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The map label for this gene is yrbE [C]

Identifier: 183220168

GI number: 183220168

Start: 773890

End: 775014

Strand: Direct

Name: yrbE [C]

Synonym: LEPBI_I0756

Alternate gene names: 183220168

Gene position: 773890-775014 (Clockwise)

Preceding gene: 183220161

Following gene: 183220169

Centisome position: 21.5

GC content: 40.27

Gene sequence:

>1125_bases
GTGGAATCTGACCAAAGACAATCTTCATTTTTGTGGGAAGGTAATACCTTAGAAATCCACTTACCTGAAATTTTTAATAC
AAAGGAAGTTTCTAAGGATTGGGTAATCTTTTTTGAACTCATCGGAAAAAACTCTCCAAGAAACATCATCATTTTCGCAA
ATCAATTAAAAGAAACAGACACTTCTGGTATTTCTTTTTTGAAATTAATCAGAACAGAATGTGAATCTAGAAACATTCAT
TTCGTCTTACGTGAGTTAAATGATAAGTTTCAATACCGTCTCAATATCACAAATGATGATAGCAAAAAATACAATGAACA
GTTGGCGGTCTCCCTTAGAAAATCCGAACAAATTGGAAAACTCACGATCGATTCCTTGTTGGAATTCAAATACCTAATCA
CGTTTACAGGCGAACTCACCGTTTCTTTCTGGCGTTCCTTTTTGCACCCTTCGAAAATCAGGTGGAAGGATAGTTTTAGA
GTCGCTGAGTCAATGGGCGTCAATGCCTTTCCCATTATTGCCATGATTGGATTTTTACTTGGCCTCATCATGTCCTTTCA
GTCTGCAATCCCTATGAGGCGATTTGGGGCTGAGATCTTTGTTGCCAATCTTGTAGGACTTTCTTTGTTTCGGGAACTTG
GTCCGCTCATGACGGCTTTCATTCTTTCCGGTAGGTCTGGATCTTCGTTTGCAGCGGAACTTGGAACCATGAAGGTTTCC
GAAGAAATTGATGCACTTACCACGATGGGACTACCTCCTGTACAATTTCTCATCATTCCGAGGCTTGTGGCTTCCCTCAT
TGTCACACCCCTTCTTACCATCGTATTCAATTTATTTGGTCTCATTGGTGGCGCCGTTGTCCTTGTCAGTTTTGGATTTC
CACTCATTACATTTGTGAACCAAGTGAACATTGCCGTGGGACTTTCCGATATATTAGGAGGACTTCTCAAATCTTATTTT
TTTGGAATGATCATCGCATCCATCGGTTGTTACCGAGGTTTAAAAACCGCTTCGGGAGCGGGTGCTGTGGGGGAATCAAC
AACTTCTGCCGTTGTTGGTTCCATTATCTTGGTTTCTATCTTAGATGGGATTTTTTCCGTCTTATTTTTTTATCTACGCA
TATGA

Upstream 100 bases:

>100_bases
TCACGTTTCCCATAAAATAGAAGGTTCTAAAGAATGCATCCAATTGTAAAATAAAATCACTTGCCTAACCTTCGTTCTGA
ATTAGTTTTACGTTTGAAAC

Downstream 100 bases:

>100_bases
AAGACAAACCGATCATTCGAGTCGAACACCTAACAACCGGATATGGTCACACTGTGATCATGGAAGATATATCCTTTGAA
GTAAACAAAGGAGAAATCTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MESDQRQSSFLWEGNTLEIHLPEIFNTKEVSKDWVIFFELIGKNSPRNIIIFANQLKETDTSGISFLKLIRTECESRNIH
FVLRELNDKFQYRLNITNDDSKKYNEQLAVSLRKSEQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIRWKDSFR
VAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVS
EEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNLFGLIGGAVVLVSFGFPLITFVNQVNIAVGLSDILGGLLKSYF
FGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI

Sequences:

>Translated_374_residues
MESDQRQSSFLWEGNTLEIHLPEIFNTKEVSKDWVIFFELIGKNSPRNIIIFANQLKETDTSGISFLKLIRTECESRNIH
FVLRELNDKFQYRLNITNDDSKKYNEQLAVSLRKSEQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIRWKDSFR
VAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVS
EEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNLFGLIGGAVVLVSFGFPLITFVNQVNIAVGLSDILGGLLKSYF
FGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI
>Mature_374_residues
MESDQRQSSFLWEGNTLEIHLPEIFNTKEVSKDWVIFFELIGKNSPRNIIIFANQLKETDTSGISFLKLIRTECESRNIH
FVLRELNDKFQYRLNITNDDSKKYNEQLAVSLRKSEQIGKLTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIRWKDSFR
VAESMGVNAFPIIAMIGFLLGLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVS
EEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNLFGLIGGAVVLVSFGFPLITFVNQVNIAVGLSDILGGLLKSYF
FGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSILDGIFSVLFFYLRI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=216, Percent_Identity=31.9444444444444, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41480; Mature: 41480

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESDQRQSSFLWEGNTLEIHLPEIFNTKEVSKDWVIFFELIGKNSPRNIIIFANQLKETD
CCCCCCCCCEEECCCEEEEECCCCCCCHHCCCHHEEHHHHHCCCCCCEEEEEECCCCCCC
TSGISFLKLIRTECESRNIHFVLRELNDKFQYRLNITNDDSKKYNEQLAVSLRKSEQIGK
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCH
LTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIRWKDSFRVAESMGVNAFPIIAMIGFLL
HHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNLFGLIGGAVVLVSFGFPLITFVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QVNIAVGLSDILGGLLKSYFFGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSI
HHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LDGIFSVLFFYLRI
HHHHHHHHHHHHCC
>Mature Secondary Structure
MESDQRQSSFLWEGNTLEIHLPEIFNTKEVSKDWVIFFELIGKNSPRNIIIFANQLKETD
CCCCCCCCCEEECCCEEEEECCCCCCCHHCCCHHEEHHHHHCCCCCCEEEEEECCCCCCC
TSGISFLKLIRTECESRNIHFVLRELNDKFQYRLNITNDDSKKYNEQLAVSLRKSEQIGK
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCH
LTIDSLLEFKYLITFTGELTVSFWRSFLHPSKIRWKDSFRVAESMGVNAFPIIAMIGFLL
HHHHHHHHHHHHEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GLIMSFQSAIPMRRFGAEIFVANLVGLSLFRELGPLMTAFILSGRSGSSFAAELGTMKVS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EEIDALTTMGLPPVQFLIIPRLVASLIVTPLLTIVFNLFGLIGGAVVLVSFGFPLITFVN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QVNIAVGLSDILGGLLKSYFFGMIIASIGCYRGLKTASGAGAVGESTTSAVVGSIILVSI
HHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LDGIFSVLFFYLRI
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA