQKGDHSF VLFEYPKSFVSYAHLDTGASLSILPKGEGETFLGEKRVFRPGNTILTLNHWQSKEPLTLISQSGFREEYPQVQFLTGISL ENFLLSGDKDKEEVWVIGLDVLRTRPLFWDFSRKRIGIIHQEN >Mature_283_residues MCVPNPTRNQSPLSPSSPTNHSSFPVSHLIQRSLPPHTKIQVFDTGISLMLLGFRSGEESVSFLWDTGSEISFYEGKDRL YSKEFQIGERKLQIRRGEGILPEGIQGLMGLDSFRGTCLLYDQNTIYWFIGDSPFCVHPDAYLGTQLKFLTTKQKGDHSF VLFEYPKSFVSYAHLDTGASLSILPKGEGETFLGEKRVFRPGNTILTLNHWQSKEPLTLISQSGFREEYPQVQFLTGISL ENFLLSGDKDKEEVWVIGLDVLRTRPLFWDFSRKRIGIIHQEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32200; Mature: 32200
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVPNPTRNQSPLSPSSPTNHSSFPVSHLIQRSLPPHTKIQVFDTGISLMLLGFRSGEES CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCC VSFLWDTGSEISFYEGKDRLYSKEFQIGERKLQIRRGEGILPEGIQGLMGLDSFRGTCLL EEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEE YDQNTIYWFIGDSPFCVHPDAYLGTQLKFLTTKQKGDHSFVLFEYPKSFVSYAHLDTGAS EECCEEEEEECCCCEEECCCHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCCE LSILPKGEGETFLGEKRVFRPGNTILTLNHWQSKEPLTLISQSGFREEYPQVQFLTGISL EEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEECCCCHHHCCCEEEEECCCH ENFLLSGDKDKEEVWVIGLDVLRTRPLFWDFSRKRIGIIHQEN HHEEECCCCCCCEEEEEEEHHHHCCCCEEECCCCEEEEEEECC >Mature Secondary Structure MCVPNPTRNQSPLSPSSPTNHSSFPVSHLIQRSLPPHTKIQVFDTGISLMLLGFRSGEES CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCC VSFLWDTGSEISFYEGKDRLYSKEFQIGERKLQIRRGEGILPEGIQGLMGLDSFRGTCLL EEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEE YDQNTIYWFIGDSPFCVHPDAYLGTQLKFLTTKQKGDHSFVLFEYPKSFVSYAHLDTGAS EECCEEEEEECCCCEEECCCHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCCE LSILPKGEGETFLGEKRVFRPGNTILTLNHWQSKEPLTLISQSGFREEYPQVQFLTGISL EEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEECCCCHHHCCCEEEEECCCH ENFLLSGDKDKEEVWVIGLDVLRTRPLFWDFSRKRIGIIHQEN HHEEECCCCCCCEEEEEEEHHHHCCCCEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA