| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219673
Identifier: 183219673
GI number: 183219673
Start: 238380
End: 238853
Strand: Reverse
Name: 183219673
Synonym: LEPBI_I0248
Alternate gene names: NA
Gene position: 238853-238380 (Counterclockwise)
Preceding gene: 183219674
Following gene: 183219672
Centisome position: 6.64
GC content: 39.87
Gene sequence:
>474_bases GTGCGGAAGGTTTCTTCCGCGTTTTTTATGGAACTCCGATTCCAAACTTTCTTCTCGTTTCTTTTTTTTAGTTTTCTCTT ACTCACCACCTTTCACTGCTCCAAACAAAGTGACATAATACTTTCACAATACGAAACCGCACTCACCGAAGCCAACTCAC AAAACAGAAAACTCATCGTGGTCTTTGGTGCCGATTGGTGCCCCGACTGTCGGACATTAGATGGAATTTTTGCCAATCCT GAAACCAAAGCCATTTTAGATTCCCAATTTCTTGTGATGAAGGTAGATGTGGGTCGTTTTGACAAAAACTTAGGTCTAAA TGAAAGGTTGGGAAATCCCATCCAAAATGGAATTCCATCTCTGGTGGTTCTTTCCCCAAAAGGAGAGATCATCACTTCCA CAAAAGGTGGAGAATTTTCAAACGCGAGTCAAATGACAAAAGAACAAGTGTTAGAGTATTTATATAAATTGTAA
Upstream 100 bases:
>100_bases TTCCGAGAAACAATTGAAACGTGATTGGTTGTCTCTTTCGCATATTGAGAAAGACAAAAAAAGACAAGAAATCCTAAAAG AAATCGCAAAAAAGTAATCA
Downstream 100 bases:
>100_bases TCCTGGAACACAGGTTCTTACTGTGAAAGATTTATGATCGTTCATCCATTGTCTTCAAAGGCATTCAAATCGATACGATC AGCACTCGATCACAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Thiol-Disulfide Isomerase; Disulphide Isomerase; Thioredoxin Family Homolog; Thioredoxin Domain; Protein Disulfide Isomerase
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRKVSSAFFMELRFQTFFSFLFFSFLLLTTFHCSKQSDIILSQYETALTEANSQNRKLIVVFGADWCPDCRTLDGIFANP ETKAILDSQFLVMKVDVGRFDKNLGLNERLGNPIQNGIPSLVVLSPKGEIITSTKGGEFSNASQMTKEQVLEYLYKL
Sequences:
>Translated_157_residues MRKVSSAFFMELRFQTFFSFLFFSFLLLTTFHCSKQSDIILSQYETALTEANSQNRKLIVVFGADWCPDCRTLDGIFANP ETKAILDSQFLVMKVDVGRFDKNLGLNERLGNPIQNGIPSLVVLSPKGEIITSTKGGEFSNASQMTKEQVLEYLYKL >Mature_157_residues MRKVSSAFFMELRFQTFFSFLFFSFLLLTTFHCSKQSDIILSQYETALTEANSQNRKLIVVFGADWCPDCRTLDGIFANP ETKAILDSQFLVMKVDVGRFDKNLGLNERLGNPIQNGIPSLVVLSPKGEIITSTKGGEFSNASQMTKEQVLEYLYKL
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17785; Mature: 17785
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVSSAFFMELRFQTFFSFLFFSFLLLTTFHCSKQSDIILSQYETALTEANSQNRKLIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE VFGADWCPDCRTLDGIFANPETKAILDSQFLVMKVDVGRFDKNLGLNERLGNPIQNGIPS EECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCHHHCCCHHHCCCCC LVVLSPKGEIITSTKGGEFSNASQMTKEQVLEYLYKL EEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKVSSAFFMELRFQTFFSFLFFSFLLLTTFHCSKQSDIILSQYETALTEANSQNRKLIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEE VFGADWCPDCRTLDGIFANPETKAILDSQFLVMKVDVGRFDKNLGLNERLGNPIQNGIPS EECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCHHHCCCHHHCCCCC LVVLSPKGEIITSTKGGEFSNASQMTKEQVLEYLYKL EEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA