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The map label for this gene is nosD [H]

Identifier: 183219802

GI number: 183219802

Start: 380801

End: 382069

Strand: Reverse

Name: nosD [H]

Synonym: LEPBI_I0380

Alternate gene names: 183219802

Gene position: 382069-380801 (Counterclockwise)

Preceding gene: 183219803

Following gene: 183219801

Centisome position: 10.61

GC content: 33.57

Gene sequence:

>1269_bases
TTGCAAAAATCGAAACAGTTCCAAAAACTTTTCCATCACCTCTTTATTTCATTGCTTTTCCTTTTATTATTTCTTCCTAA
CTCGTATCAAGCAAGAACCATTACCGTTTGTAAAGGTTGTTCTCTAGACTCACTCAAACAAGCAATCCAAATTGCAAACC
ATGGTGATAGAATCCATATCAAAACTGGAATTTACAAAGAAGGATTTTTACCAATCACAAAATCAATTACCATTCAAGGT
GAACCAGGTGTGACCATCGATGGACTCAAAGAAAAACATGTATTTGGAATTTATCAGGATCATGTCAAAATTTCAGATTT
AAAAGTGATTGGAAGTGGGATCTCTGATTTAGCAGAATATGCAGGAATTTATACAGAAAAAGTAAAACACTGCCACTTCG
AAAATCTAGAGCTTTTGGACAATGTGTACGGCTTTTATTTATCAGAAACCGAAAACTGTACAATCAAAAATAGTTCCTCC
TTTGGAAATGCAGAGAATGAAGTACTCGGTGGAAATGGTATTCACTTATGGTCTTCTAGCAATAATCGTATCTTAGGAAA
TACCTTAGAAAAACATAGAGATGGGATTTACTTAGAATTCTCTGAACACCTAGAAATTTTTAATAATCTTTCGAAAGATA
ACATACGATATGGAATGCATTTTATGTTTTCGAGCGAAAATTCTTTTGCTAAGAATACTTTCAAAAACAATTCAGCAGGT
GTTGCTGTGATGTATAGCAAAAAGATAATCATGGAAGAAAACCAGTTCATTGAAAACTGGGGAGAAAGTTCCAATGGTAT
ATTGTTAAAAGATATTTCAGAAAGTACACTGACCAAAAATACTTTTGAAGGGAATACCATCGCCGTTTTTGCTGATGGGA
TCACTCATATCAACTTTATCGATAATGACTTTATTAATAACGGTTGGGGGATTAAAATTCTAGGAAATACGGATCATAAC
CGAATTCAAAACAATAATTTCATTCGGAATGTTTTTGATATCAGCACCAATACAAAATCAACTACTAATGTATTTTTCCA
AAACTATTGGGACCATTATGAAGGTTATGATTTGAATTTTGATCAATTTGGTGATGTACCACACAAAACAATTCATTTTT
TTGGGTATTGGATCGCCGTGTATCCCTTCTTAATGATCCTATATGAATCGCCCGTCGTTTTATTTTTGCAAGGAATTGAA
AAGGCATTCCCGATTGTCACTCCCATTGAGTTTGAAGACAAACAACCTAGAATGAAGGAACGTATATGA

Upstream 100 bases:

>100_bases
AAAAAAATTCGATCTCCTATGGGCGGAGGATTCGCCGCTTTTAAAAACCATGAAGACGCATTCCCTTTCCAAAATTAATT
CTAATCTCAAAACCAATGTT

Downstream 100 bases:

>100_bases
TAGAAGTTAAAGATCTTACAATCAATTATGGATCAAATATACTCGCCGTAAAAAATGTAAGTTTTACGATTCAATCGGGA
ACTATTGTAGCCATCATTGG

Product: putative copper ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MQKSKQFQKLFHHLFISLLFLLLFLPNSYQARTITVCKGCSLDSLKQAIQIANHGDRIHIKTGIYKEGFLPITKSITIQG
EPGVTIDGLKEKHVFGIYQDHVKISDLKVIGSGISDLAEYAGIYTEKVKHCHFENLELLDNVYGFYLSETENCTIKNSSS
FGNAENEVLGGNGIHLWSSSNNRILGNTLEKHRDGIYLEFSEHLEIFNNLSKDNIRYGMHFMFSSENSFAKNTFKNNSAG
VAVMYSKKIIMEENQFIENWGESSNGILLKDISESTLTKNTFEGNTIAVFADGITHINFIDNDFINNGWGIKILGNTDHN
RIQNNNFIRNVFDISTNTKSTTNVFFQNYWDHYEGYDLNFDQFGDVPHKTIHFFGYWIAVYPFLMILYESPVVLFLQGIE
KAFPIVTPIEFEDKQPRMKERI

Sequences:

>Translated_422_residues
MQKSKQFQKLFHHLFISLLFLLLFLPNSYQARTITVCKGCSLDSLKQAIQIANHGDRIHIKTGIYKEGFLPITKSITIQG
EPGVTIDGLKEKHVFGIYQDHVKISDLKVIGSGISDLAEYAGIYTEKVKHCHFENLELLDNVYGFYLSETENCTIKNSSS
FGNAENEVLGGNGIHLWSSSNNRILGNTLEKHRDGIYLEFSEHLEIFNNLSKDNIRYGMHFMFSSENSFAKNTFKNNSAG
VAVMYSKKIIMEENQFIENWGESSNGILLKDISESTLTKNTFEGNTIAVFADGITHINFIDNDFINNGWGIKILGNTDHN
RIQNNNFIRNVFDISTNTKSTTNVFFQNYWDHYEGYDLNFDQFGDVPHKTIHFFGYWIAVYPFLMILYESPVVLFLQGIE
KAFPIVTPIEFEDKQPRMKERI
>Mature_422_residues
MQKSKQFQKLFHHLFISLLFLLLFLPNSYQARTITVCKGCSLDSLKQAIQIANHGDRIHIKTGIYKEGFLPITKSITIQG
EPGVTIDGLKEKHVFGIYQDHVKISDLKVIGSGISDLAEYAGIYTEKVKHCHFENLELLDNVYGFYLSETENCTIKNSSS
FGNAENEVLGGNGIHLWSSSNNRILGNTLEKHRDGIYLEFSEHLEIFNNLSKDNIRYGMHFMFSSENSFAKNTFKNNSAG
VAVMYSKKIIMEENQFIENWGESSNGILLKDISESTLTKNTFEGNTIAVFADGITHINFIDNDFINNGWGIKILGNTDHN
RIQNNNFIRNVFDISTNTKSTTNVFFQNYWDHYEGYDLNFDQFGDVPHKTIHFFGYWIAVYPFLMILYESPVVLFLQGIE
KAFPIVTPIEFEDKQPRMKERI

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 48364; Mature: 48364

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSKQFQKLFHHLFISLLFLLLFLPNSYQARTITVCKGCSLDSLKQAIQIANHGDRIHI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEE
KTGIYKEGFLPITKSITIQGEPGVTIDGLKEKHVFGIYQDHVKISDLKVIGSGISDLAEY
EECCCCCCCEEEEEEEEEECCCCCEECCCCCCEEEEEEECCEEEEHHEEECCCHHHHHHH
AGIYTEKVKHCHFENLELLDNVYGFYLSETENCTIKNSSSFGNAENEVLGGNGIHLWSSS
HHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCEECCCCEEEEECC
NNRILGNTLEKHRDGIYLEFSEHLEIFNNLSKDNIRYGMHFMFSSENSFAKNTFKNNSAG
CCEEECCHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCC
VAVMYSKKIIMEENQFIENWGESSNGILLKDISESTLTKNTFEGNTIAVFADGITHINFI
EEEEEECEEEECCHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCEEEEEE
DNDFINNGWGIKILGNTDHNRIQNNNFIRNVFDISTNTKSTTNVFFQNYWDHYEGYDLNF
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCH
DQFGDVPHKTIHFFGYWIAVYPFLMILYESPVVLFLQGIEKAFPIVTPIEFEDKQPRMKE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RI
CC
>Mature Secondary Structure
MQKSKQFQKLFHHLFISLLFLLLFLPNSYQARTITVCKGCSLDSLKQAIQIANHGDRIHI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEE
KTGIYKEGFLPITKSITIQGEPGVTIDGLKEKHVFGIYQDHVKISDLKVIGSGISDLAEY
EECCCCCCCEEEEEEEEEECCCCCEECCCCCCEEEEEEECCEEEEHHEEECCCHHHHHHH
AGIYTEKVKHCHFENLELLDNVYGFYLSETENCTIKNSSSFGNAENEVLGGNGIHLWSSS
HHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCEECCCCEEEEECC
NNRILGNTLEKHRDGIYLEFSEHLEIFNNLSKDNIRYGMHFMFSSENSFAKNTFKNNSAG
CCEEECCHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCC
VAVMYSKKIIMEENQFIENWGESSNGILLKDISESTLTKNTFEGNTIAVFADGITHINFI
EEEEEECEEEECCHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCEEEEEE
DNDFINNGWGIKILGNTDHNRIQNNNFIRNVFDISTNTKSTTNVFFQNYWDHYEGYDLNF
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCH
DQFGDVPHKTIHFFGYWIAVYPFLMILYESPVVLFLQGIEKAFPIVTPIEFEDKQPRMKE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]