| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219907
Identifier: 183219907
GI number: 183219907
Start: 483294
End: 485324
Strand: Direct
Name: 183219907
Synonym: LEPBI_I0489
Alternate gene names: NA
Gene position: 483294-485324 (Clockwise)
Preceding gene: 183219903
Following gene: 183219913
Centisome position: 13.43
GC content: 37.08
Gene sequence:
>2031_bases TTGGAGTCACTGAACTTAGGCAATCTGGTTTCAAAACGTAAGTTCCATTTGGCCATTGGATCTCTACTCATCCTGATCCA AACCTCCGTTTGGGGAGGAGAGGAAGACCGTAGGAATCCACTTTCTGGTTTGTATCTCTCTCCCTTGCAGGTGATTTCCA TCGAGGAAATCAAATCTCTCGATACAGAAAAACGCATCACAATCGATGAAGATTCAGGGATTGCGCTTCGTGACGAACCC AAACCTACAGACCCCAATGCTCCCGATGTACCGGTCGCGCCTGGTGCTGACCTCCCTGTTGATCCTGGCCAAGAAACGGG ACCAAAAAACATAGAAACTAAGATCCGTGAGGCGGAAGGACTCCTCAAACGATATTATAGCCAATTCATCGAAGAAAAGC GGATTTGGGAAGATCGCGAAAAGGGAAATGTTTATAATTCTCGTACCGAGATGAATGACATTCGATTATTACTTTGGCAA AGTACCCATAAACATTCGGAAACGTTTATTGTCCGAGATTCTCCTCTTCTCTATTACCTTCATACCAAACTTGCGAAACT ATATGTGGAAGCAGAAAAATTTGCTCCAGCACTCAGACATTACCTCGCTGCGTTTCGGTATCATCCTTTGGAGATGACAG AAGAAGGGTATCGTAATGGAGAGTGGCAAAAAGAAGATGTTCTTGGATATGATGAAAGTGCAGCAAAAGAACATGATAGA TTGTACAAGGAATGGATCCAAGCGGAACAAAAATGGAAAAAAGCTAAAGATGATATCCATCTCAAAGAAAGTGCTTGGGT CCGTGATGGGAAAAAACTCTCGGAATTGGCACCTCAATCAAAACTTTGGAATGACGAAGTGCGTATGTTAGATGAATCAA GAAAAAAAGCTAAATCAAATTATGATGAATCATATAATAAAAGATATTTGGCTTATTTAAATAAACGAAAACAAATTGAA TCGAATGAACTTTATGCTTTTGCCAATGTTGTCAAAAAACTGGAAGATGATAACAAAGAACGTTTAAAAATTGTCAATAA ACTCGGAACAGCAGGAAAAGGGATTTATGTTTTGTTCGATTATAAAAGAAATACTGATTTTTTTGCATATGAATTGATCC TTGAACGAGCCTATCGGATTTGGAATGAAAACCCAAATGTTCTGAGTGATATTGCCGAACAATTCCGTCAAGATGGGAAA AAAGAAAAGGCCGCAGATTTTTACGAAAAGGCACTTACTGAATACTTAAAAAATCAAAATCCATCAGATGATGAAAAAGA AAAAATCATCAAAGCTAATTTGCGTTTAGCAACGATTAATGCTGACTTAAAACGAAATATCCTAGCGGGAAATTATTACG AAACCTTCTTTCGATTGAGTCCAGATACTCCTGAAAAAACAAGGGTTTCTTATGAAATTGGAGTCTTTTTCAATCATAAG ATTGGTGATCCTGAAAGGGGTTCCAACTTTTTAGAGTATTGGTTGGATAAAAATAGTAAGGATTGGAATCCATCGCTTGC GGAGGACACAGGGGTTCCGGAAATGGAATCGATTGCATATTATTATCTCAGCAAAAAAGATAAAAAACAAAAAAAATATG AGTTAGAACAAAACAAACTGAATATCTCCCTCATGCAGTGGAAAAAAATTGATGAAAAACTCATCCTTGCAGAAAAAGAA AGACTAGATTTGATAGAAAAAAAACAATCTCTCAAAAAAGACTTAATGGTCACAACGCTTGATGATATTTTATCTCAATA CCGATTGATGGATTTAAAAATTGAAGACCAAGAAGCTGTGATTCGTGTTTTGGAAACTAAACGGAATAAAATCCCTCTCA TTAAAATTTTATTCCGACTTGGAGTACTATCCGAAGAAAATAGGGATTTTAAAAAAGCACAAGAATATTATGAAACGGTC ATCAAAGAAGGTGGCGAAACCGAAGTGCGAGTGGCATTAAAAGAATTAGAAAGGATTAAAAGGATTTTAGAAACAGGAAA TATTCAACCTCCCATCAACGAGAGTATTTAA
Upstream 100 bases:
>100_bases TTTGAATTGTAGTGAACGCCATTTGCCCAAAGAATACAACACCTTTTGTATTGGGAAAATTGAAATTTCGCCGATAATTG AGAATAGGTAGGAATGGAAT
Downstream 100 bases:
>100_bases TGATTTCGTCTGTTTGATCTCCAGCTAACTCCTGCTCAAGGTTTTCTCTCGTATAACCTTCATCAGGTAAAACACGAAAC TTTACCTCATCCACTGTATC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MESLNLGNLVSKRKFHLAIGSLLILIQTSVWGGEEDRRNPLSGLYLSPLQVISIEEIKSLDTEKRITIDEDSGIALRDEP KPTDPNAPDVPVAPGADLPVDPGQETGPKNIETKIREAEGLLKRYYSQFIEEKRIWEDREKGNVYNSRTEMNDIRLLLWQ STHKHSETFIVRDSPLLYYLHTKLAKLYVEAEKFAPALRHYLAAFRYHPLEMTEEGYRNGEWQKEDVLGYDESAAKEHDR LYKEWIQAEQKWKKAKDDIHLKESAWVRDGKKLSELAPQSKLWNDEVRMLDESRKKAKSNYDESYNKRYLAYLNKRKQIE SNELYAFANVVKKLEDDNKERLKIVNKLGTAGKGIYVLFDYKRNTDFFAYELILERAYRIWNENPNVLSDIAEQFRQDGK KEKAADFYEKALTEYLKNQNPSDDEKEKIIKANLRLATINADLKRNILAGNYYETFFRLSPDTPEKTRVSYEIGVFFNHK IGDPERGSNFLEYWLDKNSKDWNPSLAEDTGVPEMESIAYYYLSKKDKKQKKYELEQNKLNISLMQWKKIDEKLILAEKE RLDLIEKKQSLKKDLMVTTLDDILSQYRLMDLKIEDQEAVIRVLETKRNKIPLIKILFRLGVLSEENRDFKKAQEYYETV IKEGGETEVRVALKELERIKRILETGNIQPPINESI
Sequences:
>Translated_676_residues MESLNLGNLVSKRKFHLAIGSLLILIQTSVWGGEEDRRNPLSGLYLSPLQVISIEEIKSLDTEKRITIDEDSGIALRDEP KPTDPNAPDVPVAPGADLPVDPGQETGPKNIETKIREAEGLLKRYYSQFIEEKRIWEDREKGNVYNSRTEMNDIRLLLWQ STHKHSETFIVRDSPLLYYLHTKLAKLYVEAEKFAPALRHYLAAFRYHPLEMTEEGYRNGEWQKEDVLGYDESAAKEHDR LYKEWIQAEQKWKKAKDDIHLKESAWVRDGKKLSELAPQSKLWNDEVRMLDESRKKAKSNYDESYNKRYLAYLNKRKQIE SNELYAFANVVKKLEDDNKERLKIVNKLGTAGKGIYVLFDYKRNTDFFAYELILERAYRIWNENPNVLSDIAEQFRQDGK KEKAADFYEKALTEYLKNQNPSDDEKEKIIKANLRLATINADLKRNILAGNYYETFFRLSPDTPEKTRVSYEIGVFFNHK IGDPERGSNFLEYWLDKNSKDWNPSLAEDTGVPEMESIAYYYLSKKDKKQKKYELEQNKLNISLMQWKKIDEKLILAEKE RLDLIEKKQSLKKDLMVTTLDDILSQYRLMDLKIEDQEAVIRVLETKRNKIPLIKILFRLGVLSEENRDFKKAQEYYETV IKEGGETEVRVALKELERIKRILETGNIQPPINESI >Mature_676_residues MESLNLGNLVSKRKFHLAIGSLLILIQTSVWGGEEDRRNPLSGLYLSPLQVISIEEIKSLDTEKRITIDEDSGIALRDEP KPTDPNAPDVPVAPGADLPVDPGQETGPKNIETKIREAEGLLKRYYSQFIEEKRIWEDREKGNVYNSRTEMNDIRLLLWQ STHKHSETFIVRDSPLLYYLHTKLAKLYVEAEKFAPALRHYLAAFRYHPLEMTEEGYRNGEWQKEDVLGYDESAAKEHDR LYKEWIQAEQKWKKAKDDIHLKESAWVRDGKKLSELAPQSKLWNDEVRMLDESRKKAKSNYDESYNKRYLAYLNKRKQIE SNELYAFANVVKKLEDDNKERLKIVNKLGTAGKGIYVLFDYKRNTDFFAYELILERAYRIWNENPNVLSDIAEQFRQDGK KEKAADFYEKALTEYLKNQNPSDDEKEKIIKANLRLATINADLKRNILAGNYYETFFRLSPDTPEKTRVSYEIGVFFNHK IGDPERGSNFLEYWLDKNSKDWNPSLAEDTGVPEMESIAYYYLSKKDKKQKKYELEQNKLNISLMQWKKIDEKLILAEKE RLDLIEKKQSLKKDLMVTTLDDILSQYRLMDLKIEDQEAVIRVLETKRNKIPLIKILFRLGVLSEENRDFKKAQEYYETV IKEGGETEVRVALKELERIKRILETGNIQPPINESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79312; Mature: 79312
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLNLGNLVSKRKFHLAIGSLLILIQTSVWGGEEDRRNPLSGLYLSPLQVISIEEIKSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHEEHHHHHCC DTEKRITIDEDSGIALRDEPKPTDPNAPDVPVAPGADLPVDPGQETGPKNIETKIREAEG CCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLKRYYSQFIEEKRIWEDREKGNVYNSRTEMNDIRLLLWQSTHKHSETFIVRDSPLLYYL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEHHH HTKLAKLYVEAEKFAPALRHYLAAFRYHPLEMTEEGYRNGEWQKEDVLGYDESAAKEHDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCHHHCCCCCHHHHHHHHH LYKEWIQAEQKWKKAKDDIHLKESAWVRDGKKLSELAPQSKLWNDEVRMLDESRKKAKSN HHHHHHHHHHHHHHHHCCCEECHHHHHHCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHCC YDESYNKRYLAYLNKRKQIESNELYAFANVVKKLEDDNKERLKIVNKLGTAGKGIYVLFD CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEE YKRNTDFFAYELILERAYRIWNENPNVLSDIAEQFRQDGKKEKAADFYEKALTEYLKNQN ECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PSDDEKEKIIKANLRLATINADLKRNILAGNYYETFFRLSPDTPEKTRVSYEIGVFFNHK CCCHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHEEECCCCCCHHEEEEEEEEEEECC IGDPERGSNFLEYWLDKNSKDWNPSLAEDTGVPEMESIAYYYLSKKDKKQKKYELEQNKL CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC NISLMQWKKIDEKLILAEKERLDLIEKKQSLKKDLMVTTLDDILSQYRLMDLKIEDQEAV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCHHHH IRVLETKRNKIPLIKILFRLGVLSEENRDFKKAQEYYETVIKEGGETEVRVALKELERIK HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RILETGNIQPPINESI HHHHHCCCCCCCCCCC >Mature Secondary Structure MESLNLGNLVSKRKFHLAIGSLLILIQTSVWGGEEDRRNPLSGLYLSPLQVISIEEIKSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHEEHHHHHCC DTEKRITIDEDSGIALRDEPKPTDPNAPDVPVAPGADLPVDPGQETGPKNIETKIREAEG CCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLKRYYSQFIEEKRIWEDREKGNVYNSRTEMNDIRLLLWQSTHKHSETFIVRDSPLLYYL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCEEHHH HTKLAKLYVEAEKFAPALRHYLAAFRYHPLEMTEEGYRNGEWQKEDVLGYDESAAKEHDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHCCCCCCCHHHCCCCCHHHHHHHHH LYKEWIQAEQKWKKAKDDIHLKESAWVRDGKKLSELAPQSKLWNDEVRMLDESRKKAKSN HHHHHHHHHHHHHHHHCCCEECHHHHHHCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHCC YDESYNKRYLAYLNKRKQIESNELYAFANVVKKLEDDNKERLKIVNKLGTAGKGIYVLFD CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEE YKRNTDFFAYELILERAYRIWNENPNVLSDIAEQFRQDGKKEKAADFYEKALTEYLKNQN ECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PSDDEKEKIIKANLRLATINADLKRNILAGNYYETFFRLSPDTPEKTRVSYEIGVFFNHK CCCHHHHHHHHHCCEEEEECCHHHHHHHCCCHHHHHEEECCCCCCHHEEEEEEEEEEECC IGDPERGSNFLEYWLDKNSKDWNPSLAEDTGVPEMESIAYYYLSKKDKKQKKYELEQNKL CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC NISLMQWKKIDEKLILAEKERLDLIEKKQSLKKDLMVTTLDDILSQYRLMDLKIEDQEAV CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCHHHH IRVLETKRNKIPLIKILFRLGVLSEENRDFKKAQEYYETVIKEGGETEVRVALKELERIK HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RILETGNIQPPINESI HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA