Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is yhhN [C]

Identifier: 183219836

GI number: 183219836

Start: 411134

End: 411787

Strand: Reverse

Name: yhhN [C]

Synonym: LEPBI_I0414

Alternate gene names: 183219836

Gene position: 411787-411134 (Counterclockwise)

Preceding gene: 183219837

Following gene: 183219831

Centisome position: 11.44

GC content: 37.92

Gene sequence:

>654_bases
ATGAATCAATCTCTCATTTTAATTTCGGCACTCCCACTCCTTGGAATCCTCCTCTATTTTGAAAAAAAAGAATCGATAAA
AGGAATGTTAGGTGTAAAACCAATTTTATCTTCACTTTTTGTCATCACAGCGTTTCTCCAAATCAATCAATATTCAAGTT
ACCAGTATCTCATCCTTGTTGGGTTGGTTCTTAGTTTTATTGGTGATATATGTCTGATTTTTTTCTTTCATAAAAAAGTT
TTCACAGCAGGTCTTGGTGCTTTTCTCGCAGGTCATGTGATGTATACGATTGCTTTTTCTCGATTAGGAGAGGTGGGTTC
AGTCATGATCACAGTGGGAACAGTTTTTTTGCTGACAAGTGTCGTGATTTATATGCGACTCCAGGCAAATCTTGGGAATA
TGCGTGCACCTGTTTTAGCCTATATCAGTATTATCACAGTGATGGTGATTGGAGCTGCTTCTTTTTGGGACCACACCACA
ATCAACATCAATTGCCGCAATTTTGTGTTAACCGGTGCTCTGCTTTTTTACATCTCTGATATATTTGTAGCAAGGCACCG
ATTCGTCCAAAAAGAATTCCTGAATCGAGCGATTGGACTACCTATGTACTACTCAGCACAATTTTTGATCGCATTATCAA
CTGGTCTAATTTAA

Upstream 100 bases:

>100_bases
AATAAAACTAACTCCCATCAAGAAAAACCAGTAGCAAATAAAATTGCATTCGATCGATTTTTGTGCTAAGATCCTTTCCA
TTGGCAAAGGACATCTCTTC

Downstream 100 bases:

>100_bases
AAGATTTAATGAATATGTATGAGTGATACTAAAACAACTAACAATAACTCTATGAGAATAGAATACTGGAGACAGTCCTT
TGAAAATAATCTCTTCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: YhhN Family Protein; Transmembrane Protein; Transmembrane B

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV
FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT
ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI

Sequences:

>Translated_217_residues
MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV
FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT
ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI
>Mature_217_residues
MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILVGLVLSFIGDICLIFFFHKKV
FTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTSVVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTT
ININCRNFVLTGALLFYISDIFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24130; Mature: 24130

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GLVLSFIGDICLIFFFHKKVFTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTTININCRNFVLTGALLFYISD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
IFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQSLILISALPLLGILLYFEKKESIKGMLGVKPILSSLFVITAFLQINQYSSYQYLILV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GLVLSFIGDICLIFFFHKKVFTAGLGAFLAGHVMYTIAFSRLGEVGSVMITVGTVFLLTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVIYMRLQANLGNMRAPVLAYISIITVMVIGAASFWDHTTININCRNFVLTGALLFYISD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
IFVARHRFVQKEFLNRAIGLPMYYSAQFLIALSTGLI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA