Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183219878

Identifier: 183219878

GI number: 183219878

Start: 454243

End: 454914

Strand: Direct

Name: 183219878

Synonym: LEPBI_I0459

Alternate gene names: NA

Gene position: 454243-454914 (Clockwise)

Preceding gene: 183219877

Following gene: 183219879

Centisome position: 12.62

GC content: 39.43

Gene sequence:

>672_bases
ATGCCTGAAGACAACGATTACCTTTCTTATATGAACAAAGGCAATTATGCCATGGCTCTTAATCTTCTCGATCAAGCCTT
ACTGCAAAATCCAGAAGATCCGATCCTTTTATACAATTTTGCCCTTTGTTGTTTCCAAACCAAAAACTTCAAAAAAACCA
TCCAAGTTTTGGGTCGGATTTTAAGTGAATACCCAGGTTTCATTGAATTGGACAATGTGTACCGACTGAAAGTATTTTCC
CTTGTGGAACTCAAAGATTGGGAAAATGCAGAAACCATCATCAAAGAAAGATTACAAATTGCCGTTGATGACGCAAAACT
CCTCTCGTTCTTAGCTCATGTTTATGAATACACACACCGTTTGGAAGAAGCCATCTCCGTCCATCGAAGGATTTTAAAAG
CAAATCCAGATTACAAGAACAGCTTAAATTCACTTGGTTACCTCCTTGCTCTGAAAAAGAAGCTAACACCAGACGAAAGG
GCAGAGGCAATACGTTCTTTAAAAAAGGCTTTAGAGCTTGATCCGAATAATCCTGCCTATTTGGATTCTTTTGGATATTT
TTTGCAGACCAACGGGAAACCAGAAGAAGCCTGGAAGGCCTATCGCAAAGCCTTACAAAAGAACCCAAACCACCCAGTAC
TTCTCGAAAGACTCAAGAACCTGAAGAAATAA

Upstream 100 bases:

>100_bases
ACTTTGAGGCCTATGCGCAAGGGAAAATTCCGCTCACTCCCATCCAATTGGATCTCACAGAGAAAAACCGACTGAAAGAA
TTGCTAACGAATCGATAACA

Downstream 100 bases:

>100_bases
ATCTCCCTTTTGTTGACACAGTCCTTCTGCCAAAAACACTGGTGTTTCAAGGACTTTCTCGGGATGTAGCGCAGTGGTAG
CGCATCTGTTTTGGGTACAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR-Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPEDNDYLSYMNKGNYAMALNLLDQALLQNPEDPILLYNFALCCFQTKNFKKTIQVLGRILSEYPGFIELDNVYRLKVFS
LVELKDWENAETIIKERLQIAVDDAKLLSFLAHVYEYTHRLEEAISVHRRILKANPDYKNSLNSLGYLLALKKKLTPDER
AEAIRSLKKALELDPNNPAYLDSFGYFLQTNGKPEEAWKAYRKALQKNPNHPVLLERLKNLKK

Sequences:

>Translated_223_residues
MPEDNDYLSYMNKGNYAMALNLLDQALLQNPEDPILLYNFALCCFQTKNFKKTIQVLGRILSEYPGFIELDNVYRLKVFS
LVELKDWENAETIIKERLQIAVDDAKLLSFLAHVYEYTHRLEEAISVHRRILKANPDYKNSLNSLGYLLALKKKLTPDER
AEAIRSLKKALELDPNNPAYLDSFGYFLQTNGKPEEAWKAYRKALQKNPNHPVLLERLKNLKK
>Mature_222_residues
PEDNDYLSYMNKGNYAMALNLLDQALLQNPEDPILLYNFALCCFQTKNFKKTIQVLGRILSEYPGFIELDNVYRLKVFSL
VELKDWENAETIIKERLQIAVDDAKLLSFLAHVYEYTHRLEEAISVHRRILKANPDYKNSLNSLGYLLALKKKLTPDERA
EAIRSLKKALELDPNNPAYLDSFGYFLQTNGKPEEAWKAYRKALQKNPNHPVLLERLKNLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25938; Mature: 25807

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDNDYLSYMNKGNYAMALNLLDQALLQNPEDPILLYNFALCCFQTKNFKKTIQVLGRI
CCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
LSEYPGFIELDNVYRLKVFSLVELKDWENAETIIKERLQIAVDDAKLLSFLAHVYEYTHR
HHHCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAISVHRRILKANPDYKNSLNSLGYLLALKKKLTPDERAEAIRSLKKALELDPNNPAY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCH
LDSFGYFLQTNGKPEEAWKAYRKALQKNPNHPVLLERLKNLKK
HHHHCHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PEDNDYLSYMNKGNYAMALNLLDQALLQNPEDPILLYNFALCCFQTKNFKKTIQVLGRI
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
LSEYPGFIELDNVYRLKVFSLVELKDWENAETIIKERLQIAVDDAKLLSFLAHVYEYTHR
HHHCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAISVHRRILKANPDYKNSLNSLGYLLALKKKLTPDERAEAIRSLKKALELDPNNPAY
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCH
LDSFGYFLQTNGKPEEAWKAYRKALQKNPNHPVLLERLKNLKK
HHHHCHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA