| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219823
Identifier: 183219823
GI number: 183219823
Start: 400750
End: 401286
Strand: Reverse
Name: 183219823
Synonym: LEPBI_I0401
Alternate gene names: NA
Gene position: 401286-400750 (Counterclockwise)
Preceding gene: 183219826
Following gene: 183219820
Centisome position: 11.15
GC content: 38.73
Gene sequence:
>537_bases ATGAACCAAGATACACTCCTTCTCATTTTAAAGGAAAGATTTGAAAGCCATCCTAACCGACACAAAGGAATCAAATGGGA TGCTGTGGAAGAGAAACTCAAAAAAAATCCAGATAAAATAAAGTCCCTTATCAAAATGGAAGAATCAGGTGGTGAGCCAG ATGTCGTGCTCTTTGATAAAAAAAATAATAGTTTTACCTTCTATGATTGTTCTGCGGAATCACCAAGTGGACGAAGGAGT TTCTGTTATGACAAAGAAGCCCTCCAATCGAGAAAAGAACACAAACCCAAGAGTAGTGCCATCGAGTTTGCAAAAACGAT GGGTACTAAAATCTTAAACGAAGAAGAGTATCGTTATCTACAAACGTTAGGTGAATTCGACAAAAAAACATCAAGTTGGA TTGAGACACCAACCTCCATACGTAAATTAGGTGGAGCAATCTTTTGCGACTATCGATACGGGACAGTTTTTTTATATCAT AATGGAGCCGAATCGTACTATGCCGTCCGCGGATTTCGATCTTCCCTTACGGTTTAA
Upstream 100 bases:
>100_bases AGTTGCCTAAAACGTAAACAATTAGTAAAATACAATATAGTTTCAGAGATCTAGTTGTCCGCTGGTCTTGATCCAATCTT AATCCGAAGTACGAAATCTT
Downstream 100 bases:
>100_bases TATTGTTTGATTTTGAAAAAATTTTATAAATCGAATTAAGCAGTTCTGACAAGATGATAGGTTTTTTCACACAATCGTCC ATTCCGTTCTCTAAGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNQDTLLLILKERFESHPNRHKGIKWDAVEEKLKKNPDKIKSLIKMEESGGEPDVVLFDKKNNSFTFYDCSAESPSGRRS FCYDKEALQSRKEHKPKSSAIEFAKTMGTKILNEEEYRYLQTLGEFDKKTSSWIETPTSIRKLGGAIFCDYRYGTVFLYH NGAESYYAVRGFRSSLTV
Sequences:
>Translated_178_residues MNQDTLLLILKERFESHPNRHKGIKWDAVEEKLKKNPDKIKSLIKMEESGGEPDVVLFDKKNNSFTFYDCSAESPSGRRS FCYDKEALQSRKEHKPKSSAIEFAKTMGTKILNEEEYRYLQTLGEFDKKTSSWIETPTSIRKLGGAIFCDYRYGTVFLYH NGAESYYAVRGFRSSLTV >Mature_178_residues MNQDTLLLILKERFESHPNRHKGIKWDAVEEKLKKNPDKIKSLIKMEESGGEPDVVLFDKKNNSFTFYDCSAESPSGRRS FCYDKEALQSRKEHKPKSSAIEFAKTMGTKILNEEEYRYLQTLGEFDKKTSSWIETPTSIRKLGGAIFCDYRYGTVFLYH NGAESYYAVRGFRSSLTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20589; Mature: 20589
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQDTLLLILKERFESHPNRHKGIKWDAVEEKLKKNPDKIKSLIKMEESGGEPDVVLFDK CCCCCEEHEEHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEC KNNSFTFYDCSAESPSGRRSFCYDKEALQSRKEHKPKSSAIEFAKTMGTKILNEEEYRYL CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH QTLGEFDKKTSSWIETPTSIRKLGGAIFCDYRYGTVFLYHNGAESYYAVRGFRSSLTV HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MNQDTLLLILKERFESHPNRHKGIKWDAVEEKLKKNPDKIKSLIKMEESGGEPDVVLFDK CCCCCEEHEEHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEC KNNSFTFYDCSAESPSGRRSFCYDKEALQSRKEHKPKSSAIEFAKTMGTKILNEEEYRYL CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH QTLGEFDKKTSSWIETPTSIRKLGGAIFCDYRYGTVFLYHNGAESYYAVRGFRSSLTV HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA