| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220035
Identifier: 183220035
GI number: 183220035
Start: 624961
End: 625488
Strand: Direct
Name: 183220035
Synonym: LEPBI_I0621
Alternate gene names: NA
Gene position: 624961-625488 (Clockwise)
Preceding gene: 183220034
Following gene: 183220036
Centisome position: 17.36
GC content: 30.49
Gene sequence:
>528_bases ATGACCTATAAAATGATGCGTTTACTCTGTTGTTTGAGTCCTTTGTTTTTATTACTTCAATGTGCTGCTTTTCCGGATCC AGTGACTTCAAAGAATCGAAATTTGAAATTAAATAGTGAAAAAAAGGTAAATTTAATTTTTACAGGTTTTTATCGTTACG AAAAGGAGAAGGAGGAAATTATTGAAAACATTAAAAAACAAGGATTTTTTTATGATCAAACATCTCCTATCACCTTAGAA GTAATATTACAAAAAAAAGATATAAAATACCGATACCCTCTCATTCACAAACTTCATTTTTTACTTACTTTTTTATCAGG AGGAATCATTCCATCACATATTAGAACAGAACATACTCTAACATTCCGATATTCAAAATCTGAGATCATTTTGATGGAAA ATGAATATTCGATAGGTATGGATCAATGGCGTGGAATTCCTGTTATACTCCTCATGATTACACATTGGCCGAATCGTATT TACAAAGAACAATTAGTGGAAACAACACGATTGGAGTTTATTGAATGA
Upstream 100 bases:
>100_bases TTTGGTTGGGTTTCACTTTTATTCATGTGGGTAGATGATCGAAATGAATGGAATTCGATTCTTTCAGAGAAAGTATCGGA ATTTTTAGGAGATGCGAAAA
Downstream 100 bases:
>100_bases ACAAGTTTTATATATTTTTATTTTATTTTGTACTAAGTTTTTTTTCATGTATGGGTTTTTTTTATAAGTTAACACCAAAT CAAAAAAATGACTTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTYKMMRLLCCLSPLFLLLQCAAFPDPVTSKNRNLKLNSEKKVNLIFTGFYRYEKEKEEIIENIKKQGFFYDQTSPITLE VILQKKDIKYRYPLIHKLHFLLTFLSGGIIPSHIRTEHTLTFRYSKSEIILMENEYSIGMDQWRGIPVILLMITHWPNRI YKEQLVETTRLEFIE
Sequences:
>Translated_175_residues MTYKMMRLLCCLSPLFLLLQCAAFPDPVTSKNRNLKLNSEKKVNLIFTGFYRYEKEKEEIIENIKKQGFFYDQTSPITLE VILQKKDIKYRYPLIHKLHFLLTFLSGGIIPSHIRTEHTLTFRYSKSEIILMENEYSIGMDQWRGIPVILLMITHWPNRI YKEQLVETTRLEFIE >Mature_174_residues TYKMMRLLCCLSPLFLLLQCAAFPDPVTSKNRNLKLNSEKKVNLIFTGFYRYEKEKEEIIENIKKQGFFYDQTSPITLEV ILQKKDIKYRYPLIHKLHFLLTFLSGGIIPSHIRTEHTLTFRYSKSEIILMENEYSIGMDQWRGIPVILLMITHWPNRIY KEQLVETTRLEFIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20913; Mature: 20782
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKMMRLLCCLSPLFLLLQCAAFPDPVTSKNRNLKLNSEKKVNLIFTGFYRYEKEKEEI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHH IENIKKQGFFYDQTSPITLEVILQKKDIKYRYPLIHKLHFLLTFLSGGIIPSHIRTEHTL HHHHHHCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE TFRYSKSEIILMENEYSIGMDQWRGIPVILLMITHWPNRIYKEQLVETTRLEFIE EEEECCCEEEEEECCCCCCHHHHCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYKMMRLLCCLSPLFLLLQCAAFPDPVTSKNRNLKLNSEKKVNLIFTGFYRYEKEKEEI CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEHHHHHHHHHHH IENIKKQGFFYDQTSPITLEVILQKKDIKYRYPLIHKLHFLLTFLSGGIIPSHIRTEHTL HHHHHHCCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE TFRYSKSEIILMENEYSIGMDQWRGIPVILLMITHWPNRIYKEQLVETTRLEFIE EEEECCCEEEEEECCCCCCHHHHCCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA