| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220674
Identifier: 183220674
GI number: 183220674
Start: 1338269
End: 1339957
Strand: Reverse
Name: 183220674
Synonym: LEPBI_I1284
Alternate gene names: NA
Gene position: 1339957-1338269 (Counterclockwise)
Preceding gene: 183220675
Following gene: 183220673
Centisome position: 37.22
GC content: 37.12
Gene sequence:
>1689_bases GTGGAAGAAAAAGAAAAAAAAGAAATTTTATCTAAAATCCAATCCATGGAGAAAGAACTTTTTTTCTTAAAAGAAAAAGT CCTTTCATTTGGAGAATCAAAGGCCACTTCTTCTAGTGTCACACTTGGTTTACCAAAACAAACACCCGTTATAGAAGAAA AAGATACGGTATCATTAGAAGAAGGTCCCAATTGGTTCATCCAATGGATAGGCCAAAATCTATTTGTCAAACTAGGTGTG TTTTCACTCATCCTTGCTTCCGTTTGGTTTTTCTATTTGGCCATTGAAGAGTATTGGATCAATGAATCCGTGCGCATTTG GATCGGAATTATATCTTCCCTACCCATTTTATGGTATGGTCATAAAACAAAAGAAACTCGTCCCTACCTTTCCCCGAGTT TACTTGGTCTCGGAATCGCGGTTCTATTTTCAGCCTATTATTCCGGTTATGTTTGGTATGATTTGTATGGCACAGAAACC TGTTTTGTGGGTCTCATCCTGCTTAGCCTAACTGCTGTTGGATTGTCCTACTCGGAAAAAAGTGAAGTGTTATTTGGATT TGCGAGTTTAGGAGTGTTCCTTGCTCCCATTTTAGTTTCCACTGGCCAAAACTCTTATCCATTTTTATTCACGTATCTAC TCATTTGGAATGCATTATTTTTTTGGATCCGAAAGGAAATGCCTTGGAAGGCTGTTCCCCTCATCATCCTATTGGCAAAC CATCTCATTTTTGCCGCATGGGCAGATGGGAATTTAAATGAAGCCAAGGTATTTTTCCCATTGGTGTTTCAGATAGGCGT GTATCTCCTCTTTTTGATTCGTGAATTCCAAATCTTAAAAAACACAATCGAAGAAAACCCCATCCTAACACTCGTAAGCA TTGGTTTTACATTAGGACTTGGATTTTTACAGGCGTTTTGGATTTTTGGAATCTTTTACCCCACACTCAAACCATTTTTA CTCACCTTAGTTCTGATTGTTTTTTATGCCATCTACCAAAGATCAATTGAAGACAACTCACTCACCACTAACAAAAAGAA ACTCTACGATATCATAGGCCTATTTGGTTTACCACTGATCATCAGTGTGATCGTAATGGGACTGACTGGAAAAACGTTAG CATTTAGCCTCATTAGTTTTGCTTTTGTTGTGACAATGGCTGCCACCTATTCCAAACAACTCTATATGTATTTGGCAACC TTTCCTGTTTGGTTTTTTGCCTTGTTTTATATTTTTGCATTCACCTATCGTTCGTTTAATGAAATCCCTTTTCTCAACGG AAGGTTTTTTATCTTTTTTACAGGAAGTTTGTATCTTCTACTTTCCTATTTTTATAGCAGAAAGTTTTCACCTTTTTCCA AATTCTTTTTATATTCTGCCTATCCTTACTTTTTGTTAGGAAACTTTGTGGAAATTTATTTAGGATTTGCTCCCGAAAAA AGACTCTTTTTATACTCCATTAGTTTGATCTTCTATGGACTCATCACTCTAGTCTTTGGATTCCAAAAACAGATCCAATC CTTAAAAGTGGCGGGATTTGTTTCCCTGGCACTTGTTGTCGCCAAATTCTATTTGTACGATTTTTGGAACCTATCCCTTG GATACCGCATCCTAGCGGGTTTGTTTTTAGGAATCACACTCATCGTTACAGGAACATTTTACAATCGAATCAAAAAGGAA ACCACATGA
Upstream 100 bases:
>100_bases CCCGATTTACTCATCGAACTCATCCGTGAAAATGGAATGTGGAACGATCCAGCATAAAAAATAGTATCCATTCGATTCTT CTATCTGTAATCTCATCCAG
Downstream 100 bases:
>100_bases ACCAATTTTACTCCTTCACTTTTATCGTGATTCTATTTTCTCAGTCGACGGTTTTTGCAAGACCACTTCCAGTCGAAAAC TTTAAGTATAAAAAAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MEEKEKKEILSKIQSMEKELFFLKEKVLSFGESKATSSSVTLGLPKQTPVIEEKDTVSLEEGPNWFIQWIGQNLFVKLGV FSLILASVWFFYLAIEEYWINESVRIWIGIISSLPILWYGHKTKETRPYLSPSLLGLGIAVLFSAYYSGYVWYDLYGTET CFVGLILLSLTAVGLSYSEKSEVLFGFASLGVFLAPILVSTGQNSYPFLFTYLLIWNALFFWIRKEMPWKAVPLIILLAN HLIFAAWADGNLNEAKVFFPLVFQIGVYLLFLIREFQILKNTIEENPILTLVSIGFTLGLGFLQAFWIFGIFYPTLKPFL LTLVLIVFYAIYQRSIEDNSLTTNKKKLYDIIGLFGLPLIISVIVMGLTGKTLAFSLISFAFVVTMAATYSKQLYMYLAT FPVWFFALFYIFAFTYRSFNEIPFLNGRFFIFFTGSLYLLLSYFYSRKFSPFSKFFLYSAYPYFLLGNFVEIYLGFAPEK RLFLYSISLIFYGLITLVFGFQKQIQSLKVAGFVSLALVVAKFYLYDFWNLSLGYRILAGLFLGITLIVTGTFYNRIKKE TT
Sequences:
>Translated_562_residues MEEKEKKEILSKIQSMEKELFFLKEKVLSFGESKATSSSVTLGLPKQTPVIEEKDTVSLEEGPNWFIQWIGQNLFVKLGV FSLILASVWFFYLAIEEYWINESVRIWIGIISSLPILWYGHKTKETRPYLSPSLLGLGIAVLFSAYYSGYVWYDLYGTET CFVGLILLSLTAVGLSYSEKSEVLFGFASLGVFLAPILVSTGQNSYPFLFTYLLIWNALFFWIRKEMPWKAVPLIILLAN HLIFAAWADGNLNEAKVFFPLVFQIGVYLLFLIREFQILKNTIEENPILTLVSIGFTLGLGFLQAFWIFGIFYPTLKPFL LTLVLIVFYAIYQRSIEDNSLTTNKKKLYDIIGLFGLPLIISVIVMGLTGKTLAFSLISFAFVVTMAATYSKQLYMYLAT FPVWFFALFYIFAFTYRSFNEIPFLNGRFFIFFTGSLYLLLSYFYSRKFSPFSKFFLYSAYPYFLLGNFVEIYLGFAPEK RLFLYSISLIFYGLITLVFGFQKQIQSLKVAGFVSLALVVAKFYLYDFWNLSLGYRILAGLFLGITLIVTGTFYNRIKKE TT >Mature_562_residues MEEKEKKEILSKIQSMEKELFFLKEKVLSFGESKATSSSVTLGLPKQTPVIEEKDTVSLEEGPNWFIQWIGQNLFVKLGV FSLILASVWFFYLAIEEYWINESVRIWIGIISSLPILWYGHKTKETRPYLSPSLLGLGIAVLFSAYYSGYVWYDLYGTET CFVGLILLSLTAVGLSYSEKSEVLFGFASLGVFLAPILVSTGQNSYPFLFTYLLIWNALFFWIRKEMPWKAVPLIILLAN HLIFAAWADGNLNEAKVFFPLVFQIGVYLLFLIREFQILKNTIEENPILTLVSIGFTLGLGFLQAFWIFGIFYPTLKPFL LTLVLIVFYAIYQRSIEDNSLTTNKKKLYDIIGLFGLPLIISVIVMGLTGKTLAFSLISFAFVVTMAATYSKQLYMYLAT FPVWFFALFYIFAFTYRSFNEIPFLNGRFFIFFTGSLYLLLSYFYSRKFSPFSKFFLYSAYPYFLLGNFVEIYLGFAPEK RLFLYSISLIFYGLITLVFGFQKQIQSLKVAGFVSLALVVAKFYLYDFWNLSLGYRILAGLFLGITLIVTGTFYNRIKKE TT
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64684; Mature: 64684
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKEKKEILSKIQSMEKELFFLKEKVLSFGESKATSSSVTLGLPKQTPVIEEKDTVSLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEECC EGPNWFIQWIGQNLFVKLGVFSLILASVWFFYLAIEEYWINESVRIWIGIISSLPILWYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEC HKTKETRPYLSPSLLGLGIAVLFSAYYSGYVWYDLYGTETCFVGLILLSLTAVGLSYSEK CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC SEVLFGFASLGVFLAPILVSTGQNSYPFLFTYLLIWNALFFWIRKEMPWKAVPLIILLAN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HLIFAAWADGNLNEAKVFFPLVFQIGVYLLFLIREFQILKNTIEENPILTLVSIGFTLGL HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH GFLQAFWIFGIFYPTLKPFLLTLVLIVFYAIYQRSIEDNSLTTNKKKLYDIIGLFGLPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ISVIVMGLTGKTLAFSLISFAFVVTMAATYSKQLYMYLATFPVWFFALFYIFAFTYRSFN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EIPFLNGRFFIFFTGSLYLLLSYFYSRKFSPFSKFFLYSAYPYFLLGNFVEIYLGFAPEK CCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC RLFLYSISLIFYGLITLVFGFQKQIQSLKVAGFVSLALVVAKFYLYDFWNLSLGYRILAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGITLIVTGTFYNRIKKETT HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEEKEKKEILSKIQSMEKELFFLKEKVLSFGESKATSSSVTLGLPKQTPVIEEKDTVSLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEECC EGPNWFIQWIGQNLFVKLGVFSLILASVWFFYLAIEEYWINESVRIWIGIISSLPILWYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEC HKTKETRPYLSPSLLGLGIAVLFSAYYSGYVWYDLYGTETCFVGLILLSLTAVGLSYSEK CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCC SEVLFGFASLGVFLAPILVSTGQNSYPFLFTYLLIWNALFFWIRKEMPWKAVPLIILLAN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HLIFAAWADGNLNEAKVFFPLVFQIGVYLLFLIREFQILKNTIEENPILTLVSIGFTLGL HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH GFLQAFWIFGIFYPTLKPFLLTLVLIVFYAIYQRSIEDNSLTTNKKKLYDIIGLFGLPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ISVIVMGLTGKTLAFSLISFAFVVTMAATYSKQLYMYLATFPVWFFALFYIFAFTYRSFN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EIPFLNGRFFIFFTGSLYLLLSYFYSRKFSPFSKFFLYSAYPYFLLGNFVEIYLGFAPEK CCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC RLFLYSISLIFYGLITLVFGFQKQIQSLKVAGFVSLALVVAKFYLYDFWNLSLGYRILAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLGITLIVTGTFYNRIKKETT HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA