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The map label for this gene is ydiF [H]

Identifier: 183219698

GI number: 183219698

Start: 266841

End: 268784

Strand: Reverse

Name: ydiF [H]

Synonym: LEPBI_I0274

Alternate gene names: 183219698

Gene position: 268784-266841 (Counterclockwise)

Preceding gene: 183219699

Following gene: 183219697

Centisome position: 7.47

GC content: 41.77

Gene sequence:

>1944_bases
TTGATCCAATTCATCCAAATCCACCAACACTTCGGCCCCAAAGTCCTCTTTGAGGGATTCAGCTGGCACATCAAACCAGG
TTGCCGCGTGGCGCTTGTAGGTCCCAATGGTTCTGGAAAAACGACTCTCTTCCAAATGGCCGCGGGGAAAATCAAACCTG
AATCCGGGGAAGTGATTCGTTCCAAACACACGATCCTTTCCCTTTTCCAACAAATCCCTGAATTCAATCCCGATACGTCA
GTCATCGAAACCGTCCTCGACGAAAACAAATTGTATGCCGAGTACGATGCCAAACGAAAAGAAATTGAATCCAAATTTGA
AACCATAGACCACGAAGATCCGGCATTTGAGACATTACTCCACGAACAGAGTGAATTGGAAGAATTTGCCCACTTACACG
ACTTACATGGGTTAGAGGCTCGGGCCAAAAAAATTCTATCTGGACTTGGCTTTTCCACGGCTGATTTCGTTCGCAAAACC
AAAGAATTTTCTCCAGGTTACCACCACCGCATTGGACTTGCGATTGCTCTACTCAATCCGCATAATTTACTACTTTTAGA
TGAACCAACCAATCACTTGGATGACAAAACCAAATCTTGGTTAGCTGACTTTTTGGTTTCCCAAAACCAAGCTTTTGTCC
TTGTCACTCACGATCCGGAATTTTTAAACCAAACTGTAGATACGATCATTGAAATCAATCCCCATGGGACGTTTGAATTC
CAAGGAAGTTTGGAAGAATTTTTTGAAGCCAAAAATGAAATCCAAGAGAAACTAAAAGTCCAATTTGAAAAAGAAGAATC
GTATTTAAAATCAAGAATGGAATGGGTCGAACGATTCCGTGCCCAAGCAACCAAAGCAAGACAAGTACAATCGGTCATCA
AACGATTGGAGAAACGGGACCGGGTTGACAATCCTGAAGAAAGTTTTTGGAACCAAAAACCAGACTACCAATTCCAATTT
GTCCCTTCGAGTAATATCATCCTTCGACTAGAACACGCATCCTTTTCCTATCCTGACAGAAACACAGGTGAAAAAAAATC
CATTTTTGAAAATGCAGAGATCGAAATTTCGGCTGGCGACAAAGTGGCACTCGTTGGTCCCAATGGGGCTGGAAAATCAA
CTCTTATGCGTTGTTTGTTAGAACAACACAAACTGGATACTGGAAAATTATACTATGGGCCAAAAACCAAACTTGGTTAT
TTTTCCCAAACACACGGGGAAGATTTGGATGAATCCTTAAATCTTGTGGAAACGGTTTTAAAAAAATACCCAGAACTGAA
TGAAGAAAAAGCAAGGACTCTCCTTGGTCATTTTGCCTTTCCTGGCGATGGAGTGTTTAAATCCGTCAAACACTTATCAG
GTGGGGAACAGAGTAGACTCCGACTTGCCCTACTTGTCAACCACCCTTCCAATTGTTTGTTCCTCGACGAACCAACAAAC
CACCTCGACATCGTGATCCGCGAAGCGATCAAACGTTCCCTCATCGATTTTCCAGGAAGCCTTCTCATCATCAGCCACGA
CCCCGATTTTATGAAGGGACTTTGTAACCGCACCTTCCAACTCTCTGGTGGCGAATTAAAAAACCTCAATTGTAGTTTTG
ATGATTACCTCAAATTCCACAAAGAAGATGAATTAGGGACTAACGCGAAGGACCAAACGTCCCAAAAGCCAAAATCGGAA
GAAAAAAAGCCCAATCCCCAAGCGAGTAAAAACAAACGGAAAAAATTAGAAAAAGAAATTTCCGATTTGGAAGTCCAAAT
AGAAAGACTGGAAAAAAATAAAAAGGACAAAGAGGAACTTTTACAGGACCCTGAGTTCTTTAAAAACAGAAGTTTTCAGT
TGGAAATGGACACTTATAACGATATTAAAAGAGAAATCTCAATCCTGACCAAACGTTGGGAAGAAGCGACAATAGAACTA
GAGGAAATGGGCGGAGTTACATAA

Upstream 100 bases:

>100_bases
TATGTAAAACACCTTCGCGAAAGAAAGGCGGAACTCCTAGCCAAGAAATAAGGTTAGTCCCTCCTAATTTGCCCGCCGAA
ACGGCGGGTTTTCACAGCCC

Downstream 100 bases:

>100_bases
TGGTACCGGAAATCGATGTAGTCAGTTTAAAAAAACGTCTGGATGCAAGAGCAGAAGGAAAGGATGATTTTTTTGTTTTG
GATGTACGCAATCCAAACGA

Product: heme ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MIQFIQIHQHFGPKVLFEGFSWHIKPGCRVALVGPNGSGKTTLFQMAAGKIKPESGEVIRSKHTILSLFQQIPEFNPDTS
VIETVLDENKLYAEYDAKRKEIESKFETIDHEDPAFETLLHEQSELEEFAHLHDLHGLEARAKKILSGLGFSTADFVRKT
KEFSPGYHHRIGLAIALLNPHNLLLLDEPTNHLDDKTKSWLADFLVSQNQAFVLVTHDPEFLNQTVDTIIEINPHGTFEF
QGSLEEFFEAKNEIQEKLKVQFEKEESYLKSRMEWVERFRAQATKARQVQSVIKRLEKRDRVDNPEESFWNQKPDYQFQF
VPSSNIILRLEHASFSYPDRNTGEKKSIFENAEIEISAGDKVALVGPNGAGKSTLMRCLLEQHKLDTGKLYYGPKTKLGY
FSQTHGEDLDESLNLVETVLKKYPELNEEKARTLLGHFAFPGDGVFKSVKHLSGGEQSRLRLALLVNHPSNCLFLDEPTN
HLDIVIREAIKRSLIDFPGSLLIISHDPDFMKGLCNRTFQLSGGELKNLNCSFDDYLKFHKEDELGTNAKDQTSQKPKSE
EKKPNPQASKNKRKKLEKEISDLEVQIERLEKNKKDKEELLQDPEFFKNRSFQLEMDTYNDIKREISILTKRWEEATIEL
EEMGGVT

Sequences:

>Translated_647_residues
MIQFIQIHQHFGPKVLFEGFSWHIKPGCRVALVGPNGSGKTTLFQMAAGKIKPESGEVIRSKHTILSLFQQIPEFNPDTS
VIETVLDENKLYAEYDAKRKEIESKFETIDHEDPAFETLLHEQSELEEFAHLHDLHGLEARAKKILSGLGFSTADFVRKT
KEFSPGYHHRIGLAIALLNPHNLLLLDEPTNHLDDKTKSWLADFLVSQNQAFVLVTHDPEFLNQTVDTIIEINPHGTFEF
QGSLEEFFEAKNEIQEKLKVQFEKEESYLKSRMEWVERFRAQATKARQVQSVIKRLEKRDRVDNPEESFWNQKPDYQFQF
VPSSNIILRLEHASFSYPDRNTGEKKSIFENAEIEISAGDKVALVGPNGAGKSTLMRCLLEQHKLDTGKLYYGPKTKLGY
FSQTHGEDLDESLNLVETVLKKYPELNEEKARTLLGHFAFPGDGVFKSVKHLSGGEQSRLRLALLVNHPSNCLFLDEPTN
HLDIVIREAIKRSLIDFPGSLLIISHDPDFMKGLCNRTFQLSGGELKNLNCSFDDYLKFHKEDELGTNAKDQTSQKPKSE
EKKPNPQASKNKRKKLEKEISDLEVQIERLEKNKKDKEELLQDPEFFKNRSFQLEMDTYNDIKREISILTKRWEEATIEL
EEMGGVT
>Mature_647_residues
MIQFIQIHQHFGPKVLFEGFSWHIKPGCRVALVGPNGSGKTTLFQMAAGKIKPESGEVIRSKHTILSLFQQIPEFNPDTS
VIETVLDENKLYAEYDAKRKEIESKFETIDHEDPAFETLLHEQSELEEFAHLHDLHGLEARAKKILSGLGFSTADFVRKT
KEFSPGYHHRIGLAIALLNPHNLLLLDEPTNHLDDKTKSWLADFLVSQNQAFVLVTHDPEFLNQTVDTIIEINPHGTFEF
QGSLEEFFEAKNEIQEKLKVQFEKEESYLKSRMEWVERFRAQATKARQVQSVIKRLEKRDRVDNPEESFWNQKPDYQFQF
VPSSNIILRLEHASFSYPDRNTGEKKSIFENAEIEISAGDKVALVGPNGAGKSTLMRCLLEQHKLDTGKLYYGPKTKLGY
FSQTHGEDLDESLNLVETVLKKYPELNEEKARTLLGHFAFPGDGVFKSVKHLSGGEQSRLRLALLVNHPSNCLFLDEPTN
HLDIVIREAIKRSLIDFPGSLLIISHDPDFMKGLCNRTFQLSGGELKNLNCSFDDYLKFHKEDELGTNAKDQTSQKPKSE
EKKPNPQASKNKRKKLEKEISDLEVQIERLEKNKKDKEELLQDPEFFKNRSFQLEMDTYNDIKREISILTKRWEEATIEL
EEMGGVT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=32.0297951582868, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=32.6171875, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=32.6171875, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI10947135, Length=536, Percent_Identity=28.1716417910448, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI69354671, Length=536, Percent_Identity=28.1716417910448, Blast_Score=170, Evalue=4e-42,
Organism=Escherichia coli, GI1789751, Length=673, Percent_Identity=30.9063893016345, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=28.7037037037037, Blast_Score=232, Evalue=6e-62,
Organism=Escherichia coli, GI2367384, Length=563, Percent_Identity=29.3072824156306, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1787182, Length=524, Percent_Identity=29.3893129770992, Blast_Score=204, Evalue=2e-53,
Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=32.6424870466321, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=25, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=31.2384473197782, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17555318, Length=488, Percent_Identity=30.7377049180328, Blast_Score=208, Evalue=9e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=549, Percent_Identity=28.4153005464481, Blast_Score=186, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6321121, Length=535, Percent_Identity=30.4672897196262, Blast_Score=233, Evalue=7e-62,
Organism=Saccharomyces cerevisiae, GI6320874, Length=527, Percent_Identity=28.6527514231499, Blast_Score=194, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6324314, Length=393, Percent_Identity=23.9185750636132, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6325030, Length=394, Percent_Identity=24.3654822335025, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=31.8867924528302, Blast_Score=247, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24641342, Length=538, Percent_Identity=29.9256505576208, Blast_Score=208, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24642252, Length=505, Percent_Identity=30.4950495049505, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI18859989, Length=505, Percent_Identity=30.4950495049505, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI85725262, Length=181, Percent_Identity=27.6243093922652, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74343; Mature: 74343

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQFIQIHQHFGPKVLFEGFSWHIKPGCRVALVGPNGSGKTTLFQMAAGKIKPESGEVIR
CCEEEEEHHHCCCCEEECCCEEEECCCCEEEEECCCCCCCCEEEEHHCCCCCCCCCCHHH
SKHTILSLFQQIPEFNPDTSVIETVLDENKLYAEYDAKRKEIESKFETIDHEDPAFETLL
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH
HEQSELEEFAHLHDLHGLEARAKKILSGLGFSTADFVRKTKEFSPGYHHRIGLAIALLNP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECC
HNLLLLDEPTNHLDDKTKSWLADFLVSQNQAFVLVTHDPEFLNQTVDTIIEINPHGTFEF
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHEEEECCCCCEEE
QGSLEEFFEAKNEIQEKLKVQFEKEESYLKSRMEWVERFRAQATKARQVQSVIKRLEKRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVDNPEESFWNQKPDYQFQFVPSSNIILRLEHASFSYPDRNTGEKKSIFENAEIEISAGD
CCCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCC
KVALVGPNGAGKSTLMRCLLEQHKLDTGKLYYGPKTKLGYFSQTHGEDLDESLNLVETVL
EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
KKYPELNEEKARTLLGHFAFPGDGVFKSVKHLSGGEQSRLRLALLVNHPSNCLFLDEPTN
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCC
HLDIVIREAIKRSLIDFPGSLLIISHDPDFMKGLCNRTFQLSGGELKNLNCSFDDYLKFH
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHC
KEDELGTNAKDQTSQKPKSEEKKPNPQASKNKRKKLEKEISDLEVQIERLEKNKKDKEEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LQDPEFFKNRSFQLEMDTYNDIKREISILTKRWEEATIELEEMGGVT
HCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC
>Mature Secondary Structure
MIQFIQIHQHFGPKVLFEGFSWHIKPGCRVALVGPNGSGKTTLFQMAAGKIKPESGEVIR
CCEEEEEHHHCCCCEEECCCEEEECCCCEEEEECCCCCCCCEEEEHHCCCCCCCCCCHHH
SKHTILSLFQQIPEFNPDTSVIETVLDENKLYAEYDAKRKEIESKFETIDHEDPAFETLL
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH
HEQSELEEFAHLHDLHGLEARAKKILSGLGFSTADFVRKTKEFSPGYHHRIGLAIALLNP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECC
HNLLLLDEPTNHLDDKTKSWLADFLVSQNQAFVLVTHDPEFLNQTVDTIIEINPHGTFEF
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHEEEECCCCCEEE
QGSLEEFFEAKNEIQEKLKVQFEKEESYLKSRMEWVERFRAQATKARQVQSVIKRLEKRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVDNPEESFWNQKPDYQFQFVPSSNIILRLEHASFSYPDRNTGEKKSIFENAEIEISAGD
CCCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCC
KVALVGPNGAGKSTLMRCLLEQHKLDTGKLYYGPKTKLGYFSQTHGEDLDESLNLVETVL
EEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
KKYPELNEEKARTLLGHFAFPGDGVFKSVKHLSGGEQSRLRLALLVNHPSNCLFLDEPTN
HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCC
HLDIVIREAIKRSLIDFPGSLLIISHDPDFMKGLCNRTFQLSGGELKNLNCSFDDYLKFH
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHC
KEDELGTNAKDQTSQKPKSEEKKPNPQASKNKRKKLEKEISDLEVQIERLEKNKKDKEEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LQDPEFFKNRSFQLEMDTYNDIKREISILTKRWEEATIELEEMGGVT
HCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]