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The map label for this gene is yegE [H]

Identifier: 183220613

GI number: 183220613

Start: 1270080

End: 1271126

Strand: Reverse

Name: yegE [H]

Synonym: LEPBI_I1219

Alternate gene names: 183220613

Gene position: 1271126-1270080 (Counterclockwise)

Preceding gene: 183220616

Following gene: 183220612

Centisome position: 35.31

GC content: 32.76

Gene sequence:

>1047_bases
ATGAATCAAATTAAATATTTGGATAATGCAATGAATCAATTACCTACAGAAATCTTTGATTCGTTACCAGTCGCGTTATT
TAGAATTTCCACAGATGGAATTGTCAAATTTATCAATTTAGAAGGCCAAAAATTACTAGGTATAACCAATTCAGATCTAG
TGATGAAACCAATTGAATTAATTCTAGATAAAAACTCAAAAGAGATTTTTTATGATTTTTTAAATCGCTTAAAATTTGAA
CGACAAACTCAACCCTGTTTGATAGATGTATGCACAAGCAAAGATTCTATTAAAAAATTGTCACTGTATGGAAAATATTT
GATTCATGAAGAAAACATTCAGCTTATCGCTATCGAATCTTCAACCGATACAGAATCAAATTATTCTTACAAAAAAGAAT
TTGAAGACATCTCTAATGTAGCCCAAGTGGGTCGATGGGAATTAGATCTTATCACCGAAAAATTAAATTGGTCTAATAAA
ATTTATGAAATTTTCGAATTGAATCCAGCAGATTTTCAACCTAGTTATGAGACGTTTTTAGCAGTCATACACCCTGAAGA
TCGTATACATGTAAATCAAGCATACTCGAAGTCCCTTATAGACAAACAAGAATATGAAATCGAACATCGACTTATCATGG
GAGACGGACGCATAAAGTGGGTCAGAGAAACATGTTATTCGATTTTTGATCCATTCGAACAACCTATAAAATCCATCGGT
ACATGCCAAGAAATCACCAAACAAAAAGAGTTGGAAATTCATCTCCAAGAGAGTGAAAAAAATTATTCAAATCTGGTGGA
AAATACAGCAAGCTTAGTCTGGAGCTTAGATGAGTACGGACATTTTAATTTTCTAAATCCAGCATGGGAAAAATCACTTG
GATACTCAAAAGAGGAAATGGTGAATCGACCTTTTTCCGATTTTCAACCTAGCGATATTTCCATTCGTGATCAAAAAGCT
TTCAGAAAGTTCAGCTTAGATGGTGAAATCGCGAAAATGGGATACGAAACATCGTTTCTCGCAAAAAATGGAGATAGAAA
ATATTAA

Upstream 100 bases:

>100_bases
AAAATTAATCGCTAAATTCTAATTTCTACTAGCATTTTTATCCAGGAATAATATCAATTGGTTTCGAAATTTATAATATA
ACGACAATATTTAAATCAAA

Downstream 100 bases:

>100_bases
ATTTTTTACCCAACGCCCATCTTTAATGAGAAAGGGGATTGTATAGGTTCCCATGGTACTGCCAACGATTTTACTTTCAA
ACGTACCTTGGATAATAAAC

Product: putative sensory transduction histidine kinase

Products: NA

Alternate protein names: DGC [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MNQIKYLDNAMNQLPTEIFDSLPVALFRISTDGIVKFINLEGQKLLGITNSDLVMKPIELILDKNSKEIFYDFLNRLKFE
RQTQPCLIDVCTSKDSIKKLSLYGKYLIHEENIQLIAIESSTDTESNYSYKKEFEDISNVAQVGRWELDLITEKLNWSNK
IYEIFELNPADFQPSYETFLAVIHPEDRIHVNQAYSKSLIDKQEYEIEHRLIMGDGRIKWVRETCYSIFDPFEQPIKSIG
TCQEITKQKELEIHLQESEKNYSNLVENTASLVWSLDEYGHFNFLNPAWEKSLGYSKEEMVNRPFSDFQPSDISIRDQKA
FRKFSLDGEIAKMGYETSFLAKNGDRKY

Sequences:

>Translated_348_residues
MNQIKYLDNAMNQLPTEIFDSLPVALFRISTDGIVKFINLEGQKLLGITNSDLVMKPIELILDKNSKEIFYDFLNRLKFE
RQTQPCLIDVCTSKDSIKKLSLYGKYLIHEENIQLIAIESSTDTESNYSYKKEFEDISNVAQVGRWELDLITEKLNWSNK
IYEIFELNPADFQPSYETFLAVIHPEDRIHVNQAYSKSLIDKQEYEIEHRLIMGDGRIKWVRETCYSIFDPFEQPIKSIG
TCQEITKQKELEIHLQESEKNYSNLVENTASLVWSLDEYGHFNFLNPAWEKSLGYSKEEMVNRPFSDFQPSDISIRDQKA
FRKFSLDGEIAKMGYETSFLAKNGDRKY
>Mature_348_residues
MNQIKYLDNAMNQLPTEIFDSLPVALFRISTDGIVKFINLEGQKLLGITNSDLVMKPIELILDKNSKEIFYDFLNRLKFE
RQTQPCLIDVCTSKDSIKKLSLYGKYLIHEENIQLIAIESSTDTESNYSYKKEFEDISNVAQVGRWELDLITEKLNWSNK
IYEIFELNPADFQPSYETFLAVIHPEDRIHVNQAYSKSLIDKQEYEIEHRLIMGDGRIKWVRETCYSIFDPFEQPIKSIG
TCQEITKQKELEIHLQESEKNYSNLVENTASLVWSLDEYGHFNFLNPAWEKSLGYSKEEMVNRPFSDFQPSDISIRDQKA
FRKFSLDGEIAKMGYETSFLAKNGDRKY

Specific function: Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=164, Percent_Identity=25.609756097561, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF05231 MASE1; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: =2.7.7.65 [H]

Molecular weight: Translated: 40698; Mature: 40698

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIKYLDNAMNQLPTEIFDSLPVALFRISTDGIVKFINLEGQKLLGITNSDLVMKPIEL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHH
ILDKNSKEIFYDFLNRLKFERQTQPCLIDVCTSKDSIKKLSLYGKYLIHEENIQLIAIES
HHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEEEEECCEEEEEEEC
STDTESNYSYKKEFEDISNVAQVGRWELDLITEKLNWSNKIYEIFELNPADFQPSYETFL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHEE
AVIHPEDRIHVNQAYSKSLIDKQEYEIEHRLIMGDGRIKWVRETCYSIFDPFEQPIKSIG
EEECCCCCEEHHHHHHHHHCCHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TCQEITKQKELEIHLQESEKNYSNLVENTASLVWSLDEYGHFNFLNPAWEKSLGYSKEEM
HHHHHHCCHHEEEEEEHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCHHHHHHCCCCHHHH
VNRPFSDFQPSDISIRDQKAFRKFSLDGEIAKMGYETSFLAKNGDRKY
HCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MNQIKYLDNAMNQLPTEIFDSLPVALFRISTDGIVKFINLEGQKLLGITNSDLVMKPIEL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHH
ILDKNSKEIFYDFLNRLKFERQTQPCLIDVCTSKDSIKKLSLYGKYLIHEENIQLIAIES
HHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHEEEEECCEEEEEEEC
STDTESNYSYKKEFEDISNVAQVGRWELDLITEKLNWSNKIYEIFELNPADFQPSYETFL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHEE
AVIHPEDRIHVNQAYSKSLIDKQEYEIEHRLIMGDGRIKWVRETCYSIFDPFEQPIKSIG
EEECCCCCEEHHHHHHHHHCCHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TCQEITKQKELEIHLQESEKNYSNLVENTASLVWSLDEYGHFNFLNPAWEKSLGYSKEEM
HHHHHHCCHHEEEEEEHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCHHHHHHCCCCHHHH
VNRPFSDFQPSDISIRDQKAFRKFSLDGEIAKMGYETSFLAKNGDRKY
HCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7984428 [H]