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The map label for this gene is 183219633

Identifier: 183219633

GI number: 183219633

Start: 201514

End: 202146

Strand: Reverse

Name: 183219633

Synonym: LEPBI_I0208

Alternate gene names: NA

Gene position: 202146-201514 (Counterclockwise)

Preceding gene: 183219635

Following gene: 183219629

Centisome position: 5.62

GC content: 43.6

Gene sequence:

>633_bases
ATGGAAAAGAAAAAACGAGTCACTGTTCCGAAAAAAGCCCCACAACCACCAGTCATGGGTAGGAAACGAGACCCTTCTCT
GGATGCCTTAATTTTGAATGCTACCTTAGAGATGTTAGCCGAAGAAGGCTTTGATGGAATGACGATGGATCAAATTGCGA
CCAAAGTGGGAACTGGAAAGGCTGCTTGTTACAGACGTTGGCCGTCCAAAGTCAAACTTGTCAAAGATGCTTTGATTTGG
ATGAATCGGAACCAATTAGAACTCGAAAAAATTCCCGATACAGGTTCGCTTCGCAATGATTTTTTAGCCATCCTCAAACC
CCATTCGATGGAAGAGGCCAATGCAAAACTTAGAGTACTCGGAGGTCTCGGTACTTTCTGGTTAGATGAAGAAATTGAAA
AAAAGGGGATTACGGAAATTTTTGGTCCCTGGACAGAAGTGAACCGAACCCTCATCCAAAGGGCCATGGAACGTGGGGAA
ATTTCTAAAAAGGCAAATGTCGAACTTGTTTGTAAAGTATTAAACTCCATGGCAACCTACCGAGCTCTTATCGAACGTAA
ACCTCCCGACAAAGCTCTGTTTATCGCACTCATTGACCAAGTGGTGATGCCTGCCTTAAAAATTCCCGGTTAA

Upstream 100 bases:

>100_bases
GACATTGAAAATCAAGAATTCTTTGGTCAATAAAAAAATTTGGTAAAAAGATAATTCCCTTTGATTTCAAAATCATTTTT
TATGTTATAATCAGAATCGA

Downstream 100 bases:

>100_bases
ATGCATTGGGGCGCCTCGCATCGGTTAGTTGATCTTTGTCTTTTACTAACATTGACCGCGTTATCCGCTCCAATCTTTCC
AATGATATTGAATTTAAAGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMDQIATKVGTGKAACYRRWPSKVKLVKDALIW
MNRNQLELEKIPDTGSLRNDFLAILKPHSMEEANAKLRVLGGLGTFWLDEEIEKKGITEIFGPWTEVNRTLIQRAMERGE
ISKKANVELVCKVLNSMATYRALIERKPPDKALFIALIDQVVMPALKIPG

Sequences:

>Translated_210_residues
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMDQIATKVGTGKAACYRRWPSKVKLVKDALIW
MNRNQLELEKIPDTGSLRNDFLAILKPHSMEEANAKLRVLGGLGTFWLDEEIEKKGITEIFGPWTEVNRTLIQRAMERGE
ISKKANVELVCKVLNSMATYRALIERKPPDKALFIALIDQVVMPALKIPG
>Mature_210_residues
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMDQIATKVGTGKAACYRRWPSKVKLVKDALIW
MNRNQLELEKIPDTGSLRNDFLAILKPHSMEEANAKLRVLGGLGTFWLDEEIEKKGITEIFGPWTEVNRTLIQRAMERGE
ISKKANVELVCKVLNSMATYRALIERKPPDKALFIALIDQVVMPALKIPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23624; Mature: 23624

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMDQIATKVGTGK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
AACYRRWPSKVKLVKDALIWMNRNQLELEKIPDTGSLRNDFLAILKPHSMEEANAKLRVL
HHHHHHCHHHHHHHHHHHHHCCCCCEEHEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
GGLGTFWLDEEIEKKGITEIFGPWTEVNRTLIQRAMERGEISKKANVELVCKVLNSMATY
ECCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RALIERKPPDKALFIALIDQVVMPALKIPG
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMDQIATKVGTGK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
AACYRRWPSKVKLVKDALIWMNRNQLELEKIPDTGSLRNDFLAILKPHSMEEANAKLRVL
HHHHHHCHHHHHHHHHHHHHCCCCCEEHEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEE
GGLGTFWLDEEIEKKGITEIFGPWTEVNRTLIQRAMERGEISKKANVELVCKVLNSMATY
ECCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RALIERKPPDKALFIALIDQVVMPALKIPG
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]