| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219744
Identifier: 183219744
GI number: 183219744
Start: 320351
End: 320866
Strand: Direct
Name: 183219744
Synonym: LEPBI_I0320
Alternate gene names: NA
Gene position: 320351-320866 (Clockwise)
Preceding gene: 183219740
Following gene: 183219745
Centisome position: 8.9
GC content: 39.34
Gene sequence:
>516_bases ATGAGTAAGATTGTGGTGGTTTTCTTTTTGTTCATTGGCATTGTATTTATGGATTTTGCCTGTACGAAAAAATCCAAAGA AGAATCCAATTCAGAACTTTTAAGTACGTTACTCTCTCAAGGGAGCCCCATCCAATCTGCTTGTCAAAGATTTATTCTCA CAGAATCAAATTGTGTGGCAGTCGCTGATGTGAGTGCGAATGTTTGTCCAGGTCTCATCTCAAGATTAAAAGCGCAAATC CTTCCACAAGAATTGAGTACAGACGCCGTTGCCGTTTTGTATTTTGATTGTTTTTCCAAAATCAACTTAACCTATAATCT AACAAAAGCATGTAACCAAAATTCATTTGCTTCCAATTCAGAATATAGAAGAGTCCAACGTACAGGCACTTCGAGTGCTG AAACTTCCTGGCAAGAAGCCATGAACCAATGTGGTTCATTAGAGAATTCCGTTCCACCCGTTGATTCGGGACTTCAGGAC ACTGATACCATTCTTGGATCAGATCCTTTCCAATGA
Upstream 100 bases:
>100_bases CGATCGGGAATCGTAGGATGATTCTTTGGTGTCTTCCTTGTTTTTTTTCAGAAAAAGGATATAGACAAGACCACCAAGTA AGAAGGAGAGTAGAATCGAG
Downstream 100 bases:
>100_bases ATGTTATAAGGAGATAAAAATGTCACTCGTATCCAAAGACCAATTGGTCCAAAAATTAAAACCGATTTACCTTCCTCATG AAATTGAAGAACGAATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSKIVVVFFLFIGIVFMDFACTKKSKEESNSELLSTLLSQGSPIQSACQRFILTESNCVAVADVSANVCPGLISRLKAQI LPQELSTDAVAVLYFDCFSKINLTYNLTKACNQNSFASNSEYRRVQRTGTSSAETSWQEAMNQCGSLENSVPPVDSGLQD TDTILGSDPFQ
Sequences:
>Translated_171_residues MSKIVVVFFLFIGIVFMDFACTKKSKEESNSELLSTLLSQGSPIQSACQRFILTESNCVAVADVSANVCPGLISRLKAQI LPQELSTDAVAVLYFDCFSKINLTYNLTKACNQNSFASNSEYRRVQRTGTSSAETSWQEAMNQCGSLENSVPPVDSGLQD TDTILGSDPFQ >Mature_170_residues SKIVVVFFLFIGIVFMDFACTKKSKEESNSELLSTLLSQGSPIQSACQRFILTESNCVAVADVSANVCPGLISRLKAQIL PQELSTDAVAVLYFDCFSKINLTYNLTKACNQNSFASNSEYRRVQRTGTSSAETSWQEAMNQCGSLENSVPPVDSGLQDT DTILGSDPFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18660; Mature: 18529
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIVVVFFLFIGIVFMDFACTKKSKEESNSELLSTLLSQGSPIQSACQRFILTESNCVA CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE VADVSANVCPGLISRLKAQILPQELSTDAVAVLYFDCFSKINLTYNLTKACNQNSFASNS EECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCCCCH EYRRVQRTGTSSAETSWQEAMNQCGSLENSVPPVDSGLQDTDTILGSDPFQ HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure SKIVVVFFLFIGIVFMDFACTKKSKEESNSELLSTLLSQGSPIQSACQRFILTESNCVA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEE VADVSANVCPGLISRLKAQILPQELSTDAVAVLYFDCFSKINLTYNLTKACNQNSFASNS EECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCCCCH EYRRVQRTGTSSAETSWQEAMNQCGSLENSVPPVDSGLQDTDTILGSDPFQ HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA