| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is thrC [H]
Identifier: 183219684
GI number: 183219684
Start: 252066
End: 253415
Strand: Direct
Name: thrC [H]
Synonym: LEPBI_I0259
Alternate gene names: 183219684
Gene position: 252066-253415 (Clockwise)
Preceding gene: 183219680
Following gene: 183219685
Centisome position: 7.0
GC content: 45.19
Gene sequence:
>1350_bases ATGTCACTTACAAAATATCAATTCCGAGCACAGTTTCGCTGTACCAATGACTCTTGTCGCAAAACGTACCCACTCCACCA AGTGATTTATTCCTGTTCCAGTTGTGGAGAACTTCTGAATGTGGAACATGATTTAGACAGCCTCAAAAAAATCCCAGCGG AAGAGTGGAAGTCTACGTTCGACTCTCGTTTTCGTTCGAGCCAATTTCCCAATGCTTCTGGCGTTTGGGGTAAAAAAGAA TGGGTGCTTCCCGAAATCCAAGATCAAAACATCATCACATCCGGGGAAGGAACGACACATTTGTATGATGCCTCTCGTTT TGCCAAAGACTTGGGACTGGGGAGCCTCCATATCAAACAGTGCGGAGTTTCCCACACAGGTTCCTTCAAAGATTTAGGCA TGACAGTTCTTGTCAGCCAGGTAAACCAAATGATCGCCGACGGTGTTCCGATCAAAGCAGTGGCATGTGCATCCACTGGT GATACCTCAGCTGCTTTAGCTTCTTATGCGGCAAAAGCGGGGATCCCTGCCATCATCTTACTTCCAGCTAACAAAGTTTC AACGGCACAACTCATCCAACCTGTATCCAACGGAGCCATTGTTCTTGCATTAGAAACTGACTTTGATGGTTGTATGGCCG TTGTGAAAGAACTCACACAAGAAAAGTCCCTTTACTTAGCAAATTCAATGAATTCCCTTCGCATTGAAGGGCAAAAATCC ATTTCAGTTGAAATTACCCAACAACTTGGTTGGAAGGTTCCCGATTGGGTTGTGATCCCTGGTGGGAATTTAGGGAATGT GTCTGCTCTCGGAATGGGATTTGAAATGATGTATGAGTTAGGACTCATTGGTAAACTCCCAAGGATTTTGTTGGCACAAG CAAAAAATGCAAGTCCTCTCTACGAGTCGTATAAGAAAGGTTTTGCGGAGTTCTCTCCTGTGACGGCTGAAAAAACGTTA GCCTCTGCCATCCAAATTGGAGACCCAGTCTCTGTCAAAAAAGCGATCCGTGTTCTCAAAAAATTCGACGGGATTGTGGA AGTGGCGACAGAAGAAGAGTTAGCCAATGCGGCAGCAAAGGGAGATTTGTACGGACTTTATAATGACCCACACACTGGGG TGGCACTTGCGGCTCTTTTCAAATCCATCCAAAAAGGAACAGTGGGAGCGGGTGAGTCGGTGGTCGTGATTTCGACTGCC AACGGACTCAAATTCACAGAATTCAAACTTGCCTTCCACGAAGGAAAAATTCCTCAAGTGGATGAGGCTCTGAGGAATGT AATTTTGCCTTGTAAGCCGACACTTTCTGGTGTGATGGAAATCCTAGGTAAACATTTGAAGAAAACATAA
Upstream 100 bases:
>100_bases TCCATATCCATCAAAAAACGATAAAAATCATTCGTGCATTTTTCCCCTTTCCAAAGAATGGAAAAGGAAGTTTCCGTAAA TCTGAAGCCTAGAGAAGTCT
Downstream 100 bases:
>100_bases ATCGCTAGACAAATCTCGAAATCACTGGCAAATTTTTTAAGTTTACCAGTATGTCCCACGAGATTTCTCTCAGTCCAGAT TTTTGTCATACAGTCGACGA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSLTKYQFRAQFRCTNDSCRKTYPLHQVIYSCSSCGELLNVEHDLDSLKKIPAEEWKSTFDSRFRSSQFPNASGVWGKKE WVLPEIQDQNIITSGEGTTHLYDASRFAKDLGLGSLHIKQCGVSHTGSFKDLGMTVLVSQVNQMIADGVPIKAVACASTG DTSAALASYAAKAGIPAIILLPANKVSTAQLIQPVSNGAIVLALETDFDGCMAVVKELTQEKSLYLANSMNSLRIEGQKS ISVEITQQLGWKVPDWVVIPGGNLGNVSALGMGFEMMYELGLIGKLPRILLAQAKNASPLYESYKKGFAEFSPVTAEKTL ASAIQIGDPVSVKKAIRVLKKFDGIVEVATEEELANAAAKGDLYGLYNDPHTGVALAALFKSIQKGTVGAGESVVVISTA NGLKFTEFKLAFHEGKIPQVDEALRNVILPCKPTLSGVMEILGKHLKKT
Sequences:
>Translated_449_residues MSLTKYQFRAQFRCTNDSCRKTYPLHQVIYSCSSCGELLNVEHDLDSLKKIPAEEWKSTFDSRFRSSQFPNASGVWGKKE WVLPEIQDQNIITSGEGTTHLYDASRFAKDLGLGSLHIKQCGVSHTGSFKDLGMTVLVSQVNQMIADGVPIKAVACASTG DTSAALASYAAKAGIPAIILLPANKVSTAQLIQPVSNGAIVLALETDFDGCMAVVKELTQEKSLYLANSMNSLRIEGQKS ISVEITQQLGWKVPDWVVIPGGNLGNVSALGMGFEMMYELGLIGKLPRILLAQAKNASPLYESYKKGFAEFSPVTAEKTL ASAIQIGDPVSVKKAIRVLKKFDGIVEVATEEELANAAAKGDLYGLYNDPHTGVALAALFKSIQKGTVGAGESVVVISTA NGLKFTEFKLAFHEGKIPQVDEALRNVILPCKPTLSGVMEILGKHLKKT >Mature_448_residues SLTKYQFRAQFRCTNDSCRKTYPLHQVIYSCSSCGELLNVEHDLDSLKKIPAEEWKSTFDSRFRSSQFPNASGVWGKKEW VLPEIQDQNIITSGEGTTHLYDASRFAKDLGLGSLHIKQCGVSHTGSFKDLGMTVLVSQVNQMIADGVPIKAVACASTGD TSAALASYAAKAGIPAIILLPANKVSTAQLIQPVSNGAIVLALETDFDGCMAVVKELTQEKSLYLANSMNSLRIEGQKSI SVEITQQLGWKVPDWVVIPGGNLGNVSALGMGFEMMYELGLIGKLPRILLAQAKNASPLYESYKKGFAEFSPVTAEKTLA SAIQIGDPVSVKKAIRVLKKFDGIVEVATEEELANAAAKGDLYGLYNDPHTGVALAALFKSIQKGTVGAGESVVVISTAN GLKFTEFKLAFHEGKIPQVDEALRNVILPCKPTLSGVMEILGKHLKKT
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786185, Length=306, Percent_Identity=24.8366013071895, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 48375; Mature: 48244
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTKYQFRAQFRCTNDSCRKTYPLHQVIYSCSSCGELLNVEHDLDSLKKIPAEEWKSTF CCCCCEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH DSRFRSSQFPNASGVWGKKEWVLPEIQDQNIITSGEGTTHLYDASRFAKDLGLGSLHIKQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHCCCCCEEHHH CGVSHTGSFKDLGMTVLVSQVNQMIADGVPIKAVACASTGDTSAALASYAAKAGIPAIIL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEE LPANKVSTAQLIQPVSNGAIVLALETDFDGCMAVVKELTQEKSLYLANSMNSLRIEGQKS ECCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCCEEECCCCC ISVEITQQLGWKVPDWVVIPGGNLGNVSALGMGFEMMYELGLIGKLPRILLAQAKNASPL EEEEEHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YESYKKGFAEFSPVTAEKTLASAIQIGDPVSVKKAIRVLKKFDGIVEVATEEELANAAAK HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHC GDLYGLYNDPHTGVALAALFKSIQKGTVGAGESVVVISTANGLKFTEFKLAFHEGKIPQV CCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCHH DEALRNVILPCKPTLSGVMEILGKHLKKT HHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTKYQFRAQFRCTNDSCRKTYPLHQVIYSCSSCGELLNVEHDLDSLKKIPAEEWKSTF CCCCEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH DSRFRSSQFPNASGVWGKKEWVLPEIQDQNIITSGEGTTHLYDASRFAKDLGLGSLHIKQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHCCCCCEEHHH CGVSHTGSFKDLGMTVLVSQVNQMIADGVPIKAVACASTGDTSAALASYAAKAGIPAIIL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEE LPANKVSTAQLIQPVSNGAIVLALETDFDGCMAVVKELTQEKSLYLANSMNSLRIEGQKS ECCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCCEEECCCCC ISVEITQQLGWKVPDWVVIPGGNLGNVSALGMGFEMMYELGLIGKLPRILLAQAKNASPL EEEEEHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH YESYKKGFAEFSPVTAEKTLASAIQIGDPVSVKKAIRVLKKFDGIVEVATEEELANAAAK HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHC GDLYGLYNDPHTGVALAALFKSIQKGTVGAGESVVVISTANGLKFTEFKLAFHEGKIPQV CCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCHH DEALRNVILPCKPTLSGVMEILGKHLKKT HHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]