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The map label for this gene is arnB [H]

Identifier: 183220108

GI number: 183220108

Start: 706732

End: 707826

Strand: Direct

Name: arnB [H]

Synonym: LEPBI_I0696

Alternate gene names: 183220108

Gene position: 706732-707826 (Clockwise)

Preceding gene: 183220104

Following gene: 183220109

Centisome position: 19.63

GC content: 37.81

Gene sequence:

>1095_bases
ATGAGCACCGAAACAATACAAAGACCGATTCGAAAAGAAAAAAACATCGAATTCTTCAAACCAACCCTTTCGAGAGAAGA
TCTGAAAGGTGTTTTAGAATGTCTCGTGGAAGAACATCTTTCCACAGGTGAAATCGTAGAACGATTTGAAAAAACGTTTT
GCCATACATTTAAAATTAAATACGCGATATCCTCTAATTCATTAACATCTGCTTATCACCTCGCATTACTTGCATTAGGT
GTAAAGGCTGGTGATTCTGTATTGTTATCTAGTTATGCACCTATCTCTGCTTTGGATGCCATTTTTTTAATCCAAGCAAA
ACCAGTGCTTATCGATTTAAAACGGAATTCTTTCCATCCATGCCCCGAAGAATTTTTACGCAAAAAAAATGAATCTGGTG
CCAAGTTTGCTTTGTTTGATCATAGTTTTGGTTCCCTCATTCGATTGAATGAGTATTCAATTGAAGGATTGGAGGTGTTA
GAAGATTTCACCGAAGCCATCGGTGCCACGTCTGAAAGTATCACAGTGGGAAAACAATCTAAAATTGCAATCTGTGGACT
CAGTGCTGAAAACATCATCACAACTGGAAATGGTGCGATGATCATCACTTCTGAAAGTAATCTTGCAAGTAACGTAAGAT
CGTATAAGTCTGGAACATCCGCCAAACGTAACTTTGGTGAACCAAAATATGATTATAATTTGGTGGATTACCAAGCAGCG
CTTGGGATCGAACAATTATCAAAACTTGGTGTGATTTTAGAACGTAAGAAAAAAATTGCATCGGCTTATTTACAAGCAGT
GCAAAACTCACGTCTGGAAACCTATTTCCAAAATCCAAACGAAGACACCTTCCAAAGATTTCCGATCGTTGTCTCTGGAC
AAAATTATGAAGAAATCCAAAGGTATTTTAAATCCATTCATATTGGAACGCAAAGAACAGTAGAAGAACCTCTGCACCGT
GTTTTGGAAGAAAACCATCTGGAGTATCCAAATGCGGAAAGGTTGTACCAAAGGGGTCATTGTATTCCGATTTATCCTAA
CTTAACAAAAGATAATGTACAGAGGATAGCAACTGCCATCCGACGTATCTATTGA

Upstream 100 bases:

>100_bases
TCCTTGGAAATTCTAAAATTATGTTCGCATTTCGAAAAATGAAGTGACATAATTCGTAAATGGGTTACTTAAGTGACATA
ATAAAGAGGAGTGCTGTTGG

Downstream 100 bases:

>100_bases
TTGGTGCCAAAGTTATACTATCTCGACTCATTATTTGAGTATCGCCTCCACTCTCCTCCACTAGGCCTCGATTCCTCTTT
AAAAAGGAGGAACCGATGTT

Product: DegT/DnrJ/EryC1/StrS family aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSTETIQRPIRKEKNIEFFKPTLSREDLKGVLECLVEEHLSTGEIVERFEKTFCHTFKIKYAISSNSLTSAYHLALLALG
VKAGDSVLLSSYAPISALDAIFLIQAKPVLIDLKRNSFHPCPEEFLRKKNESGAKFALFDHSFGSLIRLNEYSIEGLEVL
EDFTEAIGATSESITVGKQSKIAICGLSAENIITTGNGAMIITSESNLASNVRSYKSGTSAKRNFGEPKYDYNLVDYQAA
LGIEQLSKLGVILERKKKIASAYLQAVQNSRLETYFQNPNEDTFQRFPIVVSGQNYEEIQRYFKSIHIGTQRTVEEPLHR
VLEENHLEYPNAERLYQRGHCIPIYPNLTKDNVQRIATAIRRIY

Sequences:

>Translated_364_residues
MSTETIQRPIRKEKNIEFFKPTLSREDLKGVLECLVEEHLSTGEIVERFEKTFCHTFKIKYAISSNSLTSAYHLALLALG
VKAGDSVLLSSYAPISALDAIFLIQAKPVLIDLKRNSFHPCPEEFLRKKNESGAKFALFDHSFGSLIRLNEYSIEGLEVL
EDFTEAIGATSESITVGKQSKIAICGLSAENIITTGNGAMIITSESNLASNVRSYKSGTSAKRNFGEPKYDYNLVDYQAA
LGIEQLSKLGVILERKKKIASAYLQAVQNSRLETYFQNPNEDTFQRFPIVVSGQNYEEIQRYFKSIHIGTQRTVEEPLHR
VLEENHLEYPNAERLYQRGHCIPIYPNLTKDNVQRIATAIRRIY
>Mature_363_residues
STETIQRPIRKEKNIEFFKPTLSREDLKGVLECLVEEHLSTGEIVERFEKTFCHTFKIKYAISSNSLTSAYHLALLALGV
KAGDSVLLSSYAPISALDAIFLIQAKPVLIDLKRNSFHPCPEEFLRKKNESGAKFALFDHSFGSLIRLNEYSIEGLEVLE
DFTEAIGATSESITVGKQSKIAICGLSAENIITTGNGAMIITSESNLASNVRSYKSGTSAKRNFGEPKYDYNLVDYQAAL
GIEQLSKLGVILERKKKIASAYLQAVQNSRLETYFQNPNEDTFQRFPIVVSGQNYEEIQRYFKSIHIGTQRTVEEPLHRV
LEENHLEYPNAERLYQRGHCIPIYPNLTKDNVQRIATAIRRIY

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=375, Percent_Identity=26.6666666666667, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41142; Mature: 41011

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTETIQRPIRKEKNIEFFKPTLSREDLKGVLECLVEEHLSTGEIVERFEKTFCHTFKIK
CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE
YAISSNSLTSAYHLALLALGVKAGDSVLLSSYAPISALDAIFLIQAKPVLIDLKRNSFHP
EEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHEEECCCEEEEECCCCCCC
CPEEFLRKKNESGAKFALFDHSFGSLIRLNEYSIEGLEVLEDFTEAIGATSESITVGKQS
CHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCC
KIAICGLSAENIITTGNGAMIITSESNLASNVRSYKSGTSAKRNFGEPKYDYNLVDYQAA
EEEEEECCCCCEEEECCCEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHH
LGIEQLSKLGVILERKKKIASAYLQAVQNSRLETYFQNPNEDTFQRFPIVVSGQNYEEIQ
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHCCEEEECCCHHHHH
RYFKSIHIGTQRTVEEPLHRVLEENHLEYPNAERLYQRGHCIPIYPNLTKDNVQRIATAI
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHH
RRIY
HHCC
>Mature Secondary Structure 
STETIQRPIRKEKNIEFFKPTLSREDLKGVLECLVEEHLSTGEIVERFEKTFCHTFKIK
CCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE
YAISSNSLTSAYHLALLALGVKAGDSVLLSSYAPISALDAIFLIQAKPVLIDLKRNSFHP
EEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHEEECCCEEEEECCCCCCC
CPEEFLRKKNESGAKFALFDHSFGSLIRLNEYSIEGLEVLEDFTEAIGATSESITVGKQS
CHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCC
KIAICGLSAENIITTGNGAMIITSESNLASNVRSYKSGTSAKRNFGEPKYDYNLVDYQAA
EEEEEECCCCCEEEECCCEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHH
LGIEQLSKLGVILERKKKIASAYLQAVQNSRLETYFQNPNEDTFQRFPIVVSGQNYEEIQ
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHCCEEEECCCHHHHH
RYFKSIHIGTQRTVEEPLHRVLEENHLEYPNAERLYQRGHCIPIYPNLTKDNVQRIATAI
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHH
RRIY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA