Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 183219643

GI number: 183219643

Start: 209299

End: 210312

Strand: Reverse

Name: yebA [C]

Synonym: LEPBI_I0218

Alternate gene names: 183219643

Gene position: 210312-209299 (Counterclockwise)

Preceding gene: 183219647

Following gene: 183219642

Centisome position: 5.84

GC content: 38.26

Gene sequence:

>1014_bases
ATGAAGAAAAAAATTAAAGAGATTACGTCTGTTTTTTCACAAGACAATCCGAAAATCAAGAAACAGATTGATAAGGTGAA
AGAAAAAGGTCACCAACGGATGACCATTCTTGTCATTCCTCATGGTTATGACAGTTCTTTCCACTTTCAAATTTCCCACT
TTACCATCCTATTTTTTTTAGGCCTCACTTTAGGTCTATTGAGTTTAGCAATTTTTGGAATTGTTCGCTCCAATAATACT
CAAACACAAATCAACCAACTCTCCAAAATATACGGAACTTATTTTGATACTTACATCACCCATGCGAACCAATTAGAAGA
AATGAAAGAAGAGTATTCTAAATTGAACGAAAACATGTTGGAACTCTTCACTTTGATTGATGGACAAGATGACGAACTTT
TAAAAATCCCAACGGAAGATTGGATTGAATCTTCCGCAATCGACACACTCCAAAAAGAAGAAAAAGAGGACAAACAATTA
GATGTGGGACGAAAATATCTAAATGAGATCTATGAACTCAGACGATTGAAACATCGAATGGACAATTACCAACGTTTGGT
GGAAGCCAATTTTCAATTTTTATACCAACGTTCAGATATTCTCTCTAGATCTCCCCTCTTCAATCCCATGTATTCGTATA
ATTTAACTTCTCCATTTGGAATGCGTAAGTCACCTACCACTGGTTACTGGGAATACCACGACGGTTTGGACATGGCAAAT
GCTACGGGTACACCAATATATGCTTCTGCACCTGGTCGTGTGGTTCGTGTCACTTATTCCAATGTTGGGTATGGCCACCA
TGTCATCATCCAACATGACTTCGGCTTTAGTACGTTATACGGTCACTGTTCTAGAATTTATGTAAGGTCAGGCCAAGAAG
TAAAAGCTGGGGAACAAATTGCAGAAGTAGGAGCCACTGGTAACGTAACAGGGCCTCACCTACATTATGAAATTTTCATT
TCGGAAGAAGGAAAAACCGATCCAGAACAGTACATGCAAGCTGGAGTTTACTGA

Upstream 100 bases:

>100_bases
AAGAATTCCAAAAACCAGTATGAAACCCAGAAACAGGGATTTCCACTTGACCCTGGAAAGGAATCGGAGCGTCTTATTTA
TGTAGGAATCGCGGTTCGTC

Downstream 100 bases:

>100_bases
TTGGCTAAAAAAACAAAAGCCGAGGATCCTAAAAAACGAATCATTACACTTCGTAAAGAAATTGGTCGTCATAATGATTT
GTATTACAAAGAAAATGCAC

Product: putative metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKKKIKEITSVFSQDNPKIKKQIDKVKEKGHQRMTILVIPHGYDSSFHFQISHFTILFFLGLTLGLLSLAIFGIVRSNNT
QTQINQLSKIYGTYFDTYITHANQLEEMKEEYSKLNENMLELFTLIDGQDDELLKIPTEDWIESSAIDTLQKEEKEDKQL
DVGRKYLNEIYELRRLKHRMDNYQRLVEANFQFLYQRSDILSRSPLFNPMYSYNLTSPFGMRKSPTTGYWEYHDGLDMAN
ATGTPIYASAPGRVVRVTYSNVGYGHHVIIQHDFGFSTLYGHCSRIYVRSGQEVKAGEQIAEVGATGNVTGPHLHYEIFI
SEEGKTDPEQYMQAGVY

Sequences:

>Translated_337_residues
MKKKIKEITSVFSQDNPKIKKQIDKVKEKGHQRMTILVIPHGYDSSFHFQISHFTILFFLGLTLGLLSLAIFGIVRSNNT
QTQINQLSKIYGTYFDTYITHANQLEEMKEEYSKLNENMLELFTLIDGQDDELLKIPTEDWIESSAIDTLQKEEKEDKQL
DVGRKYLNEIYELRRLKHRMDNYQRLVEANFQFLYQRSDILSRSPLFNPMYSYNLTSPFGMRKSPTTGYWEYHDGLDMAN
ATGTPIYASAPGRVVRVTYSNVGYGHHVIIQHDFGFSTLYGHCSRIYVRSGQEVKAGEQIAEVGATGNVTGPHLHYEIFI
SEEGKTDPEQYMQAGVY
>Mature_337_residues
MKKKIKEITSVFSQDNPKIKKQIDKVKEKGHQRMTILVIPHGYDSSFHFQISHFTILFFLGLTLGLLSLAIFGIVRSNNT
QTQINQLSKIYGTYFDTYITHANQLEEMKEEYSKLNENMLELFTLIDGQDDELLKIPTEDWIESSAIDTLQKEEKEDKQL
DVGRKYLNEIYELRRLKHRMDNYQRLVEANFQFLYQRSDILSRSPLFNPMYSYNLTSPFGMRKSPTTGYWEYHDGLDMAN
ATGTPIYASAPGRVVRVTYSNVGYGHHVIIQHDFGFSTLYGHCSRIYVRSGQEVKAGEQIAEVGATGNVTGPHLHYEIFI
SEEGKTDPEQYMQAGVY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=119, Percent_Identity=38.655462184874, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789099, Length=86, Percent_Identity=41.8604651162791, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082174, Length=100, Percent_Identity=37, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38904; Mature: 38904

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIKEITSVFSQDNPKIKKQIDKVKEKGHQRMTILVIPHGYDSSFHFQISHFTILFFL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHH
GLTLGLLSLAIFGIVRSNNTQTQINQLSKIYGTYFDTYITHANQLEEMKEEYSKLNENML
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFTLIDGQDDELLKIPTEDWIESSAIDTLQKEEKEDKQLDVGRKYLNEIYELRRLKHRM
HHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNYQRLVEANFQFLYQRSDILSRSPLFNPMYSYNLTSPFGMRKSPTTGYWEYHDGLDMAN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
ATGTPIYASAPGRVVRVTYSNVGYGHHVIIQHDFGFSTLYGHCSRIYVRSGQEVKAGEQI
CCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHEEEEECCCCCHHHHHH
AEVGATGNVTGPHLHYEIFISEEGKTDPEQYMQAGVY
HHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKKKIKEITSVFSQDNPKIKKQIDKVKEKGHQRMTILVIPHGYDSSFHFQISHFTILFFL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHH
GLTLGLLSLAIFGIVRSNNTQTQINQLSKIYGTYFDTYITHANQLEEMKEEYSKLNENML
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFTLIDGQDDELLKIPTEDWIESSAIDTLQKEEKEDKQLDVGRKYLNEIYELRRLKHRM
HHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNYQRLVEANFQFLYQRSDILSRSPLFNPMYSYNLTSPFGMRKSPTTGYWEYHDGLDMAN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
ATGTPIYASAPGRVVRVTYSNVGYGHHVIIQHDFGFSTLYGHCSRIYVRSGQEVKAGEQI
CCCCCEEECCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHEEEEECCCCCHHHHHH
AEVGATGNVTGPHLHYEIFISEEGKTDPEQYMQAGVY
HHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]