Click here to switch to the map view.

The map label for this gene is rhsD [C]

Identifier: 183219861

GI number: 183219861

Start: 432317

End: 434188

Strand: Direct

Name: rhsD [C]

Synonym: LEPBI_I0442

Alternate gene names: 183219861

Gene position: 432317-434188 (Clockwise)

Preceding gene: 183219859

Following gene: 183219862

Centisome position: 12.01

GC content: 38.03

Gene sequence:

>1872_bases
GTGACAAGAGTGAATAGTCCGAATACAGGGATTGTTGGCTATTCCTATGATGCTATGGGGAATATGATTGGTCGTAACGG
TGACACACTTGTATACAACGCACAAAACAAACTTCAACGAATTGAGACCATTGGAGGAGACAAGTTCGAATACACGTATG
ACCATTCGGGGATGAGGATTAAAAAATCCTTACAGAATTCAAATACTACGACGTATAGCTTTGGAAACTATTATGAAATC
CATCGATCTCCAGGAGTACAAGAGAAACATACGTTGTACGTGATTGGTGCGGAAGAAGATATGGTTGCCCAGTATAGTCG
AGGGGATGTTATTCTACTGAATCAGATGGCTTCTAACGAATGGTTAGTGAATCCATTTTGTAAAGATGTAAATATAGATT
GTGAAACTTACTGGAAAAACAAAGTTGGCTTTGTCTTGAATACATTCCTTGAAGATATGAATATTTATAAGGATGGAAAG
ATCGGAAAAGGGCACAGAGTATTACCATGGCTAGTATTACTTGGATTTCTATTCTGGGTGGTATACAAAACAAAAGACCA
AAGGGAAGAAACAAATACTAAAAATCAATCCTTTGACTTATTTGGAATTTCTATTCTACCTAATTTGATATACCGAATAG
ATAGACAAATTCCTCGTTATGGAACTGCATTATTTGTAGTCCTCTTTACTTTTACCACTACAGCAGGATGTTTCCCATTA
TTGCTCGGAGGTGCGGAGGGCGAATCTGGAACACCGATTTGGATGCTAGGACTTGGGAATATACCTAGCGATACGCAATC
AGTAGGTGATGAGCCTCCTGGTCAAGGTGGTGGGGGCGGCGGTTCTTCTACAGGGAATGCGAGAGTTACTGGGATGTACT
TTTTCCACCCAGATCATTTGGGAAGTATTACGATGATCACCGATGGGAATGGCAATGTTCTTGCTGGTGGTGAAAGGGGC
GGTAAAAGTCATATTACATACAAACCATATGGAGAAATTCTTAGAACTGACTCTTATGGTCCAGACATTACTAAATTCAA
ATATACAGGGCAAGAAGAAGACCAGGAAAGTGGTTTATACTACTACAAGTCTCGGTATTATGATTCAAATATAGCCCGAT
TTGTATCCAATGATGGAATGGTTTTTCCCGATAAAGATCAGGGTATGAATAGAATGATGTATGTTGAAGGTAATCCTTTA
AAATGGAGAGATCGCAGTGGAAATAGAATATCCACACCACTTGCTTGGGGCATAATGGGTGCATTGTCGGCTCAACGTTA
TGGTTTATCTGCAGCGGAAGGGTTCGCATTAGGTTATGGAGTTGGAAATCGAATAAACAATAGAAGTAAGAGATTTAATC
TAAAGCGAAGTTTTGATAATACATTAGGTAATAATGGTGCACATGGTTGGCTGACAAGAAATGCATTTAGTACAGAAAAG
ATTTCGAGATGGTATAACAGAGGTAAAAGTGGTTTTGGTATTGGCTCATTTGGTTCTCCAGATAAATATGAAAATACACA
CCAATATGCCGTACATACAACACTTAATATAATGCTGAGGGATGGTGAAACTTGCAAAAGACTATTAGGGGATAATTGTG
CAAATGGAAGAATGTTGTTATATATTATGGCACATGATTCAAGAAAGCGATTTGAAGATGTTGCCAATATTTCAAATCGA
AATAATGTTTCATTGCCAAACATCGATATAAATATTGACCCAGAAACTGCATCGGCATTATTCTATATTTGGATTGATTA
TTCTAATTCCAAAAAGGTTCAAAATGGTGGAGTTTCTTGTGCTGATGATGATAATCTAACAGGTACTCAAGGTTGTAGTC
CTGCAGATAAACCACCAAAACCAGAAGAATAA

Upstream 100 bases:

>100_bases
GGAAGCCCAATCTTCGTGACAGATTGCCCATTATAGGAAGCCAGCCGGCTTAAAGGCGACTATATTTTATTCCTATGATA
ACGGAAATCATATTCATGCG

Downstream 100 bases:

>100_bases
AAGGTTTTTAATATGAAGATATTTATTATTTTAGTTTTAATCATATTTTCTAGTAATTGTGCGACTGAATCTAATTGTAT
GGAAAAGGCTGATAAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Membrane Protein; YD Repeat-Containing Protein; YD Repeat-/RHS Repeat-Containing Protein; Cell Well Associated RhsD Protein; RHS Repeat Family; Rhs Family Protein

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MTRVNSPNTGIVGYSYDAMGNMIGRNGDTLVYNAQNKLQRIETIGGDKFEYTYDHSGMRIKKSLQNSNTTTYSFGNYYEI
HRSPGVQEKHTLYVIGAEEDMVAQYSRGDVILLNQMASNEWLVNPFCKDVNIDCETYWKNKVGFVLNTFLEDMNIYKDGK
IGKGHRVLPWLVLLGFLFWVVYKTKDQREETNTKNQSFDLFGISILPNLIYRIDRQIPRYGTALFVVLFTFTTTAGCFPL
LLGGAEGESGTPIWMLGLGNIPSDTQSVGDEPPGQGGGGGGSSTGNARVTGMYFFHPDHLGSITMITDGNGNVLAGGERG
GKSHITYKPYGEILRTDSYGPDITKFKYTGQEEDQESGLYYYKSRYYDSNIARFVSNDGMVFPDKDQGMNRMMYVEGNPL
KWRDRSGNRISTPLAWGIMGALSAQRYGLSAAEGFALGYGVGNRINNRSKRFNLKRSFDNTLGNNGAHGWLTRNAFSTEK
ISRWYNRGKSGFGIGSFGSPDKYENTHQYAVHTTLNIMLRDGETCKRLLGDNCANGRMLLYIMAHDSRKRFEDVANISNR
NNVSLPNIDINIDPETASALFYIWIDYSNSKKVQNGGVSCADDDNLTGTQGCSPADKPPKPEE

Sequences:

>Translated_623_residues
MTRVNSPNTGIVGYSYDAMGNMIGRNGDTLVYNAQNKLQRIETIGGDKFEYTYDHSGMRIKKSLQNSNTTTYSFGNYYEI
HRSPGVQEKHTLYVIGAEEDMVAQYSRGDVILLNQMASNEWLVNPFCKDVNIDCETYWKNKVGFVLNTFLEDMNIYKDGK
IGKGHRVLPWLVLLGFLFWVVYKTKDQREETNTKNQSFDLFGISILPNLIYRIDRQIPRYGTALFVVLFTFTTTAGCFPL
LLGGAEGESGTPIWMLGLGNIPSDTQSVGDEPPGQGGGGGGSSTGNARVTGMYFFHPDHLGSITMITDGNGNVLAGGERG
GKSHITYKPYGEILRTDSYGPDITKFKYTGQEEDQESGLYYYKSRYYDSNIARFVSNDGMVFPDKDQGMNRMMYVEGNPL
KWRDRSGNRISTPLAWGIMGALSAQRYGLSAAEGFALGYGVGNRINNRSKRFNLKRSFDNTLGNNGAHGWLTRNAFSTEK
ISRWYNRGKSGFGIGSFGSPDKYENTHQYAVHTTLNIMLRDGETCKRLLGDNCANGRMLLYIMAHDSRKRFEDVANISNR
NNVSLPNIDINIDPETASALFYIWIDYSNSKKVQNGGVSCADDDNLTGTQGCSPADKPPKPEE
>Mature_622_residues
TRVNSPNTGIVGYSYDAMGNMIGRNGDTLVYNAQNKLQRIETIGGDKFEYTYDHSGMRIKKSLQNSNTTTYSFGNYYEIH
RSPGVQEKHTLYVIGAEEDMVAQYSRGDVILLNQMASNEWLVNPFCKDVNIDCETYWKNKVGFVLNTFLEDMNIYKDGKI
GKGHRVLPWLVLLGFLFWVVYKTKDQREETNTKNQSFDLFGISILPNLIYRIDRQIPRYGTALFVVLFTFTTTAGCFPLL
LGGAEGESGTPIWMLGLGNIPSDTQSVGDEPPGQGGGGGGSSTGNARVTGMYFFHPDHLGSITMITDGNGNVLAGGERGG
KSHITYKPYGEILRTDSYGPDITKFKYTGQEEDQESGLYYYKSRYYDSNIARFVSNDGMVFPDKDQGMNRMMYVEGNPLK
WRDRSGNRISTPLAWGIMGALSAQRYGLSAAEGFALGYGVGNRINNRSKRFNLKRSFDNTLGNNGAHGWLTRNAFSTEKI
SRWYNRGKSGFGIGSFGSPDKYENTHQYAVHTTLNIMLRDGETCKRLLGDNCANGRMLLYIMAHDSRKRFEDVANISNRN
NVSLPNIDINIDPETASALFYIWIDYSNSKKVQNGGVSCADDDNLTGTQGCSPADKPPKPEE

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69530; Mature: 69399

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVNSPNTGIVGYSYDAMGNMIGRNGDTLVYNAQNKLQRIETIGGDKFEYTYDHSGMRI
CCCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCEEEEECCCCCCH
KKSLQNSNTTTYSFGNYYEIHRSPGVQEKHTLYVIGAEEDMVAQYSRGDVILLNQMASNE
HHHHCCCCCEEEECCCEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCC
WLVNPFCKDVNIDCETYWKNKVGFVLNTFLEDMNIYKDGKIGKGHRVLPWLVLLGFLFWV
EEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHH
VYKTKDQREETNTKNQSFDLFGISILPNLIYRIDRQIPRYGTALFVVLFTFTTTAGCFPL
HHCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
LLGGAEGESGTPIWMLGLGNIPSDTQSVGDEPPGQGGGGGGSSTGNARVTGMYFFHPDHL
EEECCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GSITMITDGNGNVLAGGERGGKSHITYKPYGEILRTDSYGPDITKFKYTGQEEDQESGLY
CEEEEEECCCCCEEECCCCCCCCCEEECCCHHHEECCCCCCCCEEEEECCCCCCCCCCEE
YYKSRYYDSNIARFVSNDGMVFPDKDQGMNRMMYVEGNPLKWRDRSGNRISTPLAWGIMG
EEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEECCCHHHHHHH
ALSAQRYGLSAAEGFALGYGVGNRINNRSKRFNLKRSFDNTLGNNGAHGWLTRNAFSTEK
HHHHHHCCCCHHCCCEEECCCCCCCCCCHHHEEEHHHHHHHCCCCCCCCEEECCCCCHHH
ISRWYNRGKSGFGIGSFGSPDKYENTHQYAVHTTLNIMLRDGETCKRLLGDNCANGRMLL
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHCCCCCCCEEEE
YIMAHDSRKRFEDVANISNRNNVSLPNIDINIDPETASALFYIWIDYSNSKKVQNGGVSC
EEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEECCCCCEE
ADDDNLTGTQGCSPADKPPKPEE
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRVNSPNTGIVGYSYDAMGNMIGRNGDTLVYNAQNKLQRIETIGGDKFEYTYDHSGMRI
CCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCEEEEECCCCCCH
KKSLQNSNTTTYSFGNYYEIHRSPGVQEKHTLYVIGAEEDMVAQYSRGDVILLNQMASNE
HHHHCCCCCEEEECCCEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCC
WLVNPFCKDVNIDCETYWKNKVGFVLNTFLEDMNIYKDGKIGKGHRVLPWLVLLGFLFWV
EEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHH
VYKTKDQREETNTKNQSFDLFGISILPNLIYRIDRQIPRYGTALFVVLFTFTTTAGCFPL
HHCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
LLGGAEGESGTPIWMLGLGNIPSDTQSVGDEPPGQGGGGGGSSTGNARVTGMYFFHPDHL
EEECCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GSITMITDGNGNVLAGGERGGKSHITYKPYGEILRTDSYGPDITKFKYTGQEEDQESGLY
CEEEEEECCCCCEEECCCCCCCCCEEECCCHHHEECCCCCCCCEEEEECCCCCCCCCCEE
YYKSRYYDSNIARFVSNDGMVFPDKDQGMNRMMYVEGNPLKWRDRSGNRISTPLAWGIMG
EEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEECCCHHHHHHH
ALSAQRYGLSAAEGFALGYGVGNRINNRSKRFNLKRSFDNTLGNNGAHGWLTRNAFSTEK
HHHHHHCCCCHHCCCEEECCCCCCCCCCHHHEEEHHHHHHHCCCCCCCCEEECCCCCHHH
ISRWYNRGKSGFGIGSFGSPDKYENTHQYAVHTTLNIMLRDGETCKRLLGDNCANGRMLL
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHCCCCCCCEEEE
YIMAHDSRKRFEDVANISNRNNVSLPNIDINIDPETASALFYIWIDYSNSKKVQNGGVSC
EEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEECCCCCEE
ADDDNLTGTQGCSPADKPPKPEE
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA