| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219794
Identifier: 183219794
GI number: 183219794
Start: 373532
End: 374500
Strand: Reverse
Name: 183219794
Synonym: LEPBI_I0371
Alternate gene names: NA
Gene position: 374500-373532 (Counterclockwise)
Preceding gene: 183219795
Following gene: 183219793
Centisome position: 10.4
GC content: 29.82
Gene sequence:
>969_bases ATGGATACAATTTCATTGAAAAATTTTAATCAGGCATTCCTACCGACATTTCAAATTCGATTTTCAAAATTACAAAGGAT AGTGAGAATATCTGCTCTCTTATTTTTAAATCTTAATTGTTTTTATTCAATAAAAACCTATACCAATGCCTTTCCTTATC CGAAAGACAAAAATGTTGCTATTACTGAAATTGAAAAATTTGAAATCGATACAAATGACTTAATCAAAGTCCAAATCAAA GATCATACAAAGTGCATTCAAATCGGTTACGGATCATACTACATTCATTACAAATTGAATTTACCAAATTATGGCTGTAA CTCCTTCAATCAAACAAACGCAAGCCTAGGAACACTAAGCTTTCATGAGATTTCAAATTCGGCAATCCTTCACAATGACA AAATTATTTTAGATTTTTCATCACTACCAAAAGATAAATTTTTTTTAGTCAATCCTAGTATCGAATGGGGGATATTTCAT CCGAAAAGTTATGGTTATGTAGCTGATCCAAAGATAGATTCTCCTTTTATCAATGCTTTTATCACAAATGATTATAAATA TGTTTTAATCAAAAAAAAGGAAAAAACATATGTATTTAACACAATTGATGATAAGGGCTTACTTAGAAGACTTGAAAAAA GGGATAGAGAAGATAAAGAAACCATAGAATTCAAAGAAAACAAAATCATAAAAGCTTATAAAAATAAACTACAGCCACTA AAATTTATTTCCATTAAAGGGCTTGGAATGATTTCAATCAGGGATCGTAAGAAACGATTATTTTATCAGCTGAATCACAC TGAAAATTTATACGATATTCAATTGAGCCTTAGCAAGGAAGAGTCCCAAGATACAAATTATCAGTATATCCCACTTCTCC CATTTAGCCTGATTGCTGATTTATTGATTAGTCCTATTGTTGTTCCCGTTGTGGCTTTTTATAACACAGTCTATTTGCTT AGAAAATGA
Upstream 100 bases:
>100_bases TTGAACAGACGAAATTTCCATTGCATAAAGATTCGAAATCTCAAATGACTTTCTCATTAGTTTTACGTTTGAATCGAGTC AAACATTTTAAAAAAATAGG
Downstream 100 bases:
>100_bases ACCAAAATTCTTTTTTCCATTGATTATCTCAAGATTTCCAATTGACACTCTATTTTCGATATCGTATTTTGATTTCGAAT GAGAATCAATGAATTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MDTISLKNFNQAFLPTFQIRFSKLQRIVRISALLFLNLNCFYSIKTYTNAFPYPKDKNVAITEIEKFEIDTNDLIKVQIK DHTKCIQIGYGSYYIHYKLNLPNYGCNSFNQTNASLGTLSFHEISNSAILHNDKIILDFSSLPKDKFFLVNPSIEWGIFH PKSYGYVADPKIDSPFINAFITNDYKYVLIKKKEKTYVFNTIDDKGLLRRLEKRDREDKETIEFKENKIIKAYKNKLQPL KFISIKGLGMISIRDRKKRLFYQLNHTENLYDIQLSLSKEESQDTNYQYIPLLPFSLIADLLISPIVVPVVAFYNTVYLL RK
Sequences:
>Translated_322_residues MDTISLKNFNQAFLPTFQIRFSKLQRIVRISALLFLNLNCFYSIKTYTNAFPYPKDKNVAITEIEKFEIDTNDLIKVQIK DHTKCIQIGYGSYYIHYKLNLPNYGCNSFNQTNASLGTLSFHEISNSAILHNDKIILDFSSLPKDKFFLVNPSIEWGIFH PKSYGYVADPKIDSPFINAFITNDYKYVLIKKKEKTYVFNTIDDKGLLRRLEKRDREDKETIEFKENKIIKAYKNKLQPL KFISIKGLGMISIRDRKKRLFYQLNHTENLYDIQLSLSKEESQDTNYQYIPLLPFSLIADLLISPIVVPVVAFYNTVYLL RK >Mature_322_residues MDTISLKNFNQAFLPTFQIRFSKLQRIVRISALLFLNLNCFYSIKTYTNAFPYPKDKNVAITEIEKFEIDTNDLIKVQIK DHTKCIQIGYGSYYIHYKLNLPNYGCNSFNQTNASLGTLSFHEISNSAILHNDKIILDFSSLPKDKFFLVNPSIEWGIFH PKSYGYVADPKIDSPFINAFITNDYKYVLIKKKEKTYVFNTIDDKGLLRRLEKRDREDKETIEFKENKIIKAYKNKLQPL KFISIKGLGMISIRDRKKRLFYQLNHTENLYDIQLSLSKEESQDTNYQYIPLLPFSLIADLLISPIVVPVVAFYNTVYLL RK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37731; Mature: 37731
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTISLKNFNQAFLPTFQIRFSKLQRIVRISALLFLNLNCFYSIKTYTNAFPYPKDKNVA CCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEECCCCCCCCCCCCEE ITEIEKFEIDTNDLIKVQIKDHTKCIQIGYGSYYIHYKLNLPNYGCNSFNQTNASLGTLS EEEEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEE FHEISNSAILHNDKIILDFSSLPKDKFFLVNPSIEWGIFHPKSYGYVADPKIDSPFINAF EECCCCCEEEECCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCEEEEE ITNDYKYVLIKKKEKTYVFNTIDDKGLLRRLEKRDREDKETIEFKENKIIKAYKNKLQPL EECCEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHCCCCE KFISIKGLGMISIRDRKKRLFYQLNHTENLYDIQLSLSKEESQDTNYQYIPLLPFSLIAD EEEEECCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHH LLISPIVVPVVAFYNTVYLLRK HHHHHHHHHHHHHHCEEEEEEC >Mature Secondary Structure MDTISLKNFNQAFLPTFQIRFSKLQRIVRISALLFLNLNCFYSIKTYTNAFPYPKDKNVA CCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEECCCCCCCCCCCCEE ITEIEKFEIDTNDLIKVQIKDHTKCIQIGYGSYYIHYKLNLPNYGCNSFNQTNASLGTLS EEEEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEEE FHEISNSAILHNDKIILDFSSLPKDKFFLVNPSIEWGIFHPKSYGYVADPKIDSPFINAF EECCCCCEEEECCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCEEECCCCCCCEEEEE ITNDYKYVLIKKKEKTYVFNTIDDKGLLRRLEKRDREDKETIEFKENKIIKAYKNKLQPL EECCEEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHCCCCE KFISIKGLGMISIRDRKKRLFYQLNHTENLYDIQLSLSKEESQDTNYQYIPLLPFSLIAD EEEEECCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHH LLISPIVVPVVAFYNTVYLLRK HHHHHHHHHHHHHHCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA