| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220458
Identifier: 183220458
GI number: 183220458
Start: 1094534
End: 1095409
Strand: Reverse
Name: 183220458
Synonym: LEPBI_I1055
Alternate gene names: NA
Gene position: 1095409-1094534 (Counterclockwise)
Preceding gene: 183220459
Following gene: 183220457
Centisome position: 30.43
GC content: 39.16
Gene sequence:
>876_bases TTGACACATGGACAAACACTTGTTAATTTTCTGGGAATGAAACGAAGGATTCTCTCGAAAAGAATATTACTCTCCATTTT AGCGATTTTGAATGTAATTTCTCCTTTATATTCACAAACACCCACACCAAGACTAGAGTATCCCATTGGATTTTACCAAG GTGGGTTTTATTTAAACCTCCAAGGGGGAGAAACCGTTTATACAGGCGGCAGTTTGCAAAAAAGAGAATCCTCTCTTCAA AATTCCATCAAAACACAAACCCAACTAGGTGTGATGCCAGTGCGTCTCCTCGGATCACTTTCTGTCCCACAAGTGATCCC CATTCCCGATGGCAAAGTGGAACCAGGAAGGACGGGTCGTGTATTTTTTGAATATGGTCTCACTGACCATTTAGGTATTT TGATTTCCTATGCTTCCAATTCCGTAAAAGGAGAAAGATCAGACCAATTCATTTACTCTGATAGGAACAGTGCGACAGGA TTCACTCCGTATTTGGAATATGCGCCCACCAAATATACAGTATATAAAGACAAAGTGTATGGACTTGGACTCAATTATCA TTTTTTAACCAAAAATAAATTTGATCCTTATATTGGACTCGAATTGGGACTCGTGAATTTTAGTGCCTCCTACAGGTCCA CAGGTTATACCAACCTCTATTTACAAAGCCTGATGGCGCAAGGGACGGGTGTGAGTGGAAGGGCCGCTCTAGGGATCAAC TACTACCTAACACCAGAATTTGGTTTTTCTTTTGAATTACATGGCATGAAACGAATGTTAAAGTCTAATTTATTTTCAAG TGAAACATTTGACCAAGTTGGATTCCAATTTGGTGTCATCTTCAATTTAGATAATATTAGCAAAGACCAAAGATGA
Upstream 100 bases:
>100_bases TGTCTGATTGTTTTGTGACAATCAAAAACCCTAAGGAAATTTTTGGGGTTTTTGATTCGATTTATCATCGCAAACATTTT TTATTTCCTACTCTTTTCCG
Downstream 100 bases:
>100_bases AAAAGAATTCGATTCTTTCCCGAATTTTGATTTTGGCAATTGTATTGTTTTTTTTCCAGGACTGCCGATTGGGAGCATTG TATCGAGAGGACAATTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTHGQTLVNFLGMKRRILSKRILLSILAILNVISPLYSQTPTPRLEYPIGFYQGGFYLNLQGGETVYTGGSLQKRESSLQ NSIKTQTQLGVMPVRLLGSLSVPQVIPIPDGKVEPGRTGRVFFEYGLTDHLGILISYASNSVKGERSDQFIYSDRNSATG FTPYLEYAPTKYTVYKDKVYGLGLNYHFLTKNKFDPYIGLELGLVNFSASYRSTGYTNLYLQSLMAQGTGVSGRAALGIN YYLTPEFGFSFELHGMKRMLKSNLFSSETFDQVGFQFGVIFNLDNISKDQR
Sequences:
>Translated_291_residues MTHGQTLVNFLGMKRRILSKRILLSILAILNVISPLYSQTPTPRLEYPIGFYQGGFYLNLQGGETVYTGGSLQKRESSLQ NSIKTQTQLGVMPVRLLGSLSVPQVIPIPDGKVEPGRTGRVFFEYGLTDHLGILISYASNSVKGERSDQFIYSDRNSATG FTPYLEYAPTKYTVYKDKVYGLGLNYHFLTKNKFDPYIGLELGLVNFSASYRSTGYTNLYLQSLMAQGTGVSGRAALGIN YYLTPEFGFSFELHGMKRMLKSNLFSSETFDQVGFQFGVIFNLDNISKDQR >Mature_290_residues THGQTLVNFLGMKRRILSKRILLSILAILNVISPLYSQTPTPRLEYPIGFYQGGFYLNLQGGETVYTGGSLQKRESSLQN SIKTQTQLGVMPVRLLGSLSVPQVIPIPDGKVEPGRTGRVFFEYGLTDHLGILISYASNSVKGERSDQFIYSDRNSATGF TPYLEYAPTKYTVYKDKVYGLGLNYHFLTKNKFDPYIGLELGLVNFSASYRSTGYTNLYLQSLMAQGTGVSGRAALGINY YLTPEFGFSFELHGMKRMLKSNLFSSETFDQVGFQFGVIFNLDNISKDQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32580; Mature: 32449
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHGQTLVNFLGMKRRILSKRILLSILAILNVISPLYSQTPTPRLEYPIGFYQGGFYLNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCEEEEE QGGETVYTGGSLQKRESSLQNSIKTQTQLGVMPVRLLGSLSVPQVIPIPDGKVEPGRTGR CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCE VFFEYGLTDHLGILISYASNSVKGERSDQFIYSDRNSATGFTPYLEYAPTKYTVYKDKVY EEEEECCCHHHHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCEEEEEECCEE GLGLNYHFLTKNKFDPYIGLELGLVNFSASYRSTGYTNLYLQSLMAQGTGVSGRAALGIN EECCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEE YYLTPEFGFSFELHGMKRMLKSNLFSSETFDQVGFQFGVIFNLDNISKDQR EEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCCCCC >Mature Secondary Structure THGQTLVNFLGMKRRILSKRILLSILAILNVISPLYSQTPTPRLEYPIGFYQGGFYLNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCEEEEE QGGETVYTGGSLQKRESSLQNSIKTQTQLGVMPVRLLGSLSVPQVIPIPDGKVEPGRTGR CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCCCE VFFEYGLTDHLGILISYASNSVKGERSDQFIYSDRNSATGFTPYLEYAPTKYTVYKDKVY EEEEECCCHHHHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCEEEEEECCEE GLGLNYHFLTKNKFDPYIGLELGLVNFSASYRSTGYTNLYLQSLMAQGTGVSGRAALGIN EECCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEE YYLTPEFGFSFELHGMKRMLKSNLFSSETFDQVGFQFGVIFNLDNISKDQR EEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA