| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220662
Identifier: 183220662
GI number: 183220662
Start: 1316925
End: 1318082
Strand: Reverse
Name: 183220662
Synonym: LEPBI_I1271
Alternate gene names: NA
Gene position: 1318082-1316925 (Counterclockwise)
Preceding gene: 183220672
Following gene: 183220659
Centisome position: 36.62
GC content: 38.6
Gene sequence:
>1158_bases ATGGAAACAGTAGAAAGAAACAAACGTTCCTTGGATGTTTTTTCCGACACGGAAAAAAAACTGCATGTTTTGACCAAATT TTTATTAAACCAGGAATTGAACCTGAAGGATGATATCCATTCAGGAGAAAGTTGTTATCTCAAAAAAGTTTCCCAAGACG GAAACAAAATTTTAGTCAGTGTGAGACCCACCATCACACTTTCGGTCGGCCAAAAAATCACTCTCTACAAAATCCTTGGT CGTTACCTCCACCTGGAATGCACTGTGGAACAAGAAAAGGGCGAATCACAATACGTCTTACAATTGAATAAAATTGCCAT TGCCAAAAAAGACAGGGAAAGTTCGAGAATCCCAGTCCCTCCCGGTTCTGCCTGGATCACCAATGTGGTTTCAAGCAAAG CAAAAATTGAAACGGATATGTTCCATGTCCCTACTGCAGTGAAAGTTAACTTCCAAGATTTTGAAACCAAATTGAAAAAC TCAGTGGATTTTATTAAAATTTCCACCTTCAATTCCCGCGAAGACAATGAAGTGATCCGCCAAATTAAAAAAACCAAAAA AGGATTACTTTTGGAGGATGTGAACAACAAAGAATGTTATGTAACATCACCTAACGAGGACTTTTTGGTCTTTGCAGATG AAATTGAAGAAGACATTGCAAAGGAAATCAATAACCGAAGAAATCTCAAAATCAAATCGGAACTCATCCTCCCTATTTTG TATTTAAATGATGAGGAAGAATCGATTCCCATCGGTTACATCCACATGCAAAGTAAATCCGAAAATTTTGATCTCTTGAA AGCCATGGAGATGAAAACATTATGTTTTGAAATGGTGGACCGAATCCGCCACTCCAATATGATTAAGTCGGATGGAAAAT TTCCGGTGATCGATATTTCGGAAGGTGGACTCAAAGTCATCGTGGACCACCCCGATCTCATCCAAAGCCTACCCAAACTC AAAGGTTTTCAGTTTGATATCTTTTTTAAGATGCAGTCACCCTTAACTGCGTTTGGACAAATCAAAACCATAACCAAAAA TGAAGAAGGCCACCTAACAGTAGGTCTAGCGATTGCGGGCCACTCTTCCCGTTCTGGTGAGAAAAAAAGATTTCTCGAAA ACGTAGAATTCTTTCGAAAACAGCTTCAAAAAAATTAA
Upstream 100 bases:
>100_bases CATAATTATCCTTCCTTTTTCTACTTTAGGTAAGAAAACTCTGCGTGCAAGAGAATTTCAGGAGAAAATTGACCGATAAT AGTGAGTACCACGACCTTTT
Downstream 100 bases:
>100_bases ACGGCCGTTTCGCTTTAAATTTCCCCGTATCCTAATACTTCGATCGACCATCGTTCTTCCCATTTTCGGGACACAAAGTT AATGGTCTCGGGATCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues METVERNKRSLDVFSDTEKKLHVLTKFLLNQELNLKDDIHSGESCYLKKVSQDGNKILVSVRPTITLSVGQKITLYKILG RYLHLECTVEQEKGESQYVLQLNKIAIAKKDRESSRIPVPPGSAWITNVVSSKAKIETDMFHVPTAVKVNFQDFETKLKN SVDFIKISTFNSREDNEVIRQIKKTKKGLLLEDVNNKECYVTSPNEDFLVFADEIEEDIAKEINNRRNLKIKSELILPIL YLNDEEESIPIGYIHMQSKSENFDLLKAMEMKTLCFEMVDRIRHSNMIKSDGKFPVIDISEGGLKVIVDHPDLIQSLPKL KGFQFDIFFKMQSPLTAFGQIKTITKNEEGHLTVGLAIAGHSSRSGEKKRFLENVEFFRKQLQKN
Sequences:
>Translated_385_residues METVERNKRSLDVFSDTEKKLHVLTKFLLNQELNLKDDIHSGESCYLKKVSQDGNKILVSVRPTITLSVGQKITLYKILG RYLHLECTVEQEKGESQYVLQLNKIAIAKKDRESSRIPVPPGSAWITNVVSSKAKIETDMFHVPTAVKVNFQDFETKLKN SVDFIKISTFNSREDNEVIRQIKKTKKGLLLEDVNNKECYVTSPNEDFLVFADEIEEDIAKEINNRRNLKIKSELILPIL YLNDEEESIPIGYIHMQSKSENFDLLKAMEMKTLCFEMVDRIRHSNMIKSDGKFPVIDISEGGLKVIVDHPDLIQSLPKL KGFQFDIFFKMQSPLTAFGQIKTITKNEEGHLTVGLAIAGHSSRSGEKKRFLENVEFFRKQLQKN >Mature_385_residues METVERNKRSLDVFSDTEKKLHVLTKFLLNQELNLKDDIHSGESCYLKKVSQDGNKILVSVRPTITLSVGQKITLYKILG RYLHLECTVEQEKGESQYVLQLNKIAIAKKDRESSRIPVPPGSAWITNVVSSKAKIETDMFHVPTAVKVNFQDFETKLKN SVDFIKISTFNSREDNEVIRQIKKTKKGLLLEDVNNKECYVTSPNEDFLVFADEIEEDIAKEINNRRNLKIKSELILPIL YLNDEEESIPIGYIHMQSKSENFDLLKAMEMKTLCFEMVDRIRHSNMIKSDGKFPVIDISEGGLKVIVDHPDLIQSLPKL KGFQFDIFFKMQSPLTAFGQIKTITKNEEGHLTVGLAIAGHSSRSGEKKRFLENVEFFRKQLQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44171; Mature: 44171
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVERNKRSLDVFSDTEKKLHVLTKFLLNQELNLKDDIHSGESCYLKKVSQDGNKILVS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCEEEEE VRPTITLSVGQKITLYKILGRYLHLECTVEQEKGESQYVLQLNKIAIAKKDRESSRIPVP ECCEEEEECCCEEHHHHHHHHHEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCC PGSAWITNVVSSKAKIETDMFHVPTAVKVNFQDFETKLKNSVDFIKISTFNSREDNEVIR CCHHHHHHHHHCCHHCCCCEEECCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHH QIKKTKKGLLLEDVNNKECYVTSPNEDFLVFADEIEEDIAKEINNRRNLKIKSELILPIL HHHHHHCCCEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEEE YLNDEEESIPIGYIHMQSKSENFDLLKAMEMKTLCFEMVDRIRHSNMIKSDGKFPVIDIS EECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC EGGLKVIVDHPDLIQSLPKLKGFQFDIFFKMQSPLTAFGQIKTITKNEEGHLTVGLAIAG CCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEEEEEECCCCCEEEEEEEEC HSSRSGEKKRFLENVEFFRKQLQKN CCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METVERNKRSLDVFSDTEKKLHVLTKFLLNQELNLKDDIHSGESCYLKKVSQDGNKILVS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCEEEEE VRPTITLSVGQKITLYKILGRYLHLECTVEQEKGESQYVLQLNKIAIAKKDRESSRIPVP ECCEEEEECCCEEHHHHHHHHHEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCC PGSAWITNVVSSKAKIETDMFHVPTAVKVNFQDFETKLKNSVDFIKISTFNSREDNEVIR CCHHHHHHHHHCCHHCCCCEEECCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHH QIKKTKKGLLLEDVNNKECYVTSPNEDFLVFADEIEEDIAKEINNRRNLKIKSELILPIL HHHHHHCCCEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEEEEEE YLNDEEESIPIGYIHMQSKSENFDLLKAMEMKTLCFEMVDRIRHSNMIKSDGKFPVIDIS EECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC EGGLKVIVDHPDLIQSLPKLKGFQFDIFFKMQSPLTAFGQIKTITKNEEGHLTVGLAIAG CCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCHHHEEEEEEECCCCCEEEEEEEEC HSSRSGEKKRFLENVEFFRKQLQKN CCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA