| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219827
Identifier: 183219827
GI number: 183219827
Start: 404009
End: 404896
Strand: Reverse
Name: 183219827
Synonym: LEPBI_I0405
Alternate gene names: NA
Gene position: 404896-404009 (Counterclockwise)
Preceding gene: 183219828
Following gene: 183219826
Centisome position: 11.25
GC content: 31.76
Gene sequence:
>888_bases ATGAAACCAAACAATTCAATCCTATCTTTCCTATTATTCATCATCATTCCCTTTTCCTTATTCGGCGAATCAAAACTATT TATGATGTATGGAATCAAACTTGGCCAAAAACGAAGTTTAGTTACAGAAATTTATGGAAAACCATTTAAATCTCACACAT TTGAAGATGGTTACAGCTACGATGCATTCAAATTAGATGAACATATTTTGGTCGTAGAATCTGAAAATAAAAGGCCAGAT TTAGTTTGGGCCATCCAAATCCAAGGGAACAAAAATCCAAAACATTTCGGATTGAACGATATCAATTTAGGTGATGAGGT CCAAAAAGTGATTTCTACCTTTGGAAAACCAGATGAAATTCGTAGTGCTTATGATGAACAAACAAAGGAAGAATTAAAAC AAATTCAATATTACTCCTACGATACTTCCAGGAATTTTAGTATCGAAGTTCAGAATCAAAAAGTAACGAGTATTAAACTT TCTTTCAAAGGGACTGCCGTTGTATCAGATTCATTAGAGATTCCATCCACTTTTAAAATCTTACAAGGTAACGATTTATA CCAAATATCACAATTACTCGATCAAAATTTTGTCTTAAAAGAAAAAGACAAAAAAGAGTATAAAATCGTTGGAAATCCAA TTACTTTTTTAAGCTCAAAAAATGAAATCACGAATCGATTCTTCCATCAACCGAACTCTTTAGCTAACCTGAATCCCAAA GAGATCATAGAATCCCTCGATCTTAAAAATGAGAAACAATTCATTTTTGGAAAATACCTAAAGTTTAAATTGGGAGAGGA AACCATTCACTTATTTTTTTTGAAAAGTTACGAAGGTTGGACTCTAAAAGAAATGAATATTGAAAACTCTGTTGATACCC AAGAGTGA
Upstream 100 bases:
>100_bases AAGGTTCGTTATTTGGATAAATTAGTCGATGAACTTGCGAAAGGCAAATCATTAGAAAAAATTTTAAGATCACCTTAACA ATCAACACAAGAGAAATCAA
Downstream 100 bases:
>100_bases AATTTTTAGAAAATATTTTGGCAAATAAATAAAATTAACGATAGGCATAGGAATCATATGAAACAATTCACATACTCATT CATTCTATTCACTTTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKPNNSILSFLLFIIIPFSLFGESKLFMMYGIKLGQKRSLVTEIYGKPFKSHTFEDGYSYDAFKLDEHILVVESENKRPD LVWAIQIQGNKNPKHFGLNDINLGDEVQKVISTFGKPDEIRSAYDEQTKEELKQIQYYSYDTSRNFSIEVQNQKVTSIKL SFKGTAVVSDSLEIPSTFKILQGNDLYQISQLLDQNFVLKEKDKKEYKIVGNPITFLSSKNEITNRFFHQPNSLANLNPK EIIESLDLKNEKQFIFGKYLKFKLGEETIHLFFLKSYEGWTLKEMNIENSVDTQE
Sequences:
>Translated_295_residues MKPNNSILSFLLFIIIPFSLFGESKLFMMYGIKLGQKRSLVTEIYGKPFKSHTFEDGYSYDAFKLDEHILVVESENKRPD LVWAIQIQGNKNPKHFGLNDINLGDEVQKVISTFGKPDEIRSAYDEQTKEELKQIQYYSYDTSRNFSIEVQNQKVTSIKL SFKGTAVVSDSLEIPSTFKILQGNDLYQISQLLDQNFVLKEKDKKEYKIVGNPITFLSSKNEITNRFFHQPNSLANLNPK EIIESLDLKNEKQFIFGKYLKFKLGEETIHLFFLKSYEGWTLKEMNIENSVDTQE >Mature_295_residues MKPNNSILSFLLFIIIPFSLFGESKLFMMYGIKLGQKRSLVTEIYGKPFKSHTFEDGYSYDAFKLDEHILVVESENKRPD LVWAIQIQGNKNPKHFGLNDINLGDEVQKVISTFGKPDEIRSAYDEQTKEELKQIQYYSYDTSRNFSIEVQNQKVTSIKL SFKGTAVVSDSLEIPSTFKILQGNDLYQISQLLDQNFVLKEKDKKEYKIVGNPITFLSSKNEITNRFFHQPNSLANLNPK EIIESLDLKNEKQFIFGKYLKFKLGEETIHLFFLKSYEGWTLKEMNIENSVDTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34265; Mature: 34265
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNNSILSFLLFIIIPFSLFGESKLFMMYGIKLGQKRSLVTEIYGKPFKSHTFEDGYSY CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DAFKLDEHILVVESENKRPDLVWAIQIQGNKNPKHFGLNDINLGDEVQKVISTFGKPDEI CEEEECCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH RSAYDEQTKEELKQIQYYSYDTSRNFSIEVQNQKVTSIKLSFKGTAVVSDSLEIPSTFKI HHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEEEEEEECCEEEEECCCCCCCEEEE LQGNDLYQISQLLDQNFVLKEKDKKEYKIVGNPITFLSSKNEITNRFFHQPNSLANLNPK ECCCCHHHHHHHHCCCCEEECCCCCCEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCHH EIIESLDLKNEKQFIFGKYLKFKLGEETIHLFFLKSYEGWTLKEMNIENSVDTQE HHHHHCCCCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKPNNSILSFLLFIIIPFSLFGESKLFMMYGIKLGQKRSLVTEIYGKPFKSHTFEDGYSY CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DAFKLDEHILVVESENKRPDLVWAIQIQGNKNPKHFGLNDINLGDEVQKVISTFGKPDEI CEEEECCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH RSAYDEQTKEELKQIQYYSYDTSRNFSIEVQNQKVTSIKLSFKGTAVVSDSLEIPSTFKI HHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCEEEEEEEEECCEEEEECCCCCCCEEEE LQGNDLYQISQLLDQNFVLKEKDKKEYKIVGNPITFLSSKNEITNRFFHQPNSLANLNPK ECCCCHHHHHHHHCCCCEEECCCCCCEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCHH EIIESLDLKNEKQFIFGKYLKFKLGEETIHLFFLKSYEGWTLKEMNIENSVDTQE HHHHHCCCCCCCHHHEEEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA