| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yhhN [C]
Identifier: 183219836
GI number: 183219836
Start: 411134
End: 411787
Strand: Reverse
Name: yhhN [C]
Synonym: LEPBI_I0414
Alternate gene names: 183219836
Gene position: 411787-411134 (Counterclockwise)
Preceding gene: 183219837
Following gene: 183219831
Centisome position: 11.44
GC content: 37.92
Gene sequence:
>654_bases ATGAATCAATCTCTCATTTTAATTTCGGCACTCCCACTCCTTGGAATCCTCCTCTATTTTGAAAAAAAAGAATCGATAAA AGGAATGTTAGGTGTAAAACCAATTTTATCTTCACTTTTTGTCATCACAGCGTTTCTCCAAATCAATCAATATTCAAGTT ACCAGTATCTCATCCTTGTTGGGTTGGTTCTTAGTTTTATTGGTGATATATGTCTGATTTTTTTCTTTCATAAAAAAGTT TTCACAGCAGGTCTTGGTGCTTTTCTCGCAGGTCATGTGATGTATACGATTGCTTTTTCTCGATTAGGAGAGGTGGGTTC AGTCATGATCACAGTGGGAACAGTTTTTTTGCTGACAAGTGTCGTGATTTATATGCGACTCCAGGCAAATCTTGGGAATA TGCGTGCACCTGTTTTAGCCTATATCAGTATTATCACAGTGATGGTGATTGGAGCTGCTTCTTTTTGGGACCACACCACA ATCAACATCAATTGCCGCAATTTTGTGTTAACCGGTGCTCTGCTTTTTTACATCTCTGATATATTTGTAGCAAGGCACCG ATTCGTCCAAAAAGAATTCCTGAATCGAGCGATTGGACTACCTATGTACTACTCAGCACAATTTTTGATCGCATTATCAA CTGGTCTAATTTAA
Upstream 100 bases:
>100_bases AATAAAACTAACTCCCATCAAGAAAAACCAGTAGCAAATAAAATTGCATTCGATCGATTTTTGTGCTAAGATCCTTTCCA TTGGCAAAGGACATCTCTTC
Downstream 100 bases:
>100_bases AAGATTTAATGAATATGTATGAGTGATACTAAAACAACTAACAATAACTCTATGAGAATAGAATACTGGAGACAGTCCTT TGAAAATAATCTCTTCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: YhhN Family Protein; Transmembrane Protein; Transmembrane B
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI
Sequences:
>Translated_217_residues MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI >Mature_217_residues MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI
Specific function: Unknown
COG id: COG3714
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24130; Mature: 24130
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GLVLSFIGDICLIFFFHKKVFTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTTININCRNFVLTGALLFYISD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH IFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GLVLSFIGDICLIFFFHKKVFTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTTININCRNFVLTGALLFYISD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH IFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA