| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pbuE [H]
Identifier: 183219868
GI number: 183219868
Start: 444544
End: 445755
Strand: Direct
Name: pbuE [H]
Synonym: LEPBI_I0449
Alternate gene names: 183219868
Gene position: 444544-445755 (Clockwise)
Preceding gene: 183219867
Following gene: 183219871
Centisome position: 12.35
GC content: 40.76
Gene sequence:
>1212_bases ATGGAATTTAAATTCACTCGCTATCATGTATTTGTCGTTGGTTTACTTGCTTTTTTGCAATTTACCGTTGTTTTGGATTT TCTGATCTTATCACCGTTAGGTGTACTTGTCATGAGTGAGCTACAAATCACTACCGAAAAATTTGGATATGTGGTTTCCG CTTATGCCTTTAGCGCCGGGATTTCTGGACTACTTGCTGCAGGGTTTGCGGATCGTTTTGATCGTAAAAAACTCCTCTTG TTTTTTTATATCGGATTTGTTCTCGCAACTTTCCTTTGTGGGATTGCAGTTCATTATGAATTTTTACTATTTGTCAGAAT TTTGACTGGTATGTTTGCAGGAGTATTGTCCTCTATTTCATTTGCCATTGTTGCTGATTTATTTCCTTTGCAAGTTCGGG GCAGAGTGATGGGTTTTATCATGACTGCTTTTGCGGCAAGCCAAGTATTTGGTTTACCCATTGGAATATATATTTCGAAT CTTTGGGGTTGGCAATCTCCATTTCTTATGATCGCAAGCGTGAGTGGGGTTGTTGGGGTTTTTATTTTTCTCTTTCTAAA ACCTGTGACCTCACACTTGGATCAAAAAACTGACACCCATGCCTTCCATCATTTGGTAACGACACTCACCATGCCTAAAT ACATACCGGCCTTCATTGCAACAACTCTAATGGCAACAGGTGGGTTTATGCTCATGCCATTTGGTTCCGCATTTTCTGTT CATAACTTGGGGATGAAATTGGAAGATTTACCCTTTATTTATATGGTCACAGGGATTGTTTCTATGTTAGGTGGTCCAAT GATGGGACGATTGAGTGATTCGATAGGGAAATACAATATGTTTGTTATCGCATCGTCCATTGCAGCACTCATCATCCTTT ATTTTACCAGGCTAACCGTGACACCTCTTCCGATTGTCATTGTTCTCAATTCACTTTTATTTGTGTTCATAGCAGCTCGT ATGATTTCAGCCAATGCGATTAATTCTGCAGTGCCAGAACTGCATGACCGTGGTGCCTTTATGGCCATCAGCTCTTCTAT CCAACAAATCTCAGGTGGGATTGCGGCTTCCGTTGCCGGGCTCATTGTGATCCAAACTCCCAGCGGTTATTTAGAGCATT ACGAAGTGTTAGGGTATGTGGTGGCCACTGCAATTGTATGTACAGTGATCCTGATGTATCAAGTGAATCAGATGGTAATG GGAAAAAAATAA
Upstream 100 bases:
>100_bases TCGGCGAATAAAATAGATTGAGAAACGATACTTTCGGTTGAAGGGAGAGTTCGCCGAACTCCGGGATTCAAGTCTATCGC TTGAAAGAATAGGAAATAGA
Downstream 100 bases:
>100_bases GGTAATGGTGAAACCTATTGTTTATCTAAATATAGGTGAAACATTTTTTTCTAAAGGATTCCAAATTGTTGGATAGAGAG TTTTTGTATAAAAAATACCT
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MEFKFTRYHVFVVGLLAFLQFTVVLDFLILSPLGVLVMSELQITTEKFGYVVSAYAFSAGISGLLAAGFADRFDRKKLLL FFYIGFVLATFLCGIAVHYEFLLFVRILTGMFAGVLSSISFAIVADLFPLQVRGRVMGFIMTAFAASQVFGLPIGIYISN LWGWQSPFLMIASVSGVVGVFIFLFLKPVTSHLDQKTDTHAFHHLVTTLTMPKYIPAFIATTLMATGGFMLMPFGSAFSV HNLGMKLEDLPFIYMVTGIVSMLGGPMMGRLSDSIGKYNMFVIASSIAALIILYFTRLTVTPLPIVIVLNSLLFVFIAAR MISANAINSAVPELHDRGAFMAISSSIQQISGGIAASVAGLIVIQTPSGYLEHYEVLGYVVATAIVCTVILMYQVNQMVM GKK
Sequences:
>Translated_403_residues MEFKFTRYHVFVVGLLAFLQFTVVLDFLILSPLGVLVMSELQITTEKFGYVVSAYAFSAGISGLLAAGFADRFDRKKLLL FFYIGFVLATFLCGIAVHYEFLLFVRILTGMFAGVLSSISFAIVADLFPLQVRGRVMGFIMTAFAASQVFGLPIGIYISN LWGWQSPFLMIASVSGVVGVFIFLFLKPVTSHLDQKTDTHAFHHLVTTLTMPKYIPAFIATTLMATGGFMLMPFGSAFSV HNLGMKLEDLPFIYMVTGIVSMLGGPMMGRLSDSIGKYNMFVIASSIAALIILYFTRLTVTPLPIVIVLNSLLFVFIAAR MISANAINSAVPELHDRGAFMAISSSIQQISGGIAASVAGLIVIQTPSGYLEHYEVLGYVVATAIVCTVILMYQVNQMVM GKK >Mature_403_residues MEFKFTRYHVFVVGLLAFLQFTVVLDFLILSPLGVLVMSELQITTEKFGYVVSAYAFSAGISGLLAAGFADRFDRKKLLL FFYIGFVLATFLCGIAVHYEFLLFVRILTGMFAGVLSSISFAIVADLFPLQVRGRVMGFIMTAFAASQVFGLPIGIYISN LWGWQSPFLMIASVSGVVGVFIFLFLKPVTSHLDQKTDTHAFHHLVTTLTMPKYIPAFIATTLMATGGFMLMPFGSAFSV HNLGMKLEDLPFIYMVTGIVSMLGGPMMGRLSDSIGKYNMFVIASSIAALIILYFTRLTVTPLPIVIVLNSLLFVFIAAR MISANAINSAVPELHDRGAFMAISSSIQQISGGIAASVAGLIVIQTPSGYLEHYEVLGYVVATAIVCTVILMYQVNQMVM GKK
Specific function: Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and inosine, as well as purine bases guanine, adenine and hypoxanthine, and purine base analogs 2,6- diaminopurine and 6-mercaptopurine. Therefore plays a role in maintaining t
COG id: COG2814
COG function: function code G; Arabinose efflux permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. PbuE (TC 2.A.1.2.25) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43987; Mature: 43987
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKFTRYHVFVVGLLAFLQFTVVLDFLILSPLGVLVMSELQITTEKFGYVVSAYAFSAG CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISGLLAAGFADRFDRKKLLLFFYIGFVLATFLCGIAVHYEFLLFVRILTGMFAGVLSSIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAIVADLFPLQVRGRVMGFIMTAFAASQVFGLPIGIYISNLWGWQSPFLMIASVSGVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FIFLFLKPVTSHLDQKTDTHAFHHLVTTLTMPKYIPAFIATTLMATGGFMLMPFGSAFSV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH HNLGMKLEDLPFIYMVTGIVSMLGGPMMGRLSDSIGKYNMFVIASSIAALIILYFTRLTV HHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC TPLPIVIVLNSLLFVFIAARMISANAINSAVPELHDRGAFMAISSSIQQISGGIAASVAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHC LIVIQTPSGYLEHYEVLGYVVATAIVCTVILMYQVNQMVMGKK EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEFKFTRYHVFVVGLLAFLQFTVVLDFLILSPLGVLVMSELQITTEKFGYVVSAYAFSAG CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISGLLAAGFADRFDRKKLLLFFYIGFVLATFLCGIAVHYEFLLFVRILTGMFAGVLSSIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAIVADLFPLQVRGRVMGFIMTAFAASQVFGLPIGIYISNLWGWQSPFLMIASVSGVVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FIFLFLKPVTSHLDQKTDTHAFHHLVTTLTMPKYIPAFIATTLMATGGFMLMPFGSAFSV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH HNLGMKLEDLPFIYMVTGIVSMLGGPMMGRLSDSIGKYNMFVIASSIAALIILYFTRLTV HHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC TPLPIVIVLNSLLFVFIAARMISANAINSAVPELHDRGAFMAISSSIQQISGGIAASVAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHC LIVIQTPSGYLEHYEVLGYVVATAIVCTVILMYQVNQMVMGKK EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA