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The map label for this gene is rsmI

Identifier: 183220718

GI number: 183220718

Start: 1382901

End: 1383623

Strand: Reverse

Name: rsmI

Synonym: LEPBI_I1328

Alternate gene names: 183220718

Gene position: 1383623-1382901 (Counterclockwise)

Preceding gene: 183220719

Following gene: 183220717

Centisome position: 38.44

GC content: 45.92

Gene sequence:

>723_bases
TTGGCTTATAAACGAGAAAAAGGACTACTGTATGTCGTGGCCACTCCCATTGGCAATATGGGAGACATCACTCTGCGCGC
CATTGACGTTTTAAAAGAAGTGGATCTCGTACTCTGTGAATCTGCAAAAGAAACCAAATCCCTCTTTCACAAACTGGGAA
TCAGTACACCTGTGCTTGCCCTTTACAAAGACCACTCCGAAACTCCCTTTGCCAATGTCCTCGAACAATTGAAACAAGGG
AAGTCGATGGCCCTTGTCTCCGATGCGGGAACACCGGGTGTGTCGGACCCGGGAAGCCAAATGGTTCGCACCGCAAGAGA
GAATGGCATCTCCATTGTCCCAGTGCCCGGAGCTTCCGCTCTCACCGCTCTCCTTTCTGTTTCTGGATTCCAAGTGAACC
CCACGTATTTTTTAGGATTTCTCTCTGAAAAACCGAGTAAAAAACGCCGAGAATTAGAGAGAGCAAGGGAAATCGAAGGA
CTCATCGTGTTTTATGAATCCGTCCACAAACTCCCCAGGTTGTATCCAATCTTAGAGGAATTGTTTCCGGAAACAGAAGT
GTTAATGGGAAGGGAGTTGACAAAGGCCTTCGAAGAGGTAGTTTATTACGCAAATCCTAGGGAATTGGCGAATAATCCTC
CCAATGCCAAGGGTGAATTTGTATTTCTCTTGAATCATCGAAAAAAATCACTTAAGGGAAATTCAGATTCCACCGATATG
TGA

Upstream 100 bases:

>100_bases
GCCTGTGCCTTAGGGACGGCCTGTAACCCTTGTACAAAGGGAAATAATGAATTAGGTTGCACCTGTCCTGCGGGACAAAC
CCCACCTGGGTGCCAATCCG

Downstream 100 bases:

>100_bases
TGTAGGAAGAGGACTAGAATATGAATATCGATAAAGTAGGTCGTGTTGGTGGATACGGTTATGAACCAAAAAAACCACAA
GGACCAAAAGAATCAGAATC

Product: putative methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAYKREKGLLYVVATPIGNMGDITLRAIDVLKEVDLVLCESAKETKSLFHKLGISTPVLALYKDHSETPFANVLEQLKQG
KSMALVSDAGTPGVSDPGSQMVRTARENGISIVPVPGASALTALLSVSGFQVNPTYFLGFLSEKPSKKRRELERAREIEG
LIVFYESVHKLPRLYPILEELFPETEVLMGRELTKAFEEVVYYANPRELANNPPNAKGEFVFLLNHRKKSLKGNSDSTDM

Sequences:

>Translated_240_residues
MAYKREKGLLYVVATPIGNMGDITLRAIDVLKEVDLVLCESAKETKSLFHKLGISTPVLALYKDHSETPFANVLEQLKQG
KSMALVSDAGTPGVSDPGSQMVRTARENGISIVPVPGASALTALLSVSGFQVNPTYFLGFLSEKPSKKRRELERAREIEG
LIVFYESVHKLPRLYPILEELFPETEVLMGRELTKAFEEVVYYANPRELANNPPNAKGEFVFLLNHRKKSLKGNSDSTDM
>Mature_239_residues
AYKREKGLLYVVATPIGNMGDITLRAIDVLKEVDLVLCESAKETKSLFHKLGISTPVLALYKDHSETPFANVLEQLKQGK
SMALVSDAGTPGVSDPGSQMVRTARENGISIVPVPGASALTALLSVSGFQVNPTYFLGFLSEKPSKKRRELERAREIEGL
IVFYESVHKLPRLYPILEELFPETEVLMGRELTKAFEEVVYYANPRELANNPPNAKGEFVFLLNHRKKSLKGNSDSTDM

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=197, Percent_Identity=44.1624365482233, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_LEPBP (B0SPB4)

Other databases:

- EMBL:   CP000786
- RefSeq:   YP_001838714.1
- ProteinModelPortal:   B0SPB4
- GeneID:   6221170
- GenomeReviews:   CP000786_GR
- KEGG:   lbi:LEPBI_I1328
- HOGENOM:   HBG529058
- OMA:   GREMTKI
- ProtClustDB:   CLSK574685
- BioCyc:   LBIF456481:LEPBI_I1328-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 26585; Mature: 26454

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKREKGLLYVVATPIGNMGDITLRAIDVLKEVDLVLCESAKETKSLFHKLGISTPVLA
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEH
LYKDHSETPFANVLEQLKQGKSMALVSDAGTPGVSDPGSQMVRTARENGISIVPVPGASA
EECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHH
LTALLSVSGFQVNPTYFLGFLSEKPSKKRRELERAREIEGLIVFYESVHKLPRLYPILEE
HHHHHHHCCCEECHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPETEVLMGRELTKAFEEVVYYANPRELANNPPNAKGEFVFLLNHRKKSLKGNSDSTDM
HCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCC
>Mature Secondary Structure 
AYKREKGLLYVVATPIGNMGDITLRAIDVLKEVDLVLCESAKETKSLFHKLGISTPVLA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEH
LYKDHSETPFANVLEQLKQGKSMALVSDAGTPGVSDPGSQMVRTARENGISIVPVPGASA
EECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHH
LTALLSVSGFQVNPTYFLGFLSEKPSKKRRELERAREIEGLIVFYESVHKLPRLYPILEE
HHHHHHHCCCEECHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPETEVLMGRELTKAFEEVVYYANPRELANNPPNAKGEFVFLLNHRKKSLKGNSDSTDM
HCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA